Clone BO15386 Report

Search the DGRC for BO15386

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG33156-RA
Protein status:BO15386.pep: validated full length
Sequenced Size:1396

Clone Sequence Records

BO15386.3prime Sequence

796 bp (748 high quality bases) assembled on 2006-06-16

> BO15386.3prime
ATGGTCTAGAAAGCTTGCCACACCTTACAATTTCATGTTCTCGATCTCGT
CCAGCGTATCCTCCGATCCGGATGCCGTCAGATCCGACAGCTCGTCCAGG
CACTTCTGTCGCTTGCGCACATTCCAGTGCAGTCCGTCGGCTAGGGAGGC
GAACCAGTCGGATATCTGATCCTGGGCGCAGATGCATGGCACGGGATAAA
TGGAGGTGGTCACGCGAAGGCTGTCGCCATGGAAGAGCTCCTGCCTGTTG
CGTCCATCGAAGCTAACCCACGATGTGTTGCGGCTCTCGGGGGATACTGA
TATCTTCAGCTCCACTCCTGCTGGCACCACAATGGGTCGGAAGCTAAGCG
AATGCGGGCAGATGGGAGTCACCATAATCGCCGGCACGGAGGGATGGATC
ATGGACGCACCGGCCGCCGCCGCATATGCCGTGCTTCCCGTGGGCGTCGA
TACGATCAGACCGTCGCCCTGCACCGACGTGATATACTTTCCGTCCAGAA
ACAGATCAATATTGCTCAGATACGGCGATGGACCACGATCAATGACCACT
TCGTTGAGCACCAGTATGCTGTTGGCTGCAGGTCGCGCCTCACCATCTAG
ATCTGCCTCCAGAGTCTTAGCCTCGTGTTTCCTATCGCTCCTGCGATGCA
TAACACAGCGCAAACGACTGCGAAGCGTTAGGGCAGCGTGACCCTCCAGG
ACGCTGGTCAGCTGCTCCTCAAAGTTATCGAAACGGAAGGGTGTGAGAAA
GCCGAGGGAGCCCCAATGGAAGGCCCTGACGGGGGGCACAGATTGC

BO15386.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-PC 1128 CG33156-RC 348..1118 796..26 3805 99.7 Minus
CG33156-PA 1365 CG33156-RA 585..1355 796..26 3805 99.7 Minus
CG33156-PE 1473 CG33156-RE 693..1463 796..26 3805 99.7 Minus
CG33156-PB 1362 CG33156-RB 582..1352 796..26 3805 99.7 Minus
CG6145-PA 1563 CG6145-RA 1099..1281 480..298 465 90.1 Minus
CG6145-PC 1647 CG6145-RC 1183..1365 480..298 465 90.1 Minus
CG6145-PB 1263 CG6145-RB 799..981 480..298 465 90.1 Minus
CG6145-PA 1563 CG6145-RA 1431..1496 148..83 155 89.3 Minus
CG6145-PC 1647 CG6145-RC 1515..1580 148..83 155 89.3 Minus
CG6145-PB 1263 CG6145-RB 1131..1196 148..83 155 89.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:42:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RF 1795 CG33156-RF 652..1429 796..19 3830 99.5 Minus
CG33156-RB 1824 CG33156-RB 681..1458 796..19 3830 99.5 Minus
CG33156-RE 2330 CG33156-RE 1187..1964 796..19 3830 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13548954..13549446 304..796 2435 99.6 Plus
2R 25286936 2R 13548610..13548896 19..305 1405 99.3 Plus
2R 25286936 2R 13538198..13538468 304..574 770 85.6 Plus
2R 25286936 2R 13537799..13538051 53..305 545 81 Plus
2R 25286936 2R 13538625..13538765 656..796 300 80.9 Plus
Blast to na_te.dros performed on 2015-02-12 11:42:33 has no hits.

BO15386.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:39 Download gff for BO15386.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PE 693..1473 18..796 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:19 Download gff for BO15386.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PE 693..1473 18..796 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:06:20 Download gff for BO15386.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RE 1187..1964 19..796 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:49:55 Download gff for BO15386.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RE 1187..1964 19..796 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:49:55 Download gff for BO15386.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 13548610..13548894 19..303 99 <- Plus
2R 13548954..13549446 304..796 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:06:20 Download gff for BO15386.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9436115..9436399 19..303 99 <- Plus
arm_2R 9436459..9436951 304..796 99   Plus

BO15386.5prime Sequence

829 bp (751 high quality bases) assembled on 2006-06-16

> BO15386.5prime
GAAGTTATCAGTCGACATGCCAGCACCAGAGGACCTAAACTCCTCCGACC
AAGAGGAATATTTCTGCACCGAAAAGGACGCCGCTGCCGATGGAAGTCAT
CTGTTGCATGCCCCTGGAACGGTGGATGGAGCAACTGCATCCACCTCGGC
TCCGGGACTGGGCGGCAACCACATGACCAGCAGCTGGTGGTGGCGCACTC
GCAGCTTGAATGCACCCTCGCCTGTCCAGCAGTTCGGACCATGTGGTCGC
ATCATGAAAAACTCCGCCATGGTGATGCAGATCCAGGATCCGGCTAGTCA
ACGTCTCACCTGGTACAAGCCACCACTCACCGTGCTCGTGATCAAGAAGG
TCAGCGATGCCTCGGTGCTGGCACCGTTCGTCTACCTGGTGGACTGGCTG
CTGCAGGAGAAGAACATGGTCGTTTGGGTGGAGTCGGCCGTGCTGGAGGA
TGTCCAGCTCAACGAAAATGTGCGATTCAAGGCCATTCGGGATAAGCTAG
TGACTTTCAAAGATGGCCGAGATGATCTGACCGATCGCATAGACTTTATA
GTTTGCCTGGGTGGCGATGGCACCCTGCTGTATGCTTCGCTGCTCTTCCA
GCAATCTGTGCCCCCCGTCATGGCCTTCCATTTGGGCTCCCTCGGCTTTC
TCACACCCTTCCGTTTCGATAACTTTGAGGAGCAGCTGACCAGCGTCCTG
GAGGGTCACGCTGCCCTAACGCTTCGCAGTCGTTTGCGCTGTGTTATGCA
TCGCAGGAGCGATAGGAAACACGAGGCTAAGACTCTGGAGGCAGATCTAA
ATGGTGAGGCGCGACCTGCAGCCAACAGC

BO15386.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-PA 1365 CG33156-RA 1..813 17..829 4040 99.8 Plus
CG33156-PB 1362 CG33156-RB 173..810 192..829 3165 99.8 Plus
CG33156-PE 1473 CG33156-RE 285..921 193..829 3160 99.8 Plus
CG33156-PC 1128 CG33156-RC 1..576 254..829 2855 99.8 Plus
CG6145-PA 1563 CG6145-RA 272..392 225..345 330 90.9 Plus
CG6145-PC 1647 CG6145-RC 356..476 225..345 330 90.9 Plus
CG6145-PB 1263 CG6145-RB 1..92 254..345 260 91.3 Plus
CG6145-PA 1563 CG6145-RA 601..689 494..582 195 88.7 Plus
CG6145-PC 1647 CG6145-RC 685..773 494..582 195 88.7 Plus
CG6145-PB 1263 CG6145-RB 301..389 494..582 195 88.7 Plus
CG6145-PA 1563 CG6145-RA 430..485 386..441 155 91 Plus
CG6145-PC 1647 CG6145-RC 514..569 386..441 155 91 Plus
CG6145-PB 1263 CG6145-RB 130..185 386..441 155 91 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RA 1874 CG33156-RA 147..959 17..829 4050 99.9 Plus
CG33156-RF 1795 CG33156-RF 243..880 192..829 3175 99.8 Plus
CG33156-RB 1824 CG33156-RB 272..909 192..829 3175 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13549599..13549917 510..192 1595 100 Minus
2R 25286936 2R 13549218..13549536 829..511 1580 99.7 Minus
2R 25286936 2R 13552107..13552283 193..17 885 100 Minus
2R 25286936 2R 13538625..13538855 741..511 585 83.5 Minus
2R 25286936 2R 13539104..13539350 441..192 585 83.2 Minus
Blast to na_te.dros performed on 2015-02-09 22:39:57 has no hits.

BO15386.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:40 Download gff for BO15386.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PA 1..813 17..829 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:20 Download gff for BO15386.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-PA 1..813 17..829 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:22:24 Download gff for BO15386.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 137..959 6..829 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:47:19 Download gff for BO15386.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 137..959 6..829 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:47:19 Download gff for BO15386.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13549218..13549536 511..829 99 <- Minus
2R 13549599..13549916 193..510 100 <- Minus
2R 13552108..13552293 6..192 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:22:24 Download gff for BO15386.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9439613..9439798 6..192 97   Minus
arm_2R 9436723..9437041 511..829 99 <- Minus
arm_2R 9437104..9437421 193..510 100 <- Minus

BO15386.complete Sequence

1396 bp (1396 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633441

> BO15386.complete
GAAGTTATCAGTCGACATGCCAGCACCAGAGGACCTAAACTCCTCCGACC
AAGAGGAATATTTCTGCACCGAAAAGGACGCCGCTGCCGATGGAAGTCAT
CTGTTGCATGCCCCTGGAACGGTGGATGGAGCAACTGCATCCACCTCGGC
TCCGGGACTGGGCGGCAACCACATGACCAGCAGCTGGTGGTGGCGCACTC
GCAGCTTGAATGCACCCTCGCCTGTCCAGCAGTTCGGACCATGTGGTCGC
ATCATGAAAAACTCCGCCATGGTGATGCAGATCCAGGATCCGGCTAGTCA
ACGTCTCACCTGGTACAAGCCACCACTCACCGTGCTCGTGATCAAGAAGG
TCAGCGATGCCTCGGTGCTGGCACCGTTCGTCTACCTGGTGGACTGGCTG
CTGCAGGAGAAGAACATGGTCGTTTGGGTGGAGTCGGCCGTGCTGGAGGA
TGTCCAGCTCAACGAAAATGTGCGATTCAAGGCCATTCGGGATAAGCTAG
TGACTTTCAAAGATGGCCGAGATGATCTGACCGATCGCATAGACTTTATA
GTTTGCCTGGGTGGCGATGGCACCCTGCTGTATGCTTCGCTGCTCTTCCA
GCAATCTGTGCCCCCCGTCATGGCCTTCCATTTGGGCTCCCTCGGCTTTC
TCACACCCTTCCGTTTCGATAACTTTGAGGAGCAGCTGACCAGCGTCCTG
GAGGGTCACGCTGCCCTAACGCTTCGCAGTCGTTTGCGCTGTGTTATGCA
TCGCAGGAGCGATAGGAAACACGAGGCTAAGACTCTGGAGGCAGATCTAG
ATGGTGAGGCGCGACCTGCAGCCAACAGCATACTGGTGCTCAACGAAGTG
GTCATTGATCGTGGTCCATCGCCGTATCTGAGCAATATTGATCTGTTTCT
GGACGGAAAGTATATCACGTCGGTGCAGGGCGACGGTCTGATCGTATCGA
CGCCCACGGGAAGCACGGCATATGCGGCGGCGGCCGGTGCGTCCATGATC
CATCCCTCCGTGCCGGCGATTATGGTGACTCCCATCTGCCCGCATTCGCT
TAGCTTCCGACCCATTGTGGTGCCAGCAGGAGTGGAGCTGAAGATATCAG
TATCCCCCGAGAGCCGCAACACATCGTGGGTTAGCTTCGATGGACGCAAC
AGGCAGGAGCTCTTCCATGGCGACAGCCTTCGCGTGACCACCTCCATTTA
TCCCGTGCCATGCATCTGCGCCCAGGATCAGATATCCGACTGGTTCGCCT
CCCTAGCCGACGGACTGCACTGGAATGTGCGCAAGCGACAGAAGTGCCTG
GACGAGCTGTCGGATCTGACGGCATCCGGATCGGAGGATACGCTGGACGA
GATCGAGAACATGAAATTGTACGATGTGGCAAGCTTTCTAGACCAT

BO15386.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RA 1365 CG33156-PA 1..1362 17..1378 6810 100 Plus
CG33156-RF 1353 CG33156-PF 164..1350 192..1378 5935 100 Plus
CG33156-RB 1362 CG33156-PB 173..1359 192..1378 5935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-RA 1874 CG33156-RA 147..1508 17..1378 6810 100 Plus
CG33156-RF 1795 CG33156-RF 243..1429 192..1378 5935 100 Plus
CG33156-RB 1824 CG33156-RB 272..1458 192..1378 5935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13548954..13549536 1093..511 2915 100 Minus
2R 25286936 2R 13549599..13549917 510..192 1595 100 Minus
2R 25286936 2R 13548610..13548896 1378..1092 1435 100 Minus
2R 25286936 2R 13552107..13552283 193..17 885 100 Minus
2R 25286936 2R 13538198..13538468 1093..823 770 85.6 Minus
2R 25286936 2R 13538625..13538855 741..511 585 83.5 Minus
2R 25286936 2R 13539104..13539350 441..192 585 83.2 Minus
2R 25286936 2R 13537799..13538051 1344..1092 545 81 Minus
Blast to na_te.dros performed on 2014-11-27 14:05:18 has no hits.

BO15386.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:15 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 1..1365 17..1379 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:11 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 114..1485 6..1378 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:33:16 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 147..1508 17..1380 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:15 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 114..1485 6..1378 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:59 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
CG33156-RA 147..1508 17..1380 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:59 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13552108..13552283 17..192 100   Minus
2R 13549599..13549916 193..510 100 <- Minus
2R 13548608..13548894 1094..1380 99 <- Minus
2R 13548954..13549536 511..1093 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:33:16 Download gff for BO15386.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9436113..9436399 1094..1380 99 <- Minus
arm_2R 9436459..9437041 511..1093 100 <- Minus
arm_2R 9437104..9437421 193..510 100 <- Minus
arm_2R 9439613..9439788 17..192 100   Minus

BO15386.pep Sequence

Translation from 16 to 1396

> BO15386.pep
MPAPEDLNSSDQEEYFCTEKDAAADGSHLLHAPGTVDGATASTSAPGLGG
NHMTSSWWWRTRSLNAPSPVQQFGPCGRIMKNSAMVMQIQDPASQRLTWY
KPPLTVLVIKKVSDASVLAPFVYLVDWLLQEKNMVVWVESAVLEDVQLNE
NVRFKAIRDKLVTFKDGRDDLTDRIDFIVCLGGDGTLLYASLLFQQSVPP
VMAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAALTLRSRLRCVMHRRSDR
KHEAKTLEADLDGEARPAANSILVLNEVVIDRGPSPYLSNIDLFLDGKYI
TSVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPI
VVPAGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTSIYPVPCI
CAQDQISDWFASLADGLHWNVRKRQKCLDELSDLTASGSEDTLDEIENMK
LYDVASFLDH

BO15386.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG33156-PA 454 CG33156-PA 1..454 1..454 2371 100 Plus
CG33156-PE 490 CG33156-PE 73..490 37..454 2067 96.2 Plus
CG33156-PF 450 CG33156-PF 56..450 60..454 2041 100 Plus
CG33156-PB 453 CG33156-PB 59..453 60..454 2041 100 Plus
CG33156-PC 375 CG33156-PC 1..375 80..454 1933 100 Plus