Clone Sequence Records
BO15419.3prime Sequence
764 bp (720 high quality bases) assembled on 2006-05-29
> BO15419.3prime
ATGGTCTAGAAAGCTTGCCGACTCGGGGCGTTTAAATTCCAATTCAATAC
ATTCGTCAGGTAATTGTGAATAGCTGCTACTAGTAGCACTGAAGGAAACA
TTAAGTTTGGGATGTTTAAAGTGCTTCGAAACCAAGTCATCCTTGCCGGT
TTTATAAAAATGCATTTTCAAAGGCTTCGTTCGCTGATTTAGAGCGCGGT
TCATTGTTGACTTGCTGAAGGCAAAGAACTCGTCGTACAAAACATGGTTG
ATCATGCTGAATTCCCTGAGACGGGGACAGGCAAGAAGCACGTCCCATAT
ACCATCGGCGTTGACCCATATACGCGAGTTCTCCAGATGCAGTTGCTCCA
AGAGCGGAAAGCAATAGGTGATCGTGGAAAAGTCAATGGCAGCACATCCT
TCATCATCGACGAGAGTTAAACATCGGAGATTTCGCAGTTTGGCCAGCAC
CTCCGTTGGCCTCATCCAGATATTATTACTGAATGCGGCAGTCAACACAT
CTTGACCCCTTATGCTTCCAATTTCGCACAGTAGATCGTCCACCTGGTAG
AAGTTGTGCAGGCGCAGCTTTATCAGTTTAGGCAGGCTCAACAGTTGGCT
GATGTTGTCCCTGTTTAGGTAAACTATGTCCAGCTCCAGCTCCTCCAGTT
CATGCAGCATACAGATGGATCGCACGTATGCATTCTGTTCGATCTTTTGC
CACTGGATACTGAGTGTCTGTAGTCGCAGGTTTTGACAGATATCCTCGAA
GCCCTGCGGGCTCA
BO15419.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-PA | 1227 | CG31633-RA | 479..1224 | 764..19 | 3730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:24:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1452 | CG31633-RA | 567..1312 | 764..19 | 3730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:24:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6655068..6655701 | 131..764 | 3170 | 100 | Plus |
2L | 23513712 | 2L | 6654900..6655014 | 19..133 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:24:26 has no hits.
BO15419.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:21 Download gff for
BO15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 480..1227 | 16..763 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:15 Download gff for
BO15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 480..1227 | 16..763 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:59:24 Download gff for
BO15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 568..1312 | 19..763 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:47:48 Download gff for
BO15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 568..1312 | 19..763 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:47:48 Download gff for
BO15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6654900..6655013 | 19..132 | 100 | <- | Plus |
2L | 6655070..6655700 | 133..763 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:59:24 Download gff for
BO15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6654900..6655013 | 19..132 | 100 | <- | Plus |
arm_2L | 6655070..6655700 | 133..763 | 100 | | Plus |
BO15419.5prime Sequence
799 bp (747 high quality bases) assembled on 2006-05-29
> BO15419.5prime
GAAGTTATCAGTCGACATGGCACTCATTGAGAACCTCAATGATGACTGCG
TGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTGAAGCTGTGG
AAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATCCTACATCTG
GCAGCGCAATCGGGAATATACCATTGACTATTATACATTCAATGACGACT
ATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACGGTGACGGAA
CTTACACTCCAATACCTAGCCATGGATCACCTGGAGCGGTGGAAGGGTCA
CACCTTCCCCAACATGCGTCAATTGATCTACTTGGGCGATGAGACCAGTG
AAATAGAAGGAGACGCCGACATCGCCATTCTGGTGGACTGCTTCCCGCAG
CTGGAAGCCATCAGGCTGAGCGGGAAGACTACTGGTAACCACATCAGTCG
TTGGCGGAACATTCGCCGACTGGACCTTCAGCTGTGCTGGTACCTGAGCC
CGCAGGGCTTCGAGGATATCTGTCAAAACCTGCGACTACAGACACTCAGT
ATCCAGTGGCAAAAGATCGAACAGAATGCATACGTGCGATCCATCTGTAT
GCTGCATGAACTGGAGGAGCTGGAGCTGGACATAGTTTACCTAAACAGGG
ACAACATCAGCCAACTGTTGAGCCTGCCTAAACTGATAAAGCTGCGCCTG
CACAACTTCTACCAGGTGGACGATCTACTGTGCGAAATTGGAAGCATAAG
GGGTCAAGATGTGTTGACTGCCGCATTCAGTAATAATATCTGGATGAGG
BO15419.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-PA | 1227 | CG31633-RA | 1..783 | 17..799 | 3915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1452 | CG31633-RA | 87..871 | 15..799 | 3925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6655397..6656141 | 799..55 | 3725 | 100 | Minus |
2L | 23513712 | 2L | 6656196..6656235 | 54..15 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:20:26 has no hits.
BO15419.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:22 Download gff for
BO15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 1..783 | 17..799 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:16 Download gff for
BO15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 1..783 | 17..799 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:58:18 Download gff for
BO15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 79..871 | 6..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:58:21 Download gff for
BO15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 79..871 | 6..799 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:58:21 Download gff for
BO15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6655397..6656141 | 55..799 | 100 | <- | Minus |
2L | 6656196..6656233 | 17..54 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:58:18 Download gff for
BO15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6655397..6656141 | 55..799 | 100 | <- | Minus |
arm_2L | 6656196..6656233 | 17..54 | 100 | -> | Minus |
BO15419.complete Sequence
1258 bp (1258 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633452
> BO15419.complete
GAAGTTATCAGTCGACATGGCACTCATTGAGAACCTCAATGATGACTGCG
TGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTGAAGCTGTGG
AAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATCCTACATCTG
GCAGCGCAATCGGGAATATACCATTGACTATTATACATTCAATGACGACT
ATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACGGTGACGGAA
CTTACACTCCAATACCTAGCCATGGATCACCTGGAGCGGTGGAAGGGTCA
CACCTTCCCCAACATGCGTCAATTGATCTACTTGGGCGATGAGACCAGTG
AAATAGAAGGAGACGCCGACATCGCCATTCTGGTGGACTGCTTCCCGCAG
CTGGAAGCCATCAGGCTGAGCGGGAAGACTACTGGTAACCACATCAGTCG
TTGGCGGAACATTCGCCGACTGGACCTTCAGCTGTGCTGGTACCTGAGCC
CGCAGGGCTTCGAGGATATCTGTCAAAACCTGCGACTACAGACACTCAGT
ATCCAGTGGCAAAAGATCGAACAGAATGCATACGTGCGATCCATCTGTAT
GCTGCATGAACTGGAGGAGCTGGAGCTGGACATAGTTTACCTAAACAGGG
ACAACATCAGCCAACTGTTGAGCCTGCCTAAACTGATAAAGCTGCGCCTG
CACAACTTCTACCAGGTGGACGATCTACTGTGCGAAATTGGAAGCATAAG
GGGTCAAGATGTGTTGACTGCCGCATTCAGTAATAATATCTGGATGAGGC
CAACGGAGGTGCTGGCCAAACTGCGAAATCTCCGATGTTTAACTCTCGTC
GATGATGAAGGATGTGCTGCCATTGACTTTTCCACGATCACCTATTGCTT
TCCGCTCTTGGAGCAACTGCATCTGGAGAACTCGCGTATATGGGTCAACG
CCGATGGTATATGGGACGTGCTTCTTGCCTGTCCCCGTCTCAGGGAATTC
AGCATGATCAACCATGTTTTGTACGACGAGTTCTTTGCCTTCAGCAAGTC
AACAATGAACCGCGCTCTAAATCAGCGAACGAAGCCTTTGAAAATGCATT
TTTATAAAACCGGCAAGGATGACTTGGTTTCGAAGCACTTTAAACATCCC
AAACTTAATGTTTCCTTCAGTGCTACTAGTAGCAGCTATTCACAATTACC
TGACGAATGTATTGAATTGGAATTTAAACGCCCCGAGTCGGCAAGCTTTC
TAGACCAT
BO15419.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1227 | CG31633-PA | 1..1224 | 17..1240 | 6120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1452 | CG31633-RA | 87..1312 | 15..1240 | 6130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6655068..6656141 | 1128..55 | 5370 | 100 | Minus |
2L | 23513712 | 2L | 6654900..6655014 | 1240..1126 | 575 | 100 | Minus |
2L | 23513712 | 2L | 6656196..6656235 | 54..15 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:35:36 has no hits.
BO15419.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:46 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 1..1227 | 17..1243 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:03 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 69..1292 | 17..1242 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:30:58 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 89..1312 | 17..1242 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:46 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 59..1292 | 6..1240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:59 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 89..1312 | 17..1242 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:59 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6654897..6655013 | 1127..1242 | 98 | <- | Minus |
2L | 6655070..6656141 | 55..1126 | 100 | <- | Minus |
2L | 6656196..6656233 | 17..54 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:30:58 Download gff for
BO15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6654897..6655013 | 1127..1242 | 98 | <- | Minus |
arm_2L | 6655070..6656141 | 55..1126 | 100 | <- | Minus |
arm_2L | 6656196..6656233 | 17..54 | 100 | | Minus |
BO15419.pep Sequence
Translation from 16 to 1258
> BO15419.pep
MALIENLNDDCVLKIVDYLDLEDQLKLWKSSEPASRLRSLISYIWQRNRE
YTIDYYTFNDDYELLNEFLQCIRFTVTELTLQYLAMDHLERWKGHTFPNM
RQLIYLGDETSEIEGDADIAILVDCFPQLEAIRLSGKTTGNHISRWRNIR
RLDLQLCWYLSPQGFEDICQNLRLQTLSIQWQKIEQNAYVRSICMLHELE
ELELDIVYLNRDNISQLLSLPKLIKLRLHNFYQVDDLLCEIGSIRGQDVL
TAAFSNNIWMRPTEVLAKLRNLRCLTLVDDEGCAAIDFSTITYCFPLLEQ
LHLENSRIWVNADGIWDVLLACPRLREFSMINHVLYDEFFAFSKSTMNRA
LNQRTKPLKMHFYKTGKDDLVSKHFKHPKLNVSFSATSSSYSQLPDECIE
LEFKRPESASFLDH
BO15419.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-PA | 408 | CG31633-PA | 1..408 | 1..408 | 2158 | 100 | Plus |
CG13088-PA | 401 | CG13088-PA | 1..380 | 4..384 | 365 | 29 | Plus |