Clone BO15403 Report

Search the DGRC for BO15403

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:3
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO15403.pep: validated full length
Sequenced Size:1513

Clone Sequence Records

BO15403.3prime Sequence

836 bp (793 high quality bases) assembled on 2006-05-29

> BO15403.3prime
ATGGTCTAGAAAGCTTGCCGATCTCTTTGGCTTCTTGCCAACTTTCTTGT
GGGCCAACTTCGATGGATTCCGTTTGCACAGATAGCATAGGACTAGGATC
AGTAAAATTAAAGGTAACAGGATCAGGGCTACACTATCCAGTGAATGGTA
GACAAATCCATTCAGTTCTATGCCTGGAGATTGAAGTAGTCTGGCGGCAA
TCAATCCATTGCTAATGACGTGTTCCACAGACCAAATGGCTGATTCCAGA
GGCGTCTGCTGACGCTCATTGAACACCTTGGAGACCTCAAGAGATCGTTG
GGCATAGCTGTTTTTGCTGAGCTCTGCAAGAGCTTTCTTTAGGTTTGGTA
CAGTGATGTCTTGGTAGTCCAACTTCAGACCCATTCCCCGATTTTGCACC
GAGAATGCATTAAGGAATTGATCTCCGTAGATTGGGGTGACTAGTAGGGG
TTTGCCACAATGCACCGATTCAGTGGTTCCAAGTAAGCCGCCATGGGACC
AAAACAACTTTACTTTTGGGTGACATAGAAGCGCCAATTGGGGAGCCCAT
TTGACGAAGAGAAACTTGGAGGCATCTGTATCGGGAGTCTCATCCGCCTC
CCATTTCCAGATGATCTTCAAGGGCTGGCTTTTTAGAACTTCTAGTATGG
CTGACAGTTTATCTTCGTCAATACTTGAAGCCCGCACCATTGAACCCCAG
CTTATGAAGATCACACCCTCTGCTGATTGGTTAAGGAAATTGGCGATATT
CTGGGGTAACTCCTGCTCCGCTTTCTTGGTGATATGTACTCCTCCGATTT
CCCACAATTGCAGTGATTGTGGACGACTTCCCATCA

BO15403.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG2788-PA 1482 Dot-RA 696..1479 802..19 3920 100 Minus
CG2788-PA 1482 Dot-RA 662..692 836..806 155 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dot-RB 2303 CG2788-RB 983..1800 836..19 4045 99.8 Minus
Dot-RA 1720 CG2788-RA 802..1619 836..19 4045 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3620079..3620392 836..523 1525 99 Minus
2L 23513712 2L 3620779..3621070 310..19 1460 100 Minus
2L 23513712 2L 3620509..3620725 524..308 1085 100 Minus
Blast to na_te.dros performed on 2015-02-08 12:47:58 has no hits.

BO15403.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:54 Download gff for BO15403.3prime
Subject Subject Range Query Range Percent Splice Strand
Dot-PA 663..1482 18..835 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:40 Download gff for BO15403.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2788-PA 663..1482 18..835 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:46:29 Download gff for BO15403.3prime
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 803..1619 19..835 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:50:23 Download gff for BO15403.3prime
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 803..1619 19..835 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:50:23 Download gff for BO15403.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 3620080..3620390 525..835 99 -> Minus
2L 3620509..3620725 308..524 100 -> Minus
2L 3620782..3621070 19..307 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:46:29 Download gff for BO15403.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3620080..3620390 525..835 99 -> Minus
arm_2L 3620509..3620725 308..524 100 -> Minus
arm_2L 3620782..3621070 19..307 100   Minus

BO15403.5prime Sequence

779 bp (778 high quality bases) assembled on 2006-05-29

> BO15403.5prime
GAAGTTATCAGTCGACATGCCCATCCTGAACGAGCTGGCGCATCGTGGTC
ATGACATCACGGTAATCTCGTACGTTAAGAACCCCCAAGCCGGAGCCTAT
CCCAACTATGAGGAGCTACTGATTTCGGCTCCCGGTGAGGATCAGTCGAG
CACCACGATCAACTTGGTTCCCCTGACGGAGCACACACCCACCAGATCCC
TGGGAGTCCTCATCCGTGAGTATGTAGATCTGCACGAAGAGGGCCAGAAG
ACCTGCGAGCACCTCTTCGCCAGTGGCCACATAGAACGGGCCATCGAACG
ACATCGAAATAAGCCCTACGATCTGCTACTCACGGAATACTTCAACTCCG
ATTGCCAACTGGCCTTGGCCAAGTTATTAAATCTGCCAATTATAGGCTTA
AGTACCTGCGCGCTGATGCCCTACTATTACGATCGCATCGATTTGCCCGA
CACACCTGCCTTCATACAGTCGGAATTCGTGGGTTTCGCTGGCCAACTGA
ACTGGCACGAACGGCTGCTCAACTTTGTTCAGGCCAAGTTATTAAAGTTT
CTGTACAAGTACCATTCCAACAGGGCTGACAACGAGTTGGTACGGAAGTA
TCTTGGAGTGGAAGTAGACGTAGAAGAAGTAGCTCGAACTCAAACTGCTT
TTATATTTGGAAACCAACATTACTCCCTGATGGGAAGTCGTCCACAATCA
CTGCAATTTGTGGAAATCGGAGGAGTACATATCACCAAGAAAGCGGAGCA
GGAGTTACCCCAGAATATCGCCAATTTCC

BO15403.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG2788-PA 1482 Dot-RA 1..763 17..779 3815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dot-RB 2303 CG2788-RB 322..1084 17..779 3815 100 Plus
Dot-RA 1720 CG2788-RA 141..903 17..779 3815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3619418..3620180 17..779 3815 100 Plus
Blast to na_te.dros performed on 2015-02-04 01:57:15 has no hits.

BO15403.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:55 Download gff for BO15403.5prime
Subject Subject Range Query Range Percent Splice Strand
Dot-PA 1..763 17..779 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:41 Download gff for BO15403.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2788-PA 1..763 17..779 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:41:18 Download gff for BO15403.5prime
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 135..903 11..779 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:18:31 Download gff for BO15403.5prime
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 135..903 11..779 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:18:31 Download gff for BO15403.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3619412..3620180 11..779 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:41:18 Download gff for BO15403.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3619412..3620180 11..779 99   Plus

BO15403.complete Sequence

1513 bp (1513 high quality bases) assembled on 2006-08-25

GenBank Submission: FJ633446

> BO15403.complete
GAAGTTATCAGTCGACATGCCCATCCTGAACGAGCTGGCGCATCGTGGTC
ATGACATCACGGTAATCTCGTACGTTAAGAACCCCCAAGCCGGAGCCTAT
CCCAACTATGAGGAGCTACTGATTTCGGCTCCCGGTGAGGATCAGTCGAG
CACCACGATCAACTTGGTTCCCCTGACGGAGCACACACCCACCAGATCCC
TGGGAGTCCTCATCCGTGAGTATGTAGATCTGCACGAAGAGGGCCAGAAG
ACCTGCGAGCACCTCTTCGCCAGTGGCCACATAGAACGGGCCATCGAACG
ACATCGAAATAAGCCCTACGATCTGCTACTCACGGAATACTTCAACTCCG
ATTGCCAACTGGCCTTGGCCAAGTTATTAAATCTGCCAATTATAGGCTTA
AGTACCTGCGCGCTGATGCCCTACTATTACGATCGCATCGATTTGCCCGA
CACACCTGCCTTCATACAGTCGGAATTCGTGGGTTTCGCTGGCCAACTGA
ACTGGCACGAACGGCTGCTCAACTTTGTTCAGGCCAAGTTATTAAAGTTT
CTGTACAAGTACCATTCCAACAGGGCTGACAACGAGTTGGTACGGAAGTA
TCTTGGAGTGGAAGTAGACGTAGAAGAAGTAGCTCGAACTCAAACTGCTT
TTATATTTGGAAACCAACATTACTCCCTGATGGGAAGTCGTCCACAATCA
CTGCAATTTGTGGAAATCGGAGGAGTACATATCACCAAGAAAGCGGAGCA
GGAGTTACCCCAGAATATCGCCAATTTCCTTAACCAATCAGCAGAGGGTG
TGATCTTCATAAGCTGGGGTTCAATGGTGCGGGCTTCAAGTATTGACGAA
GATAAACTGTCAGCCATACTAGAAGTTCTAAAAAGCCAGCCCTTGAAGAT
CATCTGGAAATGGGAGGCGGATGAGACTCCCGATACAGATGCCTCCAAGT
TTCTCTTCGTCAAATGGGCTCCCCAATTGGCGCTTCTATGTCACCCAAAA
GTAAAGTTGTTTTGGTCCCATGGCGGCTTACTTGGAACCACTGAATCGGT
GCATTGTGGCAAACCCCTACTAGTCACCCCAATCTACGGAGATCAATTCC
TTAATGCATTCTCGGTGCAAAATCGGGGAATGGGTCTGAAGTTGGACTAC
CAAGACATCACTGTACCAAACCTAAAGAAAGCTCTTGCAGAGCTCAGCAA
AAACAGCTATGCCCAACGATCTCTTGAGGTCTCCAAGGTGTTCAATGAGC
GTCAGCAGACGCCTCTGGAATCAGCCATTTGGTCTGTGGAACACGTCATT
AGCAATGGATTGATTGCCGCCAGACTACTTCAATCTCCAGGCATAGAACT
GAATGGATTTGTCTACCATTCACTGGATAGTGTAGCCCTGATCCTGTTAC
CTTTAATTTTACTGATCCTAGTCCTATGCTATCTGTGCAAACGGAATCCA
TCGAAGTTGGCCCACAAGAAAGTTGGCAAGAAGCCAAAGAGATCGGCAAG
CTTTCTAGACCAT

BO15403.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dot-RB 1614 CG2788-PB 133..1611 17..1495 7395 100 Plus
Dot-RA 1614 CG2788-PA 133..1611 17..1495 7395 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dot-RB 2303 CG2788-RB 322..1800 17..1495 7395 100 Plus
Dot-RA 1720 CG2788-RA 141..1619 17..1495 7395 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3619418..3620392 17..991 4875 100 Plus
2L 23513712 2L 3620779..3621070 1204..1495 1460 100 Plus
2L 23513712 2L 3620509..3620725 990..1206 1085 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:03:55 has no hits.

BO15403.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:51:25 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 127..1614 11..1496 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:00 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 222..1706 11..1495 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:41 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 141..1619 17..1497 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:51:26 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 222..1706 11..1495 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:13:54 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
Dot-RA 141..1619 17..1497 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:13:54 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3619418..3620390 17..989 100 -> Plus
2L 3620509..3620725 990..1206 100 -> Plus
2L 3620782..3621070 1207..1497 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:41 Download gff for BO15403.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3619418..3620390 17..989 100 -> Plus
arm_2L 3620509..3620725 990..1206 100 -> Plus
arm_2L 3620782..3621070 1207..1497 99   Plus

BO15403.pep Sequence

Translation from 16 to 1513

> BO15403.pep
MPILNELAHRGHDITVISYVKNPQAGAYPNYEELLISAPGEDQSSTTINL
VPLTEHTPTRSLGVLIREYVDLHEEGQKTCEHLFASGHIERAIERHRNKP
YDLLLTEYFNSDCQLALAKLLNLPIIGLSTCALMPYYYDRIDLPDTPAFI
QSEFVGFAGQLNWHERLLNFVQAKLLKFLYKYHSNRADNELVRKYLGVEV
DVEEVARTQTAFIFGNQHYSLMGSRPQSLQFVEIGGVHITKKAEQELPQN
IANFLNQSAEGVIFISWGSMVRASSIDEDKLSAILEVLKSQPLKIIWKWE
ADETPDTDASKFLFVKWAPQLALLCHPKVKLFWSHGGLLGTTESVHCGKP
LLVTPIYGDQFLNAFSVQNRGMGLKLDYQDITVPNLKKALAELSKNSYAQ
RSLEVSKVFNERQQTPLESAIWSVEHVISNGLIAARLLQSPGIELNGFVY
HSLDSVALILLPLILLILVLCYLCKRNPSKLAHKKVGKKPKRSASFLDH

BO15403.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dot-PB 537 CG2788-PB 45..537 1..493 2560 100 Plus
Dot-PA 537 CG2788-PA 45..537 1..493 2560 100 Plus
CG17323-PD 519 CG17323-PD 47..518 2..488 749 34.1 Plus
CG17323-PC 519 CG17323-PC 47..518 2..488 749 34.1 Plus
CG17323-PE 519 CG17323-PE 47..518 2..488 749 34.1 Plus