Clone BO15377 Report

Search the DGRC for BO15377

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG31221-RA
Protein status:BO15377.pep: validated full length
Sequenced Size:691

Clone Sequence Records

BO15377.3prime Sequence

689 bp (688 high quality bases) assembled on 2006-06-16

> BO15377.3prime
ATGGTCTAGAAAGCTTGCGTCGAGGAAGCCGGTGTTGACCAGCTTCTCCA
AGAAGAACTTCACATCGCCCAGCTCCGAGTCCTTGATGCCCAGCGACTTC
AGCATGCCCAGATCCCCGTTCTCCACCGCCATGAAAACCGAGCGCAAGTG
TTCCAGGTCCGATCTCATTAGATGAAGGGCAGCTCCAAAATCCTCAATCG
TTTGCGACTCACTCAACGCGATGGCGACCTTCTCGACTCCGCCGAGAGGT
GAAAGGGCATCACGTGCCTTGCTGCCGAAAAGTTTTTCCAGGTAATTGGG
TCCGTGGGAGGCGATCAGGCTCTGGAGGAAGGATGCGGTCTCCTCGACCG
GCGGCCGCTTGGCAGCCGTACATAGACGCATATCCTCATCGTATCCGTCA
GAGCAATCGGGTGCACCATCGCATAAATATTGGATGGAAATGCAATTACC
ATCCCCGGGACACTTGAAGGGCTCATACGGATGACAGGCTTCGCTCCGCT
TCACGATGGGATTGGCCATGTGCCCGTACAAACGACTCAAATCGATGGCC
ATGGTGGTCGTGGTGGTCTGCAGGAGGAGCAGACAGACGGCGAATGATGG
CCACATGCTGAGGTGGTGCTGACGCGGCTGCTGATGATGATGATGATGGT
GGTGGTCCATTGCCAGGAAGGACATGTCGACTGATAACT

BO15377.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-PA 660 CG31221-RA 1..657 675..19 3285 100 Minus
CG31221-PB 660 CG31221-RB 1..657 675..19 3285 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:38:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-RC 4352 CG31221-RC 649..1305 675..19 3285 100 Minus
CG31221-RB 1633 CG31221-RB 644..1300 675..19 3285 100 Minus
CG31221-RA 4352 CG31221-RA 649..1305 675..19 3285 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:38:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19454066..19454265 363..164 1000 100 Minus
3R 32079331 3R 19416205..19416388 675..492 920 100 Minus
3R 32079331 3R 19457118..19457264 165..19 735 100 Minus
3R 32079331 3R 19440702..19440831 492..363 650 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:38:51 has no hits.

BO15377.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:26 Download gff for BO15377.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-PB 1..660 16..675 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:02 Download gff for BO15377.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-PB 1..660 16..675 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:12:46 Download gff for BO15377.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-RA 645..1305 19..681 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:06:07 Download gff for BO15377.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-RA 645..1305 19..681 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:06:07 Download gff for BO15377.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 19416201..19416388 492..681 98 -> Minus
3R 19440703..19440831 363..491 100 -> Minus
3R 19454067..19454265 164..362 100 -> Minus
3R 19457120..19457264 19..163 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:12:46 Download gff for BO15377.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15241923..15242110 492..681 98 -> Minus
arm_3R 15266425..15266553 363..491 100 -> Minus
arm_3R 15279789..15279987 164..362 100 -> Minus
arm_3R 15282842..15282986 19..163 100   Minus

BO15377.5prime Sequence

689 bp (688 high quality bases) assembled on 2006-06-16

> BO15377.5prime
GAAGTTATCAGTCGACATGTCCTTCCTGGCAATGGACCACCACCATCATC
ATCATCATCAGCAGCCGCGTCAGCACCACCTCAGCATGTGGCCATCATTC
GCCGTCTGTCTGCTCCTCCTGCAGACCACCACGACCACCATGGCCATCGA
TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCATCGTGAAGCGGAGCG
AAGCCTGTCATCCGTATGAGCCCTTCAAGTGTCCCGGGGATGGTAATTGC
ATTTCCATCCAATATTTATGCGATGGTGCACCCGATTGCTCTGACGGATA
CGATGAGGATATGCGTCTATGTACGGCTGCCAAGCGGCCGCCGGTCGAGG
AGACCGCATCCTTCCTCCAGAGCCTGATCGCCTCCCACGGACCCAATTAC
CTGGAAAAACTTTTCGGCAGCAAGGCACGTGATGCCCTTTCACCTCTCGG
CGGAGTCGAGAAGGTCGCCATCGCGTTGAGTGAGTCGCAAACGATTGAGG
ATTTTGGAGCTGCCCTTCATCTAATGAGATCGGACCTGGAACACTTGCGC
TCGGTTTTCATGGCGGTGGAGAACGGGGATCTGGGCATGCTGAAGTCGCT
GGGCATCAAGGACTCGGAGCTGGGCGATGTGAAGTTCTTCTTGGAGAAGC
TGGTCAACACCGGCTTCCTCGACGCAAGCTTTCTAGACC

BO15377.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-PA 660 CG31221-RA 1..657 17..673 3285 100 Plus
CG31221-PB 660 CG31221-RB 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-RC 4352 CG31221-RC 649..1305 17..673 3285 100 Plus
CG31221-RB 1633 CG31221-RB 644..1300 17..673 3285 100 Plus
CG31221-RA 4352 CG31221-RA 649..1305 17..673 3285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19454066..19454265 329..528 1000 100 Plus
3R 32079331 3R 19416205..19416388 17..200 920 100 Plus
3R 32079331 3R 19457118..19457264 527..673 735 100 Plus
3R 32079331 3R 19440702..19440831 200..329 650 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:09:47 has no hits.

BO15377.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:28 Download gff for BO15377.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-PB 1..660 17..676 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:04 Download gff for BO15377.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-PB 1..660 17..676 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:44:20 Download gff for BO15377.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-RA 645..1305 11..673 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:07:13 Download gff for BO15377.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31221-RA 645..1305 11..673 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:07:13 Download gff for BO15377.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 19416201..19416388 11..200 98 -> Plus
3R 19440703..19440831 201..329 100 -> Plus
3R 19454067..19454265 330..528 100 -> Plus
3R 19457120..19457264 529..673 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:44:20 Download gff for BO15377.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15241923..15242110 11..200 98 -> Plus
arm_3R 15266425..15266553 201..329 100 -> Plus
arm_3R 15279789..15279987 330..528 100 -> Plus
arm_3R 15282842..15282986 529..673 100   Plus

BO15377.complete Sequence

691 bp (691 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633436

> BO15377.complete
GAAGTTATCAGTCGACATGTCCTTCCTGGCAATGGACCACCACCATCATC
ATCATCATCAGCAGCCGCGTCAGCACCACCTCAGCATGTGGCCATCATTC
GCCGTCTGTCTGCTCCTCCTGCAGACCACCACGACCACCATGGCCATCGA
TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCATCGTGAAGCGGAGCG
AAGCCTGTCATCCGTATGAGCCCTTCAAGTGTCCCGGGGATGGTAATTGC
ATTTCCATCCAATATTTATGCGATGGTGCACCCGATTGCTCTGACGGATA
CGATGAGGATATGCGTCTATGTACGGCTGCCAAGCGGCCGCCGGTCGAGG
AGACCGCATCCTTCCTCCAGAGCCTGATCGCCTCCCACGGACCCAATTAC
CTGGAAAAACTTTTCGGCAGCAAGGCACGTGATGCCCTTTCACCTCTCGG
CGGAGTCGAGAAGGTCGCCATCGCGTTGAGTGAGTCGCAAACGATTGAGG
ATTTTGGAGCTGCCCTTCATCTAATGAGATCGGACCTGGAACACTTGCGC
TCGGTTTTCATGGCGGTGGAGAACGGGGATCTGGGCATGCTGAAGTCGCT
GGGCATCAAGGACTCGGAGCTGGGCGATGTGAAGTTCTTCTTGGAGAAGC
TGGTCAACACCGGCTTCCTCGACGCAAGCTTTCTAGACCAT

BO15377.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:01:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-RC 765 CG31221-PC 1..657 17..673 3285 100 Plus
CG31221-RB 660 CG31221-PB 1..657 17..673 3285 100 Plus
CG31221-RA 660 CG31221-PA 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:01:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-RC 4352 CG31221-RC 649..1305 17..673 3285 100 Plus
CG31221-RB 1633 CG31221-RB 644..1300 17..673 3285 100 Plus
CG31221-RA 4352 CG31221-RA 649..1305 17..673 3285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19454066..19454265 329..528 1000 100 Plus
3R 32079331 3R 19416205..19416388 17..200 920 100 Plus
3R 32079331 3R 19457118..19457264 527..673 735 100 Plus
3R 32079331 3R 19440702..19440831 200..329 650 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:01:05 has no hits.

BO15377.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:09 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
CG31221-RB 1..660 17..676 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:49:59 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
CG31221-RB 639..1295 17..675 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:04 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
CG31221-RA 649..1305 17..675 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:09 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
CG31221-RB 635..1295 11..673 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:44 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
CG31221-RA 649..1305 17..675 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:44 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19416205..19416388 17..200 100 -> Plus
3R 19440703..19440831 201..329 100 -> Plus
3R 19454067..19454265 330..528 100 -> Plus
3R 19457120..19457264 529..675 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:04 Download gff for BO15377.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15241927..15242110 17..200 100 -> Plus
arm_3R 15266425..15266553 201..329 100 -> Plus
arm_3R 15279789..15279987 330..528 100 -> Plus
arm_3R 15282842..15282986 529..675 98   Plus

BO15377.pep Sequence

Translation from 16 to 691

> BO15377.pep
MSFLAMDHHHHHHHQQPRQHHLSMWPSFAVCLLLLQTTTTTMAIDLSRLY
GHMANPIVKRSEACHPYEPFKCPGDGNCISIQYLCDGAPDCSDGYDEDMR
LCTAAKRPPVEETASFLQSLIASHGPNYLEKLFGSKARDALSPLGGVEKV
AIALSESQTIEDFGAALHLMRSDLEHLRSVFMAVENGDLGMLKSLGIKDS
ELGDVKFFLEKLVNTGFLDASFLDH

BO15377.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31221-PB 219 CG31221-PB 1..219 1..219 1168 100 Plus
CG31221-PA 219 CG31221-PA 1..219 1..219 1168 100 Plus
CG31221-PC 254 CG31221-PC 1..219 1..219 1168 100 Plus