Clone BO15375 Report

Search the DGRC for BO15375

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG4995-RC
Protein status:BO15375.pep: full length peptide match
Sequenced Size:1114

Clone Sequence Records

BO15375.3prime Sequence

862 bp (802 high quality bases) assembled on 2006-06-16

> BO15375.3prime
ATGGTCTAGAAAGCTTGCTTTTAAATTACAATCGGATGCTAAACGTGCTT
TAGATTCTTTGGGAATGTTGATTGTGCTACTCGTGTAATGGCTGTGAACG
ACATCCTTTGGCGTGGACACATACTGATGGGACATGGCATTGTCCGTGAT
TATTTTGCGCACCACTTCCTCAACCGTTGGCGCCGTCGCCTCCAAGTCCG
CTTGGCTCTTGTTGTCTAGGTTGACGAGAGTCAGTGGCTGATCGGAATGC
ATTACGGAATCCATGCCGCCCTTGGCATTGCAGATGTCCAGTACCCAGGA
CACCACAAAGAAGCAGGCGGCGTTCATCGGAAAAGCCCGGATCAAGGTGG
AGTTTAGACCGCGAAAGAAGTACTGCGGTCCCTCGTTCCTAAAGCCCTTC
ATGGCACAGTCGATGAAGCCATTGTATTTGGCATTCGCGCCCAGGGCATC
GGCCTGCATGTGGGTCTTCACCACGTCGATGGGGTAGCACGCCAACCAGG
ACGACATGCCAGCACATCCGCCGGCCATTAGAGTGTACGCAACGCCGGGT
GTCTCCACTTGACGCATAAGGTACTCGAAGGACACAAAGTAGCTGGCAAA
GCCTGGAATATCCCTTAGAATGGTGGCTGTTAATCCCTTGAAGGCACCTC
TGATACCCTCCGTTTTTACTATGTACTTGAGGCAGTGAATGGGTCCAGTG
AACTTGATGCCGCTATCAACCTGCGTGGACAATTGGAGTCGCGTTTTGGC
CAACTCCATGGGCGCACACACGAAACCCTGAGCGACACCAGCGATGGAGC
CAGCGAAGAAGTGTGACGTCAGCGAATTGGGGTCATTGGACAAGCGTTGC
ACGTTTCCGTTA

BO15375.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-PA 1200 CG4995-RA 356..1197 860..19 4185 99.8 Minus
CG4995-PC 1083 CG4995-RC 239..1080 860..19 4185 99.8 Minus
CG4995-PB 1200 CG4995-RB 356..1197 860..19 4185 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1246 CG4995-RD 377..1218 860..19 4195 99.9 Minus
CG4995-RB 1431 CG4995-RB 562..1403 860..19 4195 99.9 Minus
CG4995-RC 1205 CG4995-RC 336..1177 860..19 4195 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10324375..10324962 606..19 2940 100 Minus
2L 23513712 2L 10324052..10324310 860..602 1280 99.6 Minus
Blast to na_te.dros performed on 2015-01-31 10:45:03 has no hits.

BO15375.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:24 Download gff for BO15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PC 238..1083 15..861 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:59 Download gff for BO15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PB 355..1200 15..861 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:42:56 Download gff for BO15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 335..1182 14..861 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:50:40 Download gff for BO15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 335..1182 14..861 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:50:40 Download gff for BO15375.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10324051..10324309 603..861 99 -> Minus
2L 10324379..10324967 14..602 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:42:56 Download gff for BO15375.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10324051..10324309 603..861 99 -> Minus
arm_2L 10324379..10324967 14..602 99   Minus

BO15375.5prime Sequence

874 bp (815 high quality bases) assembled on 2006-06-16

> BO15375.5prime
GAAGTTATCAGTCGACATGGTTGTGGATTTCGTAGCCGGACTCCTGGGCG
GAGCTGCTGGTGTTCTTGTCGGCCATCCCTTCGATACCGTGAAGGTCCAC
CTGCAAACCGATGATCCTCGCAATCCCAAGTACAAAGGCACATTCCACTG
CTTCCGGACGATAGTGCAAAGAGACAAATTCATAGGATTATATCGTGGTA
TCAGCAGTCCCATGGGAGGAATCGGATTGGTGAACGCCATCGTTTTCGGG
GTCTACGGAAACGTGCAACGCTTGTCCAATGACCCCAATTCGCTGACGTC
ACACTTCTTCGCTGGCTCCATCGCTGGTGTCGCCCAGGGTTTCGTGTGTG
CGCCCATGGAGTTGGCCAAAACGCGACTCCAATTGTCCACGCAGGTTGAT
AGCGGCATCAAGTTCACTGGACCCATTCACTGCCTCAAGTACATAGTAAA
AACGGAGGGTATCAGAGGTGCCTTCAAGGGATTAACAGCCACCATTCTAA
GGGATATTCCAGGCTTTGCCAGCTACTTTGTGTCCTTCGAGTACCTTATG
CGTCAAGTGGAGACACCCGGCGTTGCGTACACTCTAATGGCCGGCGGATG
TGCTGGCATGTCGTCCTGGTTGGCGTGCTACCCCATCGACGTGGTGAAGA
CCCACATGCAGGCCGATGCCCTGGGCGCGAATGCCAAATACAATGGCTTC
ATCGACTGTGCCATGAANGGCTTTAGGAACGAGGGACCGCAGTACTTCTT
TCGCGGTCTAAACTCCACCTTGATCCGGGCTTTTCCGATGAACGCCGCCT
GCTTCTTTGTGGTGTCCTGGGTACTGGACATCTGCAATGCCAAAGGCGGC
ATGGATTCCGTAATGCATTCCGAT

BO15375.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-PA 1200 CG4995-RA 118..975 17..874 4246 99.7 Plus
CG4995-PC 1083 CG4995-RC 1..858 17..874 4246 99.7 Plus
CG4995-PB 1200 CG4995-RB 118..975 17..874 4246 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:40:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1246 CG4995-RD 139..996 17..874 4264 99.8 Plus
CG4995-RB 1431 CG4995-RB 324..1181 17..874 4264 99.8 Plus
CG4995-RC 1205 CG4995-RC 98..955 17..874 4264 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10323847..10324310 50..513 2320 100 Plus
2L 23513712 2L 10324375..10324740 509..874 1804 99.5 Plus
Blast to na_te.dros performed on 2015-02-09 22:40:20 has no hits.

BO15375.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:25 Download gff for BO15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PC 1..858 17..874 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:01 Download gff for BO15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PB 118..975 17..874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:22:26 Download gff for BO15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..955 17..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:47:23 Download gff for BO15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..955 17..874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:47:23 Download gff for BO15375.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10323746..10323779 17..50 100 -> Plus
2L 10323848..10324309 51..512 100 -> Plus
2L 10324379..10324740 513..874 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:22:26 Download gff for BO15375.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10323746..10323779 17..50 100 -> Plus
arm_2L 10323848..10324309 51..512 100 -> Plus
arm_2L 10324379..10324740 513..874 99   Plus

BO15375.complete Sequence

1114 bp (1114 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633435

> BO15375.complete
GAAGTTATCAGTCGACATGGTTGTGGATTTCGTAGCCGGACTCCTGGGCG
GAGCTGCTGGTGTTCTTGTCGGCCATCCCTTCGATACCGTGAAGGTCCAC
CTGCAAACCGATGATCCTCGCAATCCCAAGTACAAAGGCACATTCCACTG
CTTCCGGACGATAGTGCAAAGAGACAAATTCATAGGATTATATCGTGGTA
TCAGCAGTCCCATGGGAGGAATCGGATTGGTGAACGCCATCGTTTTCGGG
GTCTACGGAAACGTGCAACGCTTGTCCAATGACCCCAATTCGCTGACGTC
ACACTTCTTCGCTGGCTCCATCGCTGGTGTCGCCCAGGGTTTCGTGTGTG
CGCCCATGGAGTTGGCCAAAACGCGACTCCAATTGTCCACGCAGGTTGAT
AGCGGCATCAAGTTCACTGGACCCATTCACTGCCTCAAGTACATAGTAAA
AACGGAGGGTATCAGAGGTGCCTTCAAGGGATTAACAGCCACCATTCTAA
GGGATATTCCAGGCTTTGCCAGCTACTTTGTGTCCTTCGAGTACCTTATG
CGTCAAGTGGAGACACCCGGCGTTGCGTACACTCTAATGGCCGGCGGATG
TGCTGGCATGTCGTCCTGGTTGGCGTGCTACCCCATCGACGTGGTGAAGA
CCCACATGCAGGCCGATGCCCTGGGCGCGAATGCCAAATACAATGGCTTC
ATCGACTGTGCCATGAAGGGCTTTAGGAACGAGGGACCGCAGTACTTCTT
TCGCGGTCTAAACTCCACCTTGATCCGGGCTTTTCCGATGAACGCCGCCT
GCTTCTTTGTGGTGTCCTGGGTACTGGACATCTGCAATGCCAAGGGCGGC
ATGGATTCCGTAATGCATTCCGATCAGCCACTGACTCTCGTCAACCTAGA
CAACAAGAGCCAAGCGGACTTGGAGGCGACGGCGCCAACGGTTGAGGAAG
TGGTGCGCAAAATAATCACGGACAATGCCATGTCCCATCAGTATGTGTCC
ACGCCAAAGGATGTCGTTCACAGCCATTACACGAGTAGCACAATCAACAT
TCCCAAAGAATCTAAAGCACGTTTAGCATCCGATTGTAATTTAAAAGCAA
GCTTTCTAGACCAT

BO15375.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1083 CG4995-PD 1..1080 17..1096 5400 100 Plus
CG4995-RB 1200 CG4995-PB 118..1197 17..1096 5400 100 Plus
CG4995-RC 1083 CG4995-PC 1..1080 17..1096 5400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1246 CG4995-RD 139..1218 17..1096 5400 100 Plus
CG4995-RB 1431 CG4995-RB 324..1403 17..1096 5400 100 Plus
CG4995-RC 1205 CG4995-RC 98..1177 17..1096 5400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10324375..10324962 509..1096 2940 100 Plus
2L 23513712 2L 10323847..10324310 50..513 2320 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:48:03 has no hits.

BO15375.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:08 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RB 118..1200 17..1100 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:57 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RB 324..1408 17..1101 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:08 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..1173 17..1092 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:08 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RB 324..1408 17..1101 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:04:55 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..1173 17..1092 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:04:55 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10323746..10323779 17..50 100 -> Plus
2L 10323848..10324309 51..512 100 -> Plus
2L 10324379..10324958 513..1092 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:08 Download gff for BO15375.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10323746..10323779 17..50 100 -> Plus
arm_2L 10323848..10324309 51..512 100 -> Plus
arm_2L 10324379..10324958 513..1092 100   Plus

BO15375.pep Sequence

Translation from 16 to 1114

> BO15375.pep
MVVDFVAGLLGGAAGVLVGHPFDTVKVHLQTDDPRNPKYKGTFHCFRTIV
QRDKFIGLYRGISSPMGGIGLVNAIVFGVYGNVQRLSNDPNSLTSHFFAG
SIAGVAQGFVCAPMELAKTRLQLSTQVDSGIKFTGPIHCLKYIVKTEGIR
GAFKGLTATILRDIPGFASYFVSFEYLMRQVETPGVAYTLMAGGCAGMSS
WLACYPIDVVKTHMQADALGANAKYNGFIDCAMKGFRNEGPQYFFRGLNS
TLIRAFPMNAACFFVVSWVLDICNAKGGMDSVMHSDQPLTLVNLDNKSQA
DLEATAPTVEEVVRKIITDNAMSHQYVSTPKDVVHSHYTSSTINIPKESK
ARLASDCNLKASFLDH

BO15375.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:36:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-PD 360 CG4995-PD 1..360 1..360 1889 100 Plus
CG4995-PC 360 CG4995-PC 1..360 1..360 1889 100 Plus
CG4995-PB 399 CG4995-PB 40..399 1..360 1889 100 Plus
CG4995-PA 399 CG4995-PA 40..399 1..360 1889 100 Plus
CG3476-PA 299 CG3476-PA 15..299 2..275 403 37.4 Plus