Clone BO15382 Report

Search the DGRC for BO15382

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptmRpS10-RB
Protein status:BO15382.pep: validated full length
Sequenced Size:553

Clone Sequence Records

BO15382.3prime Sequence

551 bp (550 high quality bases) assembled on 2006-06-16

> BO15382.3prime
ATGGTCTAGAAAGCTTGCAACTTGCTCCGGCGGCTGGCGCAAGTGCTCTG
GGATCTCCTGCAGCTCAGTCCTGGAAGCCTGCAGCGCTACGCCCTCGGGC
AGATTACGTTCAATATACTCTAGAAATGTATCTAGCGTGGAGCCCGTCAA
CTTGTGGAAGTTCATATAGCGGAAGTGGGTTCGCACCTCGTACTGTACGC
GATGTTTCTTGTAGATATGCACCGACTTCAGGAGCGTCATCCGCTCGTGG
TGCGCCTTGCGAGGTGACCAACATTTTCCCTTTTCAATGCCCAAATGCTC
GGCAGCAGTAGTAGCAAACCAGGTGTAGCTCTTCAGAACTGCCGGATCAA
TACCCCGCAGCTCAATCTCCAGCTTGCTGTAGAGTTTATCCGGTTCCGGA
GCAGGTGCCGCAGGTGAAAGATTGCCTTGTACGCCGGAACTGGTGTTTAC
CGTGGACAGAGCCCGCATTGGCTGTGTCCAGCGGAGCGTCTTTATAGCCT
GGGAATATAAATCTAGATGTTTCATATGCATTTTCATGTCGACTGATAAC
T

BO15382.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4247-PB 522 mRpS10-RB 1..519 537..19 2595 100 Minus
CG4247-PA 492 mRpS10-RA 7..489 501..19 2415 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS10-RB 746 CG4247-RB 61..579 537..19 2595 100 Minus
mRpS10-RA 723 CG4247-RA 74..556 501..19 2415 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15229762..15230027 537..272 1330 100 Minus
3R 32079331 3R 15230096..15230349 272..19 1270 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:42:15 has no hits.

BO15382.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:35 Download gff for BO15382.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4247-PB 1..522 18..537 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:14 Download gff for BO15382.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4247-PB 1..522 18..537 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:06:15 Download gff for BO15382.3prime
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 54..583 13..548 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:48:52 Download gff for BO15382.3prime
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 54..583 13..548 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:48:52 Download gff for BO15382.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15230097..15230353 13..271 98   Minus
3R 15229755..15230027 272..548 98 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:06:15 Download gff for BO15382.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11055819..11056075 13..271 98   Minus
arm_3R 11055477..11055749 272..548 98 -> Minus

BO15382.5prime Sequence

551 bp (550 high quality bases) assembled on 2006-06-16

> BO15382.5prime
GAAGTTATCAGTCGACATGAAAATGCATATGAAACATCTAGATTTATATT
CCCAGGCTATAAAGACGCTCCGCTGGACACAGCCAATGCGGGCTCTGTCC
ACGGTAAACACCAGTTCCGGCGTACAAGGCAATCTTTCACCTGCGGCACC
TGCTCCGGAACCGGATAAACTCTACAGCAAGCTGGAGATTGAGCTGCGGG
GTATTGATCCGGCAGTTCTGAAGAGCTACACCTGGTTTGCTACTACTGCT
GCCGAGCATTTGGGCATTGAAAAGGGAAAATGTTGGTCACCTCGCAAGGC
GCACCACGAGCGGATGACGCTCCTGAAGTCGGTGCATATCTACAAGAAAC
ATCGCGTACAGTACGAGGTGCGAACCCACTTCCGCTATATGAACTTCCAC
AAGTTGACGGGCTCCACGCTAGATACATTTCTAGAGTATATTGAACGTAA
TCTGCCCGAGGGCGTAGCGCTGCAGGCTTCCAGGACTGAGCTGCAGGAGA
TCCCAGAGCACTTGCGCCAGCCGCCGGAGCAAGTTGCAAGCTTTCTAGAC
C

BO15382.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4247-PB 522 mRpS10-RB 1..519 17..535 2595 100 Plus
CG4247-PA 492 mRpS10-RA 7..489 53..535 2415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS10-RB 746 CG4247-RB 61..579 17..535 2595 100 Plus
mRpS10-RA 723 CG4247-RA 74..556 53..535 2415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:11:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15229762..15230027 17..282 1330 100 Plus
3R 32079331 3R 15230096..15230349 282..535 1270 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:11:33 has no hits.

BO15382.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:36 Download gff for BO15382.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4247-PB 1..522 17..536 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:15 Download gff for BO15382.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4247-PB 1..522 17..536 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:54:48 Download gff for BO15382.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 54..583 6..541 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:29:29 Download gff for BO15382.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 54..583 6..541 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:29:29 Download gff for BO15382.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15229755..15230027 6..282 98 -> Plus
3R 15230097..15230353 283..541 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:48 Download gff for BO15382.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11055477..11055749 6..282 98 -> Plus
arm_3R 11055819..11056075 283..541 98   Plus

BO15382.complete Sequence

553 bp (553 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633440

> BO15382.complete
GAAGTTATCAGTCGACATGAAAATGCATATGAAACATCTAGATTTATATT
CCCAGGCTATAAAGACGCTCCGCTGGACACAGCCAATGCGGGCTCTGTCC
ACGGTAAACACCAGTTCCGGCGTACAAGGCAATCTTTCACCTGCGGCACC
TGCTCCGGAACCGGATAAACTCTACAGCAAGCTGGAGATTGAGCTGCGGG
GTATTGATCCGGCAGTTCTGAAGAGCTACACCTGGTTTGCTACTACTGCT
GCCGAGCATTTGGGCATTGAAAAGGGAAAATGTTGGTCACCTCGCAAGGC
GCACCACGAGCGGATGACGCTCCTGAAGTCGGTGCATATCTACAAGAAAC
ATCGCGTACAGTACGAGGTGCGAACCCACTTCCGCTATATGAACTTCCAC
AAGTTGACGGGCTCCACGCTAGATACATTTCTAGAGTATATTGAACGTAA
TCTGCCCGAGGGCGTAGCGCTGCAGGCTTCCAGGACTGAGCTGCAGGAGA
TCCCAGAGCACTTGCGCCAGCCGCCGGAGCAAGTTGCAAGCTTTCTAGAC
CAT

BO15382.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS10-RB 522 CG4247-PB 1..519 17..535 2595 100 Plus
mRpS10-RA 492 CG4247-PA 7..489 53..535 2415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS10-RB 746 CG4247-RB 61..579 17..535 2595 100 Plus
mRpS10-RA 723 CG4247-RA 74..556 53..535 2415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15229762..15230027 17..282 1330 100 Plus
3R 32079331 3R 15230096..15230349 282..535 1270 100 Plus
Blast to na_te.dros performed on 2014-11-27 11:08:15 has no hits.

BO15382.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:12 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 1..522 17..536 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:05 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 1..532 9..541 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:23:46 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 61..579 17..537 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:12 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 1..532 9..541 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:35 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS10-RB 61..579 17..537 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:35 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15230097..15230349 283..537 99   Plus
3R 15229762..15230027 17..282 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:23:46 Download gff for BO15382.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11055484..11055749 17..282 100 -> Plus
arm_3R 11055819..11056071 283..537 99   Plus

BO15382.pep Sequence

Translation from 16 to 553

> BO15382.pep
MKMHMKHLDLYSQAIKTLRWTQPMRALSTVNTSSGVQGNLSPAAPAPEPD
KLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERM
TLLKSVHIYKKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGV
ALQASRTELQEIPEHLRQPPEQVASFLDH

BO15382.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS10-PB 173 CG4247-PB 1..173 1..173 915 100 Plus
mRpS10-PA 163 CG4247-PA 3..163 13..173 849 100 Plus