Clone BO15419 Report

Search the DGRC for BO15419

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG31633-RA
Protein status:BO15419.pep: validated full length
Sequenced Size:1258

Clone Sequence Records

BO15419.3prime Sequence

764 bp (720 high quality bases) assembled on 2006-05-29

> BO15419.3prime
ATGGTCTAGAAAGCTTGCCGACTCGGGGCGTTTAAATTCCAATTCAATAC
ATTCGTCAGGTAATTGTGAATAGCTGCTACTAGTAGCACTGAAGGAAACA
TTAAGTTTGGGATGTTTAAAGTGCTTCGAAACCAAGTCATCCTTGCCGGT
TTTATAAAAATGCATTTTCAAAGGCTTCGTTCGCTGATTTAGAGCGCGGT
TCATTGTTGACTTGCTGAAGGCAAAGAACTCGTCGTACAAAACATGGTTG
ATCATGCTGAATTCCCTGAGACGGGGACAGGCAAGAAGCACGTCCCATAT
ACCATCGGCGTTGACCCATATACGCGAGTTCTCCAGATGCAGTTGCTCCA
AGAGCGGAAAGCAATAGGTGATCGTGGAAAAGTCAATGGCAGCACATCCT
TCATCATCGACGAGAGTTAAACATCGGAGATTTCGCAGTTTGGCCAGCAC
CTCCGTTGGCCTCATCCAGATATTATTACTGAATGCGGCAGTCAACACAT
CTTGACCCCTTATGCTTCCAATTTCGCACAGTAGATCGTCCACCTGGTAG
AAGTTGTGCAGGCGCAGCTTTATCAGTTTAGGCAGGCTCAACAGTTGGCT
GATGTTGTCCCTGTTTAGGTAAACTATGTCCAGCTCCAGCTCCTCCAGTT
CATGCAGCATACAGATGGATCGCACGTATGCATTCTGTTCGATCTTTTGC
CACTGGATACTGAGTGTCTGTAGTCGCAGGTTTTGACAGATATCCTCGAA
GCCCTGCGGGCTCA

BO15419.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-PA 1227 CG31633-RA 479..1224 764..19 3730 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:24:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-RA 1452 CG31633-RA 567..1312 764..19 3730 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6655068..6655701 131..764 3170 100 Plus
2L 23513712 2L 6654900..6655014 19..133 575 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:24:26 has no hits.

BO15419.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:21 Download gff for BO15419.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-PA 480..1227 16..763 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:15 Download gff for BO15419.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-PA 480..1227 16..763 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:59:24 Download gff for BO15419.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 568..1312 19..763 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:47:48 Download gff for BO15419.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 568..1312 19..763 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:47:48 Download gff for BO15419.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6654900..6655013 19..132 100 <- Plus
2L 6655070..6655700 133..763 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:59:24 Download gff for BO15419.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6654900..6655013 19..132 100 <- Plus
arm_2L 6655070..6655700 133..763 100   Plus

BO15419.5prime Sequence

799 bp (747 high quality bases) assembled on 2006-05-29

> BO15419.5prime
GAAGTTATCAGTCGACATGGCACTCATTGAGAACCTCAATGATGACTGCG
TGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTGAAGCTGTGG
AAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATCCTACATCTG
GCAGCGCAATCGGGAATATACCATTGACTATTATACATTCAATGACGACT
ATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACGGTGACGGAA
CTTACACTCCAATACCTAGCCATGGATCACCTGGAGCGGTGGAAGGGTCA
CACCTTCCCCAACATGCGTCAATTGATCTACTTGGGCGATGAGACCAGTG
AAATAGAAGGAGACGCCGACATCGCCATTCTGGTGGACTGCTTCCCGCAG
CTGGAAGCCATCAGGCTGAGCGGGAAGACTACTGGTAACCACATCAGTCG
TTGGCGGAACATTCGCCGACTGGACCTTCAGCTGTGCTGGTACCTGAGCC
CGCAGGGCTTCGAGGATATCTGTCAAAACCTGCGACTACAGACACTCAGT
ATCCAGTGGCAAAAGATCGAACAGAATGCATACGTGCGATCCATCTGTAT
GCTGCATGAACTGGAGGAGCTGGAGCTGGACATAGTTTACCTAAACAGGG
ACAACATCAGCCAACTGTTGAGCCTGCCTAAACTGATAAAGCTGCGCCTG
CACAACTTCTACCAGGTGGACGATCTACTGTGCGAAATTGGAAGCATAAG
GGGTCAAGATGTGTTGACTGCCGCATTCAGTAATAATATCTGGATGAGG

BO15419.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-PA 1227 CG31633-RA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-RA 1452 CG31633-RA 87..871 15..799 3925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6655397..6656141 799..55 3725 100 Minus
2L 23513712 2L 6656196..6656235 54..15 200 100 Minus
Blast to na_te.dros performed on 2015-02-12 00:20:26 has no hits.

BO15419.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:22 Download gff for BO15419.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-PA 1..783 17..799 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:16 Download gff for BO15419.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-PA 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:58:18 Download gff for BO15419.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 79..871 6..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:58:21 Download gff for BO15419.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 79..871 6..799 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:58:21 Download gff for BO15419.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6655397..6656141 55..799 100 <- Minus
2L 6656196..6656233 17..54 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:58:18 Download gff for BO15419.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6655397..6656141 55..799 100 <- Minus
arm_2L 6656196..6656233 17..54 100 -> Minus

BO15419.complete Sequence

1258 bp (1258 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633452

> BO15419.complete
GAAGTTATCAGTCGACATGGCACTCATTGAGAACCTCAATGATGACTGCG
TGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTGAAGCTGTGG
AAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATCCTACATCTG
GCAGCGCAATCGGGAATATACCATTGACTATTATACATTCAATGACGACT
ATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACGGTGACGGAA
CTTACACTCCAATACCTAGCCATGGATCACCTGGAGCGGTGGAAGGGTCA
CACCTTCCCCAACATGCGTCAATTGATCTACTTGGGCGATGAGACCAGTG
AAATAGAAGGAGACGCCGACATCGCCATTCTGGTGGACTGCTTCCCGCAG
CTGGAAGCCATCAGGCTGAGCGGGAAGACTACTGGTAACCACATCAGTCG
TTGGCGGAACATTCGCCGACTGGACCTTCAGCTGTGCTGGTACCTGAGCC
CGCAGGGCTTCGAGGATATCTGTCAAAACCTGCGACTACAGACACTCAGT
ATCCAGTGGCAAAAGATCGAACAGAATGCATACGTGCGATCCATCTGTAT
GCTGCATGAACTGGAGGAGCTGGAGCTGGACATAGTTTACCTAAACAGGG
ACAACATCAGCCAACTGTTGAGCCTGCCTAAACTGATAAAGCTGCGCCTG
CACAACTTCTACCAGGTGGACGATCTACTGTGCGAAATTGGAAGCATAAG
GGGTCAAGATGTGTTGACTGCCGCATTCAGTAATAATATCTGGATGAGGC
CAACGGAGGTGCTGGCCAAACTGCGAAATCTCCGATGTTTAACTCTCGTC
GATGATGAAGGATGTGCTGCCATTGACTTTTCCACGATCACCTATTGCTT
TCCGCTCTTGGAGCAACTGCATCTGGAGAACTCGCGTATATGGGTCAACG
CCGATGGTATATGGGACGTGCTTCTTGCCTGTCCCCGTCTCAGGGAATTC
AGCATGATCAACCATGTTTTGTACGACGAGTTCTTTGCCTTCAGCAAGTC
AACAATGAACCGCGCTCTAAATCAGCGAACGAAGCCTTTGAAAATGCATT
TTTATAAAACCGGCAAGGATGACTTGGTTTCGAAGCACTTTAAACATCCC
AAACTTAATGTTTCCTTCAGTGCTACTAGTAGCAGCTATTCACAATTACC
TGACGAATGTATTGAATTGGAATTTAAACGCCCCGAGTCGGCAAGCTTTC
TAGACCAT

BO15419.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-RA 1227 CG31633-PA 1..1224 17..1240 6120 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-RA 1452 CG31633-RA 87..1312 15..1240 6130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6655068..6656141 1128..55 5370 100 Minus
2L 23513712 2L 6654900..6655014 1240..1126 575 100 Minus
2L 23513712 2L 6656196..6656235 54..15 200 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:35:36 has no hits.

BO15419.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:46 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 1..1227 17..1243 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:03 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 69..1292 17..1242 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:30:58 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 89..1312 17..1242 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:46 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 59..1292 6..1240 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:59 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
CG31633-RA 89..1312 17..1242 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:59 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6654897..6655013 1127..1242 98 <- Minus
2L 6655070..6656141 55..1126 100 <- Minus
2L 6656196..6656233 17..54 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:30:58 Download gff for BO15419.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6654897..6655013 1127..1242 98 <- Minus
arm_2L 6655070..6656141 55..1126 100 <- Minus
arm_2L 6656196..6656233 17..54 100   Minus

BO15419.pep Sequence

Translation from 16 to 1258

> BO15419.pep
MALIENLNDDCVLKIVDYLDLEDQLKLWKSSEPASRLRSLISYIWQRNRE
YTIDYYTFNDDYELLNEFLQCIRFTVTELTLQYLAMDHLERWKGHTFPNM
RQLIYLGDETSEIEGDADIAILVDCFPQLEAIRLSGKTTGNHISRWRNIR
RLDLQLCWYLSPQGFEDICQNLRLQTLSIQWQKIEQNAYVRSICMLHELE
ELELDIVYLNRDNISQLLSLPKLIKLRLHNFYQVDDLLCEIGSIRGQDVL
TAAFSNNIWMRPTEVLAKLRNLRCLTLVDDEGCAAIDFSTITYCFPLLEQ
LHLENSRIWVNADGIWDVLLACPRLREFSMINHVLYDEFFAFSKSTMNRA
LNQRTKPLKMHFYKTGKDDLVSKHFKHPKLNVSFSATSSSYSQLPDECIE
LEFKRPESASFLDH

BO15419.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG31633-PA 408 CG31633-PA 1..408 1..408 2158 100 Plus
CG13088-PA 401 CG13088-PA 1..380 4..384 365 29 Plus