Clone BO15381 Report

Search the DGRC for BO15381

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:81
Vector:pDNR-Dual
Associated Gene/Transcriptl(2)35Di-RA
Protein status:BO15381.pep: validated full length
Sequenced Size:535

Clone Sequence Records

BO15381.3prime Sequence

533 bp (532 high quality bases) assembled on 2006-06-16

> BO15381.3prime
ATGGTCTAGAAAGCTTGCAGCTTTCAGCGGCGACTCGTTGAATCCGCGAG
CCGCGTAATCGGAAGGCGCCGATCGATCGGAGACCTTGGGATAGCCCTCA
TCTCCGGGCACGCACTGCTTGCGCGAGTGGATCACACGCCAGCCGCCCTT
CCGGGTCCAGTCATTCTGATTGTACTTGAAGTAGTAGGCGCCGGCGTAGA
TTCCGGTTAGGGCGAGCAGAGCCTTTCCGGTCCAGAAGCGCACGGTGTAC
GCGCGCTGAAAGCCCAGGACGGGTTCCAAAACATTGCAGACCTTGTCGAG
GGGAGCGCGGTAGAAGCGCTTGATGGGGTTGTTCAGCTCCAGCTCCAGGG
CGGGCACCTTGCGGGGTCCATGGTGCAGCTCCTGGTCCTTCAGCCACTGT
TTGCGCCAGGCGCGCTCCTCCGGCGACATGCCGATCAGGCGCTCCCGCTC
CCGCACCATGCGGCCCGCAATTACCATCGGCTTCACGCCGCCCGTTTCCG
AGGCACCACCAGCTACCATGTCGACTGATAACT

BO15381.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13240-PA 504 l(2)35Di-RA 1..501 519..19 2430 99.4 Minus
CG13240-PB 417 l(2)35Di-RB 1..358 519..162 1740 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-RC 992 CG13240-RC 103..603 519..19 2460 99.4 Minus
l(2)35Di-RA 710 CG13240-RA 103..603 519..19 2460 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15750721..15750976 264..519 1265 99.6 Plus
2L 23513712 2L 15749708..15749851 19..162 705 99.3 Plus
2L 23513712 2L 15750549..15750652 162..265 505 99 Plus
Blast to na_te.dros performed on 2015-02-10 16:32:01 has no hits.

BO15381.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:33 Download gff for BO15381.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13240-PA 1..504 16..519 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:11 Download gff for BO15381.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13240-PA 1..504 16..519 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:59:58 Download gff for BO15381.3prime
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 103..608 14..519 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:50:19 Download gff for BO15381.3prime
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 103..608 14..519 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:50:19 Download gff for BO15381.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15749709..15749851 20..162 99 <- Plus
2L 15750550..15750651 163..264 99 <- Plus
2L 15750722..15750976 265..519 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:59:58 Download gff for BO15381.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15749709..15749851 20..162 99 <- Plus
arm_2L 15750550..15750651 163..264 99 <- Plus
arm_2L 15750722..15750976 265..519 99   Plus

BO15381.5prime Sequence

533 bp (532 high quality bases) assembled on 2006-05-29

> BO15381.5prime
GAAGTTATCAGTCGACATGGTAGCTGGTGGTGCCTCGGAAACGGGCGGCG
TGAAGCCGATGGTAATTGCGGGCCGCATGGTGCGGGAGCGGGAGCGCCTG
ATCGGCATGTCGCCGGAGGAGCGCGCCTGGCGCAAACAGTGGCTGAAGGA
CCAGGAGCTGCACCATGGACCCCGCAAGGTGCCCGCCCTGGAGCTGGAGC
TGAACAACCCCATCAAGCGCTTCTACCGCGCTCCCCTCGACAAGGTCTGC
AATGTTTTGGAACCCGTCCTGGGCTTTCAGCGCGCGTACACCGTGCGCTT
CTGGACCGGAAAGGCTCTGCTCGCCCTAACCGGAATCTACGCCGGCGCCT
ACTACTTCAAGTACAATCAGAATGACTGGACCCGGAAGGGCGGCTGGCGT
GTGATCCACTCGCGCAAGCAGTGCGTGCCCGGAGATGAGGGCTATCCCAA
GGTCTCCGATCGATCGGCGCCTTCCGATTACGCGGCTCGCGGATTCAACG
AGTCGCCGCTGAAAGCTGCAAGCTTTCTAGACC

BO15381.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13240-PA 504 l(2)35Di-RA 1..501 17..517 2430 99.4 Plus
CG13240-PB 417 l(2)35Di-RB 1..358 17..374 1740 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-RC 992 CG13240-RC 103..603 17..517 2460 99.4 Plus
l(2)35Di-RA 710 CG13240-RA 103..603 17..517 2460 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15750721..15750976 272..17 1265 99.6 Minus
2L 23513712 2L 15749708..15749851 517..374 705 99.3 Minus
2L 23513712 2L 15750549..15750652 374..271 505 99 Minus
Blast to na_te.dros performed on 2015-02-10 20:27:47 has no hits.

BO15381.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:34 Download gff for BO15381.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13240-PA 1..504 17..520 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:12 Download gff for BO15381.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13240-PA 1..504 17..520 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:33:33 Download gff for BO15381.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 103..608 17..522 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:36:12 Download gff for BO15381.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 103..608 17..522 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:36:12 Download gff for BO15381.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15749709..15749851 374..516 99 <- Minus
2L 15750550..15750651 272..373 99 <- Minus
2L 15750722..15750976 17..271 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:33:33 Download gff for BO15381.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15749709..15749851 374..516 99 <- Minus
arm_2L 15750550..15750651 272..373 99 <- Minus
arm_2L 15750722..15750976 17..271 99   Minus

BO15381.complete Sequence

535 bp (535 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633439

> BO15381.complete
GAAGTTATCAGTCGACATGGTAGCTGGTGGTGCCTCGGAAACGGGCGGCG
TGAAGCCGATGGTAATTGCGGGCCGCATGGTGCGGGAGCGGGAGCGCCTG
ATCGGCATGTCGCCGGAGGAGCGCGCCTGGCGCAAACAGTGGCTGAAGGA
CCAGGAGCTGCACCATGGACCCCGCAAGGTGCCCGCCCTGGAGCTGGAGC
TGAACAACCCCATCAAGCGCTTCTACCGCGCTCCCCTCGACAAGGTCTGC
AATGTTTTGGAACCCGTCCTGGGCTTTCAGCGCGCGTACACCGTGCGCTT
CTGGACCGGAAAGGCTCTGCTCGCCCTAACCGGAATCTACGCCGGCGCCT
ACTACTTCAAGTACAATCAGAATGACTGGACCCGGAAGGGCGGCTGGCGT
GTGATCCACTCGCGCAAGCAGTGCGTGCCCGGAGATGAGGGCTATCCCAA
GGTCTCCGATCGATCGGCGCCTTCCGATTACGCGGCTCGCGGATTCAACG
AGTCGCCGCTGAAAGCTGCAAGCTTTCTAGACCAT

BO15381.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:43:55
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-RC 504 CG13240-PC 1..501 17..517 2460 99.4 Plus
l(2)35Di-RA 504 CG13240-PA 1..501 17..517 2460 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-RC 992 CG13240-RC 103..603 17..517 2460 99.4 Plus
l(2)35Di-RA 710 CG13240-RA 103..603 17..517 2460 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15750721..15750976 272..17 1265 99.6 Minus
2L 23513712 2L 15749708..15749851 517..374 705 99.3 Minus
2L 23513712 2L 15750549..15750652 374..271 505 99 Minus
Blast to na_te.dros performed on 2014-11-27 15:43:54 has no hits.

BO15381.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:11 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 1..504 17..520 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:02 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 79..584 17..522 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:22 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 103..603 17..519 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:11 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 79..584 17..522 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:15:09 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RA 103..603 17..519 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:15:09 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15749705..15749851 374..519 97 <- Minus
2L 15750550..15750651 272..373 99 <- Minus
2L 15750722..15750976 17..271 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:22 Download gff for BO15381.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15749705..15749851 374..519 97 <- Minus
arm_2L 15750550..15750651 272..373 99 <- Minus
arm_2L 15750722..15750976 17..271 99   Minus

BO15381.pep Sequence

Translation from 16 to 535

> BO15381.pep
MVAGGASETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELHH
GPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKA
LLALTGIYAGAYYFKYNQNDWTRKGGWRVIHSRKQCVPGDEGYPKVSDRS
APSDYAARGFNESPLKAASFLDH

BO15381.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-PC 167 CG13240-PC 1..167 1..167 901 100 Plus
l(2)35Di-PA 167 CG13240-PA 1..167 1..167 901 100 Plus