Clone Sequence Records
BO15421.3prime Sequence
889 bp (768 high quality bases) assembled on 2006-05-29
> BO15421.3prime
ATGGTCTAGAAAGCTTGCGAACTCCCTGATGCCCGCACTGGTGGTGGTGC
TGCCCGGTGGCCCACCTCCTCCCCCGCTTCCGCTCGCTCCCGACACATTG
GGCTTGGATTCGCTGGAGGTGTGCACGCTGGGGCTCTGTGATTTGTCCTG
CTCCTCGTGACCATTTGGCGTTTCTTCGTAGCGAACGTAGGGTTCGAAGC
TGTTGTTGATTTGCACAGATCCGCGATGCAGATTGTTGGACTCGGCCTCG
AAGAGAATCTCGTTGATGAAGCGTTCGGCCAGAAGACGCTGCTCGCGCGG
CAGTCGCTTCAGTTTGTGCGTCCAGGTGCGGGCGATGGACTCCTCCTCCG
GATATGTGCCAGCCAAATACTCGCAGGCTATGTTGAGTAGTTCGTCGGTG
TTGTGGGCGGTGCCTGTTGCACCTGGACCGCCAGTAGATCCGGCTCCTGC
TCCCGTACATGGCGGTGTTTGCCTGGCTCGCTTGCTGCTCCCATAATCCA
CATGGTTGGTTGCTGGCGGTGGCGGTGGCGGAGCTCCAAATGATTTGTGA
AACATCTCGGAAATGTTGGGCGTCTGACCACCAGCGCGTGGTGCTGGATA
ATGGAGGGCTGCTCCCTGGCTCTCCAGAAACGCACTCGGGCAATTGCTGC
TCTCACCGAAGGCGAAGTTGGGCTCGTTCTTAAAGGCGGGATTGACGGCT
AGAAACTTCTCCGAGTTGCGCAGAAAGTCCAGCTCCTGAAAGGTCCAGCA
GCGTGGACTGTGGAGGCTGCCCGATCGCAGGGCACTCTCCACCACCTTTA
GCTCCTTGCGGTAGTTCGTGCGCAGTGTGTTGATCTTCTTTTTCACATCC
TCCACGGTGGCGTCCCGCTTGAAATAATGGTATATGGGC
BO15421.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-PA | 1047 | CG8281-RA | 174..1044 | 889..19 | 4180 | 99.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:41:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-RA | 1301 | CG8281-RA | 318..1188 | 889..19 | 4250 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7912780..7913650 | 889..19 | 4250 | 99.2 | Minus |
Blast to na_te.dros performed on 2015-02-02 18:41:03 has no hits.
BO15421.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:23 Download gff for
BO15421.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-PA | 174..1047 | 15..889 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:18 Download gff for
BO15421.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-PA | 174..1047 | 15..889 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:49:23 Download gff for
BO15421.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 318..1197 | 6..889 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:03:22 Download gff for
BO15421.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 318..1197 | 6..889 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:03:22 Download gff for
BO15421.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7912780..7913659 | 6..889 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:49:23 Download gff for
BO15421.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7905880..7906759 | 6..889 | 98 | | Minus |
BO15421.5prime Sequence
818 bp (731 high quality bases) assembled on 2006-05-29
> BO15421.5prime
GAAGTTATCAGTCGACATGCTGCCACAAACGCCGCCGCACGGATTGAAGG
TGATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAG
ACATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACAC
CAATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACC
ATTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAAC
ACACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGTGGAGAGTGCCCT
GCGATCGGGCAGCCTCCACAGTCCACGCTGCTGGACCTTTCAGGAGCTGG
ACTTTCTGCGCAACTCGGAGAAGTTTCTAGCCGTCAATCCCGCCTTTAAG
AACGAGCCCAACTTCGCCTTCGGTGAGAGCAGCAATTGCCCGAGTGCGTT
TCTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCACGCGCTGGTG
GTCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCG
CCACCGCCACCGCCAGCAACCAACCATGTGGATTATGGGAGCAGCAAGCG
AGCCAGGCAAACACCGCCATGTACGGGAGCAGGAGCCGGATCTACTGGCG
GTCCAGGTGCAACAGGCACCGCCCACAACACCGACGAACTACTCAACATA
GCCTGCGAGTATTTGGCTGGCACATATCCGGAGGAGGAGTCCATCGCCCG
CACCTGGACGCACAAACTGAAGCGACTGCCGCGCGAGCAGCGTCTTCTGG
CCGAACGCTTCATCAACG
BO15421.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-PA | 1047 | CG8281-RA | 1..802 | 17..818 | 3860 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 07:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-RA | 1301 | CG8281-RA | 145..946 | 17..818 | 3920 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 07:54:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7912607..7913408 | 17..818 | 3920 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-02 07:54:41 has no hits.
BO15421.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:25 Download gff for
BO15421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-PA | 1..802 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:20 Download gff for
BO15421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-PA | 1..802 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:45:31 Download gff for
BO15421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 145..946 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:15:56 Download gff for
BO15421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 145..946 | 17..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:15:56 Download gff for
BO15421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7912607..7913408 | 17..818 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:45:31 Download gff for
BO15421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7905707..7906508 | 17..818 | 99 | | Plus |
BO15421.complete Sequence
1078 bp (1078 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633453
> BO15421.complete
GAAGTTATCAGTCGACATGCTGCCACAAACGCCGCCGCACGGATTGAAGG
TGATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAG
ACATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACAC
CAATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACC
ATTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAAC
ACACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGTGGAGAGTGCCCT
GCGATCGGGCAGCCTCCACAGTCCACGCTGCTGGACCTTTCAGGAGCTGG
ACTTTCTGCGCAACTCGGAGAAGTTTCTAGCCGTCAATCCCGCCTTTAAG
AACGAGCCCAACTTCGCCTTCGGTGAGAGCAGCAATTGCCCGAGTGCGTT
TCTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCACGCGCTGGTG
GTCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCG
CCACCGCCACCGCCAGCAACCAACCATGTGGATTATGGGAGCAGCAAGCG
AGCCAGGCAAACACCGCCATGTACGGGAGCAGGAGCCGGATCTACTGGCG
GTCCAGGTGCAACAGGCACCGCCCACAACACCGACGAACTACTCAACATA
GCCTGCGAGTATTTGGCTGGCACATATCCGGAGGAGGAGTCCATCGCCCG
CACCTGGACGCACAAACTGAAGCGACTGCCGCGCGAGCAGCGTCTTCTGG
CCGAACGCTTCATCAACGAGATTCTCTTCGAGGCCGAGTCCAACAATCTG
CATCGCGGATCTGTGCAAATCAACAACAGCTTCGAACCCTACGTTCGCTA
CGAAGAAACGCCAAATGGTCACGAGGAGCAGGACAAATCACAGAGCCCCA
GCGTGCACACCTCCAGCGAATCCAAGCCCAATGTGTCGGGAGCGAGCGGA
AGCGGGGGAGGAGGTGGGCCACCGGGCAGCACCACCACCAGTGCGGGCAT
CAGGGAGTTCGCAAGCTTTCTAGACCAT
BO15421.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:38:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-RA | 1047 | CG8281-PA | 1..1044 | 17..1060 | 5115 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:38:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-RA | 1301 | CG8281-RA | 145..1188 | 17..1060 | 5115 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:38:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7912607..7913650 | 17..1060 | 5115 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:38:21 has no hits.
BO15421.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:47 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 1..1047 | 17..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:50 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 145..1191 | 17..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:47 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 145..1188 | 17..1062 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:47 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 145..1191 | 17..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:52:29 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8281-RA | 145..1188 | 17..1062 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:52:29 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7912607..7913650 | 17..1062 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:47 Download gff for
BO15421.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7905707..7906750 | 17..1062 | 99 | | Plus |
BO15421.pep Sequence
Translation from 16 to 1078
> BO15421.pep
MLPQTPPHGLKVMSGAEENRHYLRAFIQTYRDLPVLWDTSLRDYTNREKR
AEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKVVESALRSGSL
HSPRCWTFQELDFLRNSEKFLAVNPAFKNEPNFAFGESSNCPSAFLESQG
AALHYPAPRAGGQTPNISEMFHKSFGAPPPPPPATNHVDYGSSKRARQTP
PCTGAGAGSTGGPGATGTAHNTDELLNIACEYLAGTYPEEESIARTWTHK
LKRLPREQRLLAERFINEILFEAESNNLHRGSVQINNSFEPYVRYEETPN
GHEEQDKSQSPSVHTSSESKPNVSGASGSGGGGGPPGSTTTSAGIREFAS
FLDH
BO15421.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8281-PA | 348 | CG8281-PA | 1..348 | 1..348 | 1856 | 100 | Plus |
| CG4004-PE | 319 | CG4004-PE | 16..105 | 23..115 | 166 | 34.4 | Plus |
| CG4004-PD | 319 | CG4004-PD | 16..105 | 23..115 | 166 | 34.4 | Plus |
| CG4004-PA | 319 | CG4004-PA | 16..105 | 23..115 | 166 | 34.4 | Plus |
| CG4004-PB | 339 | CG4004-PB | 1..83 | 33..118 | 153 | 38.4 | Plus |
