Clone BO15360 Report

Search the DGRC for BO15360

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:60
Vector:pDNR-Dual
Associated Gene/TranscriptCG14544-RA
Protein status:BO15360.pep: validated full length
Sequenced Size:985

Clone Sequence Records

BO15360.3prime Sequence

728 bp (699 high quality bases) assembled on 2006-06-16

> BO15360.3prime
ATGGTCTAGAAAGCTTGCGGCCTTGGGTATATTTGGTGGCAAAGTGGCGA
AGGTGAGGAAGCCCGTGTGACCGGGCAGGGTTTGGGGATTACTGGAGGTC
AGGTACTTCTTCACCTCCTTTGGCGCCTTGCTCTCCAAGGCATTTGTTGC
CGCCGTCGTCTCATCGGTTTTGGGCAATTTAAGGAACTCAAGATCGATGA
CGGGCAGCGTGCGCGTCTTCACCACGTTCTCCTGCTGCAGCACCTCCAAG
GAAACAATCTCGTTGAAGCCCAGCTTGGTTAGCTCTTGGATGCAGCGCTG
CGACTGCTCAATGCAGGGCGAAAACGAACAGAAACGACCTCCGGACAGCT
TCAACGCCTTGAAGGCGTGCGGCACAGCGAGATCGGGCGCGGGCAGATCC
AAGAAGACCGCATCGGCCTTTCCGTCCAGTTCCGCACCAAAGCCCAGATT
GCAAACGTCCCGGTGATAGACGGTGACGAAGTCAGCGATACCATGTCGCC
GGAACTCGTCGCGTGCCTGATCCGCTCGAGCTTCGTGGAAATCGAAGGTG
TGCAGGTGGCCAGTGGGTTTCAGTGCTCTTAGAAAGTAATGCGATAGAGA
CCCCGATCCCGTGCCCGACTCAACCACCACGGCACCGGGTCGGACCTCCA
GCTGGTGGATAATCATACTAATATCCGGCGTGTAAATAATCTGTGTGCGG
TGGGGCAGTGTTTGTGTCCAGAGTTCCG

BO15360.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-PA 954 CG14544-RA 242..951 728..19 3550 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 1031 CG14544-RB 314..1023 728..19 3550 100 Minus
CG14544-RA 1069 CG14544-RA 326..1035 728..19 3550 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:15:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26059875..26060262 728..341 1940 100 Minus
3R 32079331 3R 26060936..26061259 342..19 1620 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:15:27 has no hits.

BO15360.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:07 Download gff for BO15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 242..954 16..728 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:35 Download gff for BO15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 242..954 16..728 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:44:27 Download gff for BO15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 326..1035 19..728 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:57:32 Download gff for BO15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 326..1035 19..728 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:57:32 Download gff for BO15360.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 26059875..26060261 342..728 100 -> Minus
3R 26060937..26061258 20..341 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:44:27 Download gff for BO15360.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21885597..21885983 342..728 100 -> Minus
arm_3R 21886659..21886980 20..341 100 <- Minus

BO15360.5prime Sequence

851 bp (719 high quality bases) assembled on 2006-06-16

> BO15360.5prime
GAAGTTATCAGTCGACATGAGTTTTCTGAAACCCAAGACCCACATAGAAA
AGGGCGATGTGGTCATCCTTTATTTGAGTGTCAGTTCCATGCATGCCATC
GAAGCGGTGCCCGAAATAGTGAACAAAAAGGGCGAAACAATACCGCATAT
TTTTCAGACCAATTATGGATCGCTAAAAGTTGAAAATATCATCGGCGTGG
AGTATGGTAGTAAAGTGGAGCTCTCCAAGGGCTGGGCCCATGTCCTTCAG
CCGACGCCGGAACTCTGGACACAAACACTGCCCCACCGCACACAGATTAT
TTACACGCCGGATATTAGTATGATTATCCACCAGCTGGAGGTCCGACCCG
GTGCCGTGGTGGTTGAGTCGGGCACGGGATCGGGGTCTCTATCGCATTAC
TTTCTAAGAGCACTGAAACCCACTGGCCACCTGCACACCTTCGATTTCCA
CGAAGCTCGAGCGGATCAGGCACGCGACGAGTTCCGGCGACATGGTATCG
CTGACTTCGTCACCGTCTATCACCGGGACGTTTGCAATCTGGGCTTTGGT
GCGGAACTGGACGGAAAGGCCGATGCGGTCTTCTTGGATCTGCCCGCGCC
CGATCTCGCTGTGCCGCACGCCTTCAAGGCGTTGAAGCTGTCCGGAGGTC
GTTTCTGTTCGTTTTCGCCCTGCATTGAGCAGTCGCAGCGCTGCATCCAA
GAGCTAACCAAGCTGGGCTTCAACGAGATTGTTTCCTTGGAGGTGCTGCA
GCAGGAGAACGTGGTGAAGACGCGCACGCTGCCCGTCATCGATCTTGAGT
TCCTTTAATTGCCCAAAACCGATGAAACGACGGCGGCAACAAATGCCTTG
G

BO15360.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-PA 954 CG14544-RA 1..835 17..851 4125 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 1031 CG14544-RB 71..907 15..851 4155 99.8 Plus
CG14544-RA 1069 CG14544-RA 83..919 15..851 4155 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26059803..26060262 186..645 2300 100 Plus
3R 32079331 3R 26060936..26061143 644..851 1010 99 Plus
3R 32079331 3R 26059578..26059748 15..185 855 100 Plus
Blast to na_te.dros performed on 2015-02-13 09:15:57 has no hits.

BO15360.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:08 Download gff for BO15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 1..835 17..851 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:36 Download gff for BO15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 1..835 17..851 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:28:57 Download gff for BO15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 83..919 15..851 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:02:27 Download gff for BO15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 83..919 15..851 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:02:27 Download gff for BO15360.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26059578..26059748 15..185 100 -> Plus
3R 26059803..26060261 186..644 100 -> Plus
3R 26060937..26061143 645..851 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:28:57 Download gff for BO15360.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21885300..21885470 15..185 100 -> Plus
arm_3R 21885525..21885983 186..644 100 -> Plus
arm_3R 21886659..21886865 645..851 99   Plus

BO15360.complete Sequence

985 bp assembled on 2007-10-17

GenBank Submission: FJ633430

> BO15360.complete
GAAGTTATCAGTCGACATGAGTTTTCTGAAACCCAAGACCCACATAGAAA
AGGGCGATGTGGTCATCCTTTATTTGAGTGTCAGTTCCATGCATGCCATC
GAAGCGGTGCCCGAAATAGTGAACAAAAAGGGCGAAACAATACCGCATAT
TTTTCAGACCAATTATGGATCGCTAAAAGTTGAAAATATCATCGGCGTGG
AGTATGGTAGTAAAGTGGAGCTCTCCAAGGGCTGGGCCCATGTCCTTCAG
CCGACGCCGGAACTCTGGACACAAACACTGCCCCACCGCACACAGATTAT
TTACACGCCGGATATTAGTATGATTATCCACCAGCTGGAGGTCCGACCCG
GTGCCGTGGTGGTTGAGTCGGGCACGGGATCGGGGTCTCTATCGCATTAC
TTTCTAAGAGCACTGAAACCCACTGGCCACCTGCACACCTTCGATTTCCA
CGAAGCTCGAGCGGATCAGGCACGCGACGAGTTCCGGCGACATGGTATCG
CTGACTTCGTCACCGTCTATCACCGGGACGTTTGCAATCTGGGCTTTGGT
GCGGAACTGGACGGAAAGGCCGATGCGGTCTTCTTGGATCTGCCCGCGCC
CGATCTCGCTGTGCCGCACGCCTTCAAGGCGTTGAAGCTGTCCGGAGGTC
GTTTCTGTTCGTTTTCGCCCTGCATTGAGCAGTCGCAGCGCTGCATCCAA
GAGCTAACCAAGCTGGGCTTCAACGAGATTGTTTCCTTGGAGGTGCTGCA
GCAGGAGAACGTGGTGAAGACGCGCACGCTGCCCGTCATCGATCTTGAGT
TCCTTAAATTGCCCAAAACCGATGAGACGACGGCGGCAACAAATGCCTTG
GAGAGCAAGGCGCCAAAGGAGGTGAAGAAGTACCTGACCTCCAGTAATCC
CCAAACCCTGCCCGGTCACACGGGCTTCCTCACCTTCGCCACTTTGCCAC
CAAATATACCCAAGGCCGCAAGCTTTCTAGACCAT

BO15360.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 954 CG14544-PB 1..951 17..967 4755 100 Plus
CG14544-RA 954 CG14544-PA 1..951 17..967 4755 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 1031 CG14544-RB 71..1023 15..967 4765 100 Plus
CG14544-RA 1069 CG14544-RA 83..1035 15..967 4765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:28:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26059803..26060262 186..645 2300 100 Plus
3R 32079331 3R 26060936..26061259 644..967 1620 100 Plus
3R 32079331 3R 26059578..26059748 15..185 855 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:28:55 has no hits.

BO15360.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:51 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 1..954 17..970 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:16:18 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 71..1023 15..967 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:06 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 85..1035 17..969 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:29:26 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 73..1023 17..969 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:53 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 85..1035 17..969 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:08:53 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26059580..26059748 17..185 100 -> Plus
3R 26059803..26060261 186..644 100 -> Plus
3R 26060937..26061259 645..969 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:06 Download gff for BO15360.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21885302..21885470 17..185 100 -> Plus
arm_3R 21885525..21885983 186..644 100 -> Plus
arm_3R 21886659..21886981 645..969 99   Plus

BO15360.pep Sequence

Translation from 16 to 985

> BO15360.pep
MSFLKPKTHIEKGDVVILYLSVSSMHAIEAVPEIVNKKGETIPHIFQTNY
GSLKVENIIGVEYGSKVELSKGWAHVLQPTPELWTQTLPHRTQIIYTPDI
SMIIHQLEVRPGAVVVESGTGSGSLSHYFLRALKPTGHLHTFDFHEARAD
QARDEFRRHGIADFVTVYHRDVCNLGFGAELDGKADAVFLDLPAPDLAVP
HAFKALKLSGGRFCSFSPCIEQSQRCIQELTKLGFNEIVSLEVLQQENVV
KTRTLPVIDLEFLKLPKTDETTAATNALESKAPKEVKKYLTSSNPQTLPG
HTGFLTFATLPPNIPKAASFLDH

BO15360.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-PB 317 CG14544-PB 1..317 1..317 1651 100 Plus
CG14544-PA 317 CG14544-PA 1..317 1..317 1651 100 Plus