Clone Sequence Records
BO15418.3prime Sequence
826 bp (694 high quality bases) assembled on 2006-05-29
> BO15418.3prime
ATGGTCTAGAAAGCTTGCGAAGCACTTGCGGTGAACAATGGAGGGGCCCG
ACTCGTCGTACTCTTGCTTCGAGATCCACATCTGCTGGAAAGTAGACAGC
GAAGCCAGGATGGAGCCGCCGATCCAAACAGAGTACTTGCGTTCTGGCGG
GGCAACAATCTTAATCTTCATGGTGGACGGAGCCAACGCCGTGATTTCCT
TTTGCATGCGGTCAGCGATTCCCGGGTACATGGTGGTGCCGCCGGACAGC
ACAGTGTTGGCGTACAGATCCTTACGGATGTCGACGTCACACTTCATGAT
TGAGTTGTAGGTGGTCTCGTGAATGCCACAGGCCTCCATGCCGAGGAACG
ACGGCTGGAACAGCGATTCGGGGCAACGGAATCGCTCATTTCCGATGGTG
ATGACCTGTCCATCGGGCAACTCGTACGACTTCTCCAGGGACGAGCTTGA
AGCGGCCGTGGCCATCTCCTGCTCGAAGTCCAAGGCCACGTAGCACAGCT
TCTCCTTGATGTCGCGCACAATTTCACGCTCGGCGGTGGTGGTGAAGCTG
TAACCGCGCTCAGTAAGAATCTTCATCAGGTAGTCGGTTAAATCGCGACC
GGCTAGATCCAAACGGAGGATGGCGTGCGGCAGGGCGTAGCCCTCATAAA
TGGGCACAGTATGGGAGACACCGTCGCCGGAGTCCAACACGATACCTGTG
GTACGGCCGGAGGCGTAGAGAGAAAGCACCGCCTGGATGGCAACATACAT
GGCCGGAGTGTTGAAGGTTTCAAACATAATCTGAGTCATCTTCTCGCGAT
TAGCCTTGGGGTTTCAAGGAGCCTCA
BO15418.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12051-PA | 1131 | Act42A-RA | 321..1128 | 826..19 | 3990 | 99.7 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 334..695 | 813..452 | 860 | 89.5 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 334..689 | 813..458 | 805 | 89 | Minus |
| CG4027-PB | 1131 | Act5C-RB | 784..1128 | 363..19 | 800 | 89.2 | Minus |
| CG4027-PA | 1131 | Act5C-RA | 784..1128 | 363..19 | 800 | 89.2 | Minus |
| CG4027-PC | 1131 | Act5C-RC | 784..1128 | 363..19 | 800 | 89.2 | Minus |
| CG4027-PD | 1131 | Act5C-RD | 784..1128 | 363..19 | 800 | 89.2 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 334..578 | 813..569 | 425 | 86.9 | Minus |
| CG4027-PB | 1131 | Act5C-RB | 334..597 | 813..550 | 420 | 86.3 | Minus |
| CG4027-PA | 1131 | Act5C-RA | 334..597 | 813..550 | 420 | 86.3 | Minus |
| CG4027-PC | 1131 | Act5C-RC | 334..597 | 813..550 | 420 | 86.3 | Minus |
| CG4027-PD | 1131 | Act5C-RD | 334..597 | 813..550 | 420 | 86.3 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 784..923 | 363..224 | 325 | 89.2 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 706..892 | 441..255 | 310 | 86.6 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 463..597 | 684..550 | 300 | 88.8 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 463..597 | 684..550 | 300 | 88.8 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 1009..1104 | 138..43 | 280 | 91.6 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 847..956 | 300..191 | 275 | 90 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 601..695 | 546..452 | 275 | 91.5 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 601..695 | 546..452 | 275 | 91.5 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 601..695 | 546..452 | 275 | 91.5 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 994..1097 | 153..50 | 270 | 90.3 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 967..1103 | 180..44 | 260 | 87.5 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 967..1103 | 180..44 | 260 | 87.5 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 334..455 | 813..692 | 235 | 87.7 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 334..455 | 813..692 | 235 | 87.7 | Minus |
| CG4027-PB | 1131 | Act5C-RB | 601..689 | 546..458 | 220 | 89.8 | Minus |
| CG4027-PA | 1131 | Act5C-RA | 601..689 | 546..458 | 220 | 89.8 | Minus |
| CG4027-PC | 1131 | Act5C-RC | 601..689 | 546..458 | 220 | 89.8 | Minus |
| CG4027-PD | 1131 | Act5C-RD | 601..689 | 546..458 | 220 | 89.8 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 1000..1103 | 147..44 | 195 | 87.5 | Minus |
| CG4027-PB | 1131 | Act5C-RB | 710..779 | 437..368 | 150 | 88.5 | Minus |
| CG4027-PA | 1131 | Act5C-RA | 710..779 | 437..368 | 150 | 88.5 | Minus |
| CG4027-PC | 1131 | Act5C-RC | 710..779 | 437..368 | 150 | 88.5 | Minus |
| CG4027-PD | 1131 | Act5C-RD | 710..779 | 437..368 | 150 | 88.5 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 706..755 | 441..392 | 150 | 92 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 706..794 | 441..353 | 145 | 86.5 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 706..794 | 441..353 | 145 | 86.5 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 838..884 | 309..263 | 135 | 91.4 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 838..884 | 309..263 | 135 | 91.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act42A-RA | 1626 | CG12051-RA | 456..1263 | 826..19 | 4010 | 99.8 | Minus |
| Act5C-RE | 2863 | CG4027-RE | 495..1289 | 813..19 | 2400 | 86.8 | Minus |
| Act5C-RD | 1928 | CG4027-RD | 495..1289 | 813..19 | 2400 | 86.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:36:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6014273..6015080 | 19..826 | 4010 | 99.8 | Plus |
| X | 23542271 | X | 5903031..5903825 | 813..19 | 2400 | 86.8 | Minus |
| 2R | 25286936 | 2R | 20945137..20945931 | 813..19 | 2145 | 84.7 | Minus |
| 3R | 32079331 | 3R | 13426937..13427731 | 813..19 | 2115 | 84.4 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:36:27 has no hits.
BO15418.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:19 Download gff for
BO15418.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12051-PA | 322..1131 | 15..825 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:12 Download gff for
BO15418.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12051-PA | 322..1131 | 15..825 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:15 Download gff for
BO15418.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 457..1268 | 13..825 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:27 Download gff for
BO15418.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 457..1268 | 13..825 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:27 Download gff for
BO15418.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6014268..6015079 | 13..825 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:15 Download gff for
BO15418.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1901773..1902584 | 13..825 | 99 | | Plus |
BO15418.5prime Sequence
827 bp (804 high quality bases) assembled on 2006-05-29
> BO15418.5prime
GAAGTTATCAGTCGACATGTGTGACGAAGAGGTTGCAGCTTTAGTGGTCG
ACAACGGATCCGGCATGTGCAAAGCCGGCTTTGCCGGTGATGACGCACCG
CGTGCAGTTTTTCCTTCTATTGTCGGCCGTCCACGTCACCAGGGCGTAAT
GGTAGGAATGGGACAAAAGGACTCTTATGTCGGCGATGAGGCACAGAGCA
AACGTGGTATCCTTACCCTGAAGTACCCCATTGAGCACGGTATCGTGACT
AACTGGGACGACATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCT
TCGTGTGGCCCCGGAGGAGCACCCCGTCTTGCTTACTGAGGCTCCTTTGA
ACCCCAAGGCTAATCGCGAGAAGATGACTCAGATTATGTTTGAAACCTTC
AACACTCCGGCCATGTATGTTGCCATCCAGGCGGTGCTTTCTCTCTACGC
CTCCGGCCGTACCACAGGTATCGTGTTGGACTCCGGCGACGGTGTCTCCC
ATACTGTGCCCATTTATGAGGGCTACGCCCTGCCGCACGCCATCCTCCGT
TTGGATCTAGCCGGTCGCGATTTAACCGACTACCTGATGAAGATTCTTAC
TGAGCGCGGTTACAGCTTCACCACCACCGCCGAGCGTGAAATTGTGCGCG
ACATCAAGGAGAAGCTGTGCTACGTGGCCTTGGACTTCGAGCAGGAGATG
GCCACGGCCGCTTCAAGCTCGTCCCTGGAGAAGTCGTACGAGTTGCCCGA
TGGACAGGTCATCACCATCGGAAATGAGCGATTCCGTTGCCCCGAATCGC
TGTTCCCACCGTCGTTCCTCGGCATGG
BO15418.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12051-PA | 1131 | Act42A-RA | 1..811 | 17..827 | 4005 | 99.7 | Plus |
| CG7478-PA | 1131 | Act79B-RA | 235..695 | 251..711 | 1080 | 89.3 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 332..689 | 348..705 | 815 | 89.1 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 187..578 | 203..594 | 710 | 87.2 | Plus |
| CG4027-PB | 1131 | Act5C-RB | 112..311 | 128..327 | 450 | 89 | Plus |
| CG4027-PA | 1131 | Act5C-RA | 112..311 | 128..327 | 450 | 89 | Plus |
| CG4027-PC | 1131 | Act5C-RC | 112..311 | 128..327 | 450 | 89 | Plus |
| CG4027-PD | 1131 | Act5C-RD | 112..311 | 128..327 | 450 | 89 | Plus |
| CG4027-PB | 1131 | Act5C-RB | 332..597 | 348..613 | 430 | 86.4 | Plus |
| CG4027-PA | 1131 | Act5C-RA | 332..597 | 348..613 | 430 | 86.4 | Plus |
| CG4027-PC | 1131 | Act5C-RC | 332..597 | 348..613 | 430 | 86.4 | Plus |
| CG4027-PD | 1131 | Act5C-RD | 332..597 | 348..613 | 430 | 86.4 | Plus |
| CG18290-PA | 1131 | Act87E-RA | 112..312 | 128..328 | 380 | 87.5 | Plus |
| CG18290-PB | 1131 | Act87E-RB | 112..312 | 128..328 | 380 | 87.5 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 190..305 | 206..321 | 305 | 90.5 | Plus |
| CG18290-PA | 1131 | Act87E-RA | 463..597 | 479..613 | 300 | 88.8 | Plus |
| CG18290-PB | 1131 | Act87E-RB | 463..597 | 479..613 | 300 | 88.8 | Plus |
| CG18290-PA | 1131 | Act87E-RA | 601..695 | 617..711 | 275 | 91.5 | Plus |
| CG18290-PB | 1131 | Act87E-RB | 601..695 | 617..711 | 275 | 91.5 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 601..695 | 617..711 | 275 | 91.5 | Plus |
| CG18290-PA | 1131 | Act87E-RA | 332..455 | 348..471 | 245 | 87.9 | Plus |
| CG18290-PB | 1131 | Act87E-RB | 332..455 | 348..471 | 245 | 87.9 | Plus |
| CG4027-PB | 1131 | Act5C-RB | 601..689 | 617..705 | 220 | 89.8 | Plus |
| CG4027-PA | 1131 | Act5C-RA | 601..689 | 617..705 | 220 | 89.8 | Plus |
| CG4027-PC | 1131 | Act5C-RC | 601..689 | 617..705 | 220 | 89.8 | Plus |
| CG4027-PD | 1131 | Act5C-RD | 601..689 | 617..705 | 220 | 89.8 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 706..790 | 722..806 | 200 | 89.4 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 32..80 | 48..96 | 195 | 95.9 | Plus |
| CG4027-PB | 1131 | Act5C-RB | 710..779 | 726..795 | 150 | 88.5 | Plus |
| CG4027-PA | 1131 | Act5C-RA | 710..779 | 726..795 | 150 | 88.5 | Plus |
| CG4027-PC | 1131 | Act5C-RC | 710..779 | 726..795 | 150 | 88.5 | Plus |
| CG4027-PD | 1131 | Act5C-RD | 710..779 | 726..795 | 150 | 88.5 | Plus |
| CG7478-PA | 1131 | Act79B-RA | 706..755 | 722..771 | 150 | 92 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act42A-RA | 1626 | CG12051-RA | 136..946 | 17..827 | 4025 | 99.8 | Plus |
| Act88F-RA | 1595 | CG5178-RA | 95..905 | 17..827 | 2240 | 85.3 | Plus |
| Act57B-RA | 1724 | CG10067-RA | 97..907 | 17..827 | 2225 | 85 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6014590..6015400 | 827..17 | 4025 | 99.8 | Minus |
| 3R | 32079331 | 3R | 15440616..15441426 | 17..827 | 2240 | 85.1 | Plus |
| 3L | 28110227 | 3L | 21985349..21986161 | 15..827 | 2205 | 84.7 | Plus |
| 3R | 32079331 | 3R | 13426604..13427414 | 17..827 | 2165 | 84.5 | Plus |
| 2R | 25286936 | 2R | 20944846..20945614 | 59..827 | 2150 | 85.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:05:52 has no hits.
BO15418.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:20 Download gff for
BO15418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12051-PA | 1..811 | 17..827 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:13 Download gff for
BO15418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12051-PA | 1..811 | 17..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:58:46 Download gff for
BO15418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 136..946 | 17..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:47:12 Download gff for
BO15418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 136..946 | 17..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:47:12 Download gff for
BO15418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6014590..6015400 | 17..827 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:58:46 Download gff for
BO15418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1902095..1902905 | 17..827 | 99 | | Minus |
BO15418.complete Sequence
1162 bp (1162 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633451
> BO15418.complete
GAAGTTATCAGTCGACATGTGTGACGAAGAGGTTGCAGCTTTAGTGGTCG
ACAACGGATCCGGCATGTGCAAAGCCGGCTTTGCCGGTGATGACGCACCG
CGTGCAGTTTTTCCTTCTATTGTCGGCCGTCCACGTCACCAGGGCGTAAT
GGTAGGAATGGGACAAAAGGACTCTTATGTCGGCGATGAGGCACAGAGCA
AACGTGGTATCCTTACCCTGAAGTACCCCATTGAGCACGGTATCGTGACT
AACTGGGACGACATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCT
TCGTGTGGCCCCGGAGGAGCACCCCGTCTTGCTTACTGAGGCTCCTTTGA
ACCCCAAGGCTAATCGCGAGAAGATGACTCAGATTATGTTTGAAACCTTC
AACACTCCGGCCATGTATGTTGCCATCCAGGCGGTGCTTTCTCTCTACGC
CTCCGGCCGTACCACAGGTATCGTGTTGGACTCCGGCGACGGTGTCTCCC
ATACTGTGCCCATTTATGAGGGCTACGCCCTGCCGCACGCCATCCTCCGT
TTGGATCTAGCCGGTCGCGATTTAACCGACTACCTGATGAAGATTCTTAC
TGAGCGCGGTTACAGCTTCACCACCACCGCCGAGCGTGAAATTGTGCGCG
ACATCAAGGAGAAGCTGTGCTACGTGGCCTTGGACTTCGAGCAGGAGATG
GCCACGGCCGCTTCAAGCTCGTCCCTGGAGAAGTCGTACGAGTTGCCCGA
TGGACAGGTCATCACCATCGGAAATGAGCGATTCCGTTGCCCCGAATCGC
TGTTCCAGCCGTCGTTCCTCGGCATGGAGGCCTGTGGCATTCACGAGACC
ACCTACAACTCAATCATGAAGTGTGACGTCGACATCCGTAAGGATCTGTA
CGCCAACACTGTGCTGTCCGGCGGCACCACCATGTACCCGGGAATCGCTG
ACCGCATGCAAAAGGAAATCACGGCGTTGGCTCCGTCCACCATGAAGATT
AAGATTGTTGCCCCGCCAGAACGCAAGTACTCTGTTTGGATCGGCGGCTC
CATCCTGGCTTCGCTGTCTACTTTCCAGCAGATGTGGATCTCGAAGCAAG
AGTACGACGAGTCGGGCCCCTCCATTGTTCACCGCAAGTGCTTCGCAAGC
TTTCTAGACCAT
BO15418.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act42A-RA | 1131 | CG12051-PA | 1..1128 | 17..1144 | 5640 | 100 | Plus |
| Act5C-RE | 1131 | CG4027-PE | 1..1128 | 17..1144 | 3300 | 86.2 | Plus |
| Act5C-RD | 1131 | CG4027-PD | 1..1128 | 17..1144 | 3300 | 86.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act42A-RA | 1626 | CG12051-RA | 136..1263 | 17..1144 | 5640 | 100 | Plus |
| Act5C-RE | 2863 | CG4027-RE | 162..1289 | 17..1144 | 3300 | 86.2 | Plus |
| Act5C-RD | 1928 | CG4027-RD | 162..1289 | 17..1144 | 3300 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:34:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6014273..6015400 | 1144..17 | 5640 | 100 | Minus |
| X | 23542271 | X | 5902698..5903825 | 17..1144 | 3300 | 86.2 | Plus |
| 2R | 25286936 | 2R | 20944846..20945931 | 59..1144 | 2940 | 84.7 | Plus |
| 3R | 32079331 | 3R | 13426604..13427731 | 17..1144 | 2940 | 84 | Plus |
| 3R | 32079331 | 3R | 15440616..15441538 | 17..939 | 2635 | 85.7 | Plus |
| 3L | 28110227 | 3L | 21985349..21986270 | 15..936 | 2555 | 85.1 | Plus |
| 3L | 28110227 | 3L | 21986640..21986840 | 944..1144 | 600 | 86.6 | Plus |
| 3R | 32079331 | 3R | 15441616..15441803 | 956..1143 | 475 | 83.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:34:06 has no hits.
BO15418.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:45 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 1..1131 | 17..1148 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:59 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 132..1264 | 17..1150 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:39 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 136..1263 | 17..1146 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:45 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 132..1264 | 17..1150 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:25 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act42A-RA | 136..1263 | 17..1146 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:25 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6014271..6015400 | 17..1146 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:39 Download gff for
BO15418.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1901776..1902905 | 17..1146 | 99 | | Minus |
BO15418.pep Sequence
Translation from 16 to 1162
> BO15418.pep
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ
KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT
IGNERFRCPESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASL
STFQQMWISKQEYDESGPSIVHRKCFASFLDH
BO15418.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act42A-PA | 376 | CG12051-PA | 1..376 | 1..376 | 1966 | 100 | Plus |
| Act5C-PE | 376 | CG4027-PE | 1..376 | 1..376 | 1962 | 99.5 | Plus |
| Act5C-PD | 376 | CG4027-PD | 1..376 | 1..376 | 1962 | 99.5 | Plus |
| Act5C-PC | 376 | CG4027-PC | 1..376 | 1..376 | 1962 | 99.5 | Plus |
| Act5C-PA | 376 | CG4027-PA | 1..376 | 1..376 | 1962 | 99.5 | Plus |
