Clone BO15414 Report

Search the DGRC for BO15414

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG2211-RA
Protein status:BO15414.pep: validated full length
Sequenced Size:1024

Clone Sequence Records

BO15414.3prime Sequence

756 bp (619 high quality bases) assembled on 2006-05-29

> BO15414.3prime
ATGGTCTAGAAAGCTTGCTCCATACTCGGACTGAACGGTGAGCGAAAACT
GACCCTTGGGAATTGAATTGGCATGGTACCAGATGCGTGTGTCCACCAAC
ACAGCATCTCCGGGCTCCACATAGAAGGAGAAGGGCTGACACTGGTGGTC
ACATTCAGGAGCAGGTGCCAGAAACCAGGTCTTGTTGCCACTTAACTGAG
CTTGCCACAACAGGCGGGGAATGTAATCAAGATGCATCACAGCCCCTTGC
TCGTAGCCCATTAATATGAAGTCCGTGTGAGGCATTTCAGCATCGAAGGG
CAGGAAATGCGGGCGGGGATACAGCTTTCTGAGCTCCGCCAGGACGGCCG
GCTGGCAGACACTCCAGCCCACGAACCAGGGCACTCCTTGAGTAAGATTT
GAACGCTCCGCGGACATGGAAAACACATGCTTCAGCGACTTGAGATCAGA
GTTGAAGTGCAGAAACTGGCAATCTGAGTCCATTGCTCCCGGGACACTTT
CGTACAATTCTTTTATGAAGGCAAAGCTGAGGTTCTTTTGTGCTGGCCAG
TGAGCCACCGCCCTCTTCACAATGATGGGCATTGAGGAGTACGCGTGCGG
TGCAAACTCCTCCATGGTGAGATTGGCCAAGATCAGGGGAGCCCTCACCC
CTTTTACCAAACTCGCAGTCACTAATGGGCCTGGTGGCCTCCCATACCAA
GTAGTTTGTTGGGCAGAAAGCAACGCACTCCGAGCAGGATCGAAGATGGT
CTCATA

BO15414.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-PA 993 CG2211-RA 355..990 654..19 3180 100 Minus
CG2211-PA 993 CG2211-RA 304..357 706..653 245 98.1 Minus
CG2211-PA 993 CG2211-RA 272..305 739..706 170 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 05:50:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 1226 CG2211-RB 311..1045 756..19 3585 99.3 Minus
CG2211-RA 1941 CG2211-RA 1026..1760 756..19 3585 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 05:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1333689..1334210 232..756 2445 99 Plus
3L 28110227 3L 1333420..1333632 19..231 1065 100 Plus
Blast to na_te.dros performed on 2015-02-03 05:50:23 has no hits.

BO15414.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:11 Download gff for BO15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 257..993 16..755 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:00 Download gff for BO15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 257..993 16..755 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:18:52 Download gff for BO15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 1027..1760 19..755 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:34:30 Download gff for BO15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 1027..1760 19..755 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:34:30 Download gff for BO15414.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 1333420..1333632 19..231 100 <- Plus
3L 1333689..1334209 232..755 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:18:52 Download gff for BO15414.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1333420..1333632 19..231 100 <- Plus
arm_3L 1333689..1334209 232..755 99   Plus

BO15414.5prime Sequence

840 bp (773 high quality bases) assembled on 2006-05-29

> BO15414.5prime
GAAGTTATCAGTCGACATGTTTCTGTTCATCAGCCGTCCCACGCGGACGC
TGGGCAACCGAATGCAGGCGGTTCGGGAGCGCTTGGGTCCGGACTTAGCT
GATCAACTGGACGCTCTGCATCGTAATGTGATGCGGACTGGTCTGGTGTC
CACACAGGAGCTGGAGGAGGCATTCCGCAAAACGCGCGACATGGACCACA
ACCCGAACCGGTTGAATCTGCTCTGGCTGCTGGGCATCGTGTTCTTCATC
ATGGTGGCCACCCCGGTCTTTTATGAGACCATCTCGTTCCTGCTCGGAGT
GCGTTGCTTTCTGCCCAACAACTACTTGGTATGGGAGGCCACCAGGCCCA
TTAGTGACTGCGAGTTTTGTAAAGGGGTGAGGGCTCCCCTGATCTTGGCC
AATCTCACCATGGAGGAGTTTGCACCGCACGCGTACTCCTCAATGCCCAT
CATTGTGAAGAGGGCGGTGGCTCACTGGCCAGCACAAAAGAACCTCAGCT
TTGCCTTCATAAAAGAATTGTACGAAAGTGTCCCGGGAGCAATGGACTCA
GATTGCCAGTTTCTGCACTTCAACTCTGATCTCAAGTCGCTGAAGCATGT
GTTTTCCATGTCCGCGGAGCGTTCAAATCTTACTCAAGGAGTGCCCTGGT
TCGTGGGCTGGAGTGTCTGCCAGCCGGCCGTCCTGGCGGAGCTCAGAAAG
CTGTATCCCCGCCCGCATTTCCTGCCCTTCGATGCTGAAATGCCTCACAC
GGACTTCATATTAATGGGCTACGAGCAAGGGGCTGTGATGCATCTTGATT
ACATTCCCCGCCTGTTGTGGCAAGCTCATTTAAGTGGCAA

BO15414.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-PA 993 CG2211-RA 1..824 17..840 4095 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 1226 CG2211-RB 56..879 17..840 4105 99.9 Plus
CG2211-RA 1941 CG2211-RA 771..1594 17..840 4105 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1333689..1334457 793..25 3845 100 Minus
3L 28110227 3L 1333586..1333632 840..794 220 97.9 Minus
Blast to na_te.dros performed on 2015-02-12 05:15:56 has no hits.

BO15414.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:12 Download gff for BO15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 1..822 17..838 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:01 Download gff for BO15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 1..822 17..838 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:55:18 Download gff for BO15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 759..1592 6..838 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:22:28 Download gff for BO15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 759..1592 6..838 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:22:28 Download gff for BO15414.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1333588..1333632 794..838 97 <- Minus
3L 1333689..1334457 25..793 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:55:18 Download gff for BO15414.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1333588..1333632 794..838 97 <- Minus
arm_3L 1333689..1334457 25..793 100   Minus

BO15414.complete Sequence

1024 bp (1024 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633448

> BO15414.complete
GAAGTTATCAGTCGACATGTTTCTGTTCATCAGCCGTCCCACGCGGACGC
TGGGCAACCGAATGCAGGCGGTTCGGGAGCGCTTGGGTCCGGACTTAGCT
GATCAACTGGACGCTCTGCATCGTAATGTGATGCGGACTGGTCTGGTGTC
CACACAGGAGCTGGAGGAGGCATTCCGCAAAACGCGCGACATGGACCACA
ACCCGAACCGGTTGAATCTGCTCTGGCTGCTGGGCATCGTGTTCTTCATC
ATGGTGGCCACCCCGGTCTTTTATGAGACCATCTCGTTCCTGCTCGGAGT
GCGTTGCTTTCTGCCCAACAACTACTTGGTATGGGAGGCCACCAGGCCCA
TTAGTGACTGCGAGTTTTGTAAAGGGGTGAGGGCTCCCCTGATCTTGGCC
AATCTCACCATGGAGGAGTTTGCACCGCACGCGTACTCCTCAATGCCCAT
CATTGTGAAGAGGGCGGTGGCTCACTGGCCAGCACAAAAGAACCTCAGCT
TTGCCTTCATAAAAGAATTGTACGAAAGTGTCCCGGGAGCAATGGACTCA
GATTGCCAGTTTCTGCACTTCAACTCTGATCTCAAGTCGCTGAAGCATGT
GTTTTCCATGTCCGCGGAGCGTTCAAATCTTACTCAAGGAGTGCCCTGGT
TCGTGGGCTGGAGTGTCTGCCAGCCGGCCGTCCTGGCGGAGCTCAGAAAG
CTGTATCCCCGCCCGCATTTCCTGCCCTTCGATGCTGAAATGCCTCACAC
GGACTTCATATTAATGGGCTACGAGCAAGGGGCTGTGATGCATCTTGATT
ACATTCCCCGCCTGTTGTGGCAAGCTCAGTTAAGTGGCAACAAGACCTGG
TTTCTGGCACCTGCTCCTGAATGTGACCACCAGTGTCAGCCCTTCTCCTT
CTATGTGGAGCCCGGAGATGCTGTGTTGGTGGACACACGCATCTGGTACC
ATGCCAATTCAATTCCCAAGGGTCAGTTTTCGCTCACCGTTCAGTCCGAG
TATGGAGCAAGCTTTCTAGACCAT

BO15414.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 993 CG2211-PB 1..990 17..1006 4950 100 Plus
CG2211-RA 993 CG2211-PA 1..990 17..1006 4950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 1226 CG2211-RB 56..1045 17..1006 4950 100 Plus
CG2211-RA 1941 CG2211-RA 771..1760 17..1006 4950 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1333689..1334457 793..25 3845 100 Minus
3L 28110227 3L 1333420..1333632 1006..794 1065 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:08:04 has no hits.

BO15414.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:42 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 1..993 17..1009 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:56 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 703..1704 6..1006 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:55 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 777..1760 23..1008 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:43 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 703..1704 6..1006 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:14 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 777..1760 23..1008 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:14 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1333417..1333632 794..1008 99 <- Minus
3L 1333689..1334459 23..793 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:55 Download gff for BO15414.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1333417..1333632 794..1008 99 <- Minus
arm_3L 1333689..1334459 23..793 99   Minus

BO15414.pep Sequence

Translation from 16 to 1024

> BO15414.pep
MFLFISRPTRTLGNRMQAVRERLGPDLADQLDALHRNVMRTGLVSTQELE
EAFRKTRDMDHNPNRLNLLWLLGIVFFIMVATPVFYETISFLLGVRCFLP
NNYLVWEATRPISDCEFCKGVRAPLILANLTMEEFAPHAYSSMPIIVKRA
VAHWPAQKNLSFAFIKELYESVPGAMDSDCQFLHFNSDLKSLKHVFSMSA
ERSNLTQGVPWFVGWSVCQPAVLAELRKLYPRPHFLPFDAEMPHTDFILM
GYEQGAVMHLDYIPRLLWQAQLSGNKTWFLAPAPECDHQCQPFSFYVEPG
DAVLVDTRIWYHANSIPKGQFSLTVQSEYGASFLDH

BO15414.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-PB 330 CG2211-PB 1..330 1..330 1773 100 Plus
CG2211-PA 330 CG2211-PA 1..330 1..330 1773 100 Plus
CG14331-PC 312 CG14331-PC 54..311 71..329 397 34 Plus