Clone BO15425 Report

Search the DGRC for BO15425

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG10981-RA
Protein status:BO15425.pep: validated full length
Sequenced Size:991

Clone Sequence Records

BO15425.3prime Sequence

618 bp (575 high quality bases) assembled on 2006-05-29

> BO15425.3prime
ATGGTCTAGAAAGCTTGCCAAGTAAATGCGAAAGAATTGACGTGCGGTCA
GCTTCTTGTTGCATATTGGGCACTTGTGCGTAGCTCTGATGGCTGTTTCG
ATGCATTCGCGGCAGAAGACGTGTCCACATTTGGTTGACACTGGCTCGCG
CTTCGATACACTGTCCATGCAGATGGGGCACTTGTATAACTCCTCTTTTT
GGGACTCATCAATGTCGCGATTAACGCGTTTTGGTGGCGACGCAACGTCG
AGATCCACTACCGGGTCATTTTCGGCTGACCGACGTGGCAGAATGGTGAG
GGAGTCGTTGGAGTGAAGATTCACTGTGCGACTTCTTGGGCCTTCGGGGG
TGCATAGATCGATGAAAGCATCGGGATCACGATTCCGAGCGGATCGAACA
GGTGGTGCACGGTCCAAATGGGACAGATCTATCACTTCTACTGGACTCGT
TCTGCGGCGAATTCTACGAGTTGTTGGCGTTGAGGTTCTCGTGGCGAAGG
TGTCAATCTGTGCCACAACTTCCTCGCAGTAGCGATTCATGCGATCCAAC
TCTGCTTCCATCTGGATCACATCCTGGGTAAGTGATCTGATCTGCGAATG
AGCATCTTCAGTCGAGAC

BO15425.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10981-PA 960 CG10981-RA 358..957 618..19 3000 100 Minus
CG10981-PB 939 CG10981-RB 337..936 618..19 3000 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RB 1611 CG10981-RB 671..1270 618..19 3000 100 Minus
dgrn-RA 1632 CG10981-RA 692..1291 618..19 3000 100 Minus
dgrn-RD 1635 CG10981-RD 695..1294 618..19 3000 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:36:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825805..5826235 449..19 2155 100 Minus
3R 32079331 3R 5825499..5825588 539..450 450 100 Minus
3R 32079331 3R 5825366..5825444 618..540 395 100 Minus
Blast to na_te.dros performed on 2015-02-12 23:36:56 has no hits.

BO15425.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:30 Download gff for BO15425.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PB 337..939 15..618 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:26 Download gff for BO15425.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PB 337..939 15..618 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 16:54:30 Download gff for BO15425.3prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 702..1310 8..618 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:12:18 Download gff for BO15425.3prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RD 695..1303 8..618 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:12:18 Download gff for BO15425.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5825366..5825444 540..618 100 -> Minus
3R 5825499..5825588 450..539 100 -> Minus
3R 5825805..5826244 8..449 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 16:54:30 Download gff for BO15425.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1651088..1651166 540..618 100 -> Minus
arm_3R 1651221..1651310 450..539 100 -> Minus
arm_3R 1651527..1651966 8..449 99   Minus

BO15425.5prime Sequence

834 bp (719 high quality bases) assembled on 2006-05-29

> BO15425.5prime
GAAGTTATCAGTCGACATGTCAGATTCGACTATTTTCCGTTTTAACTCAT
CCATTCTTGATCAGTCAGCGGACAGCAACGTATCCAGTTCGAGCTCCAAT
TCCAGTGTATCCGACTCTTCTGTGGACTCCCATTCATCCATAGAATCCAA
TTCGGGACACAATACATCCGTGGAATCTCAGTCATCCGCGGAATCTGATT
CATCCGCTGATTCCCATTCGTCCTTGGAACGCCCATCCCCAGTGGAGCGT
GATTTATCTGTGGAATCAGACTCATCTTCAGCCACCAATACCAGCGAATC
TTCAGTCGGAGAAGCTTCAAACCAACTGCAGTCACCGCAAAGCAATAACC
CCTTAAATATGGCTAACTTGTCTGTCTCGACTGAAGATGCTCATTCGCAG
ATCAGATCACTTACCCAGGATGTGATCCAGATGGAAGCAGAGTTGGATCG
CATGAATCGCTACTGCGAGGAAGTTGTGGCACAGATTGACACCTTCGCCA
CGAGAACCTCAACGCCAACAACTCGTAGAATTCGCCGCAGAACGAGTCCA
GTAGAAGTGATAGATCTGTCCCATTTGGACCGTGCACCACCTGTTCGATC
CGCTCGGAATCGTGATCCCGATGCTTTCATCGATCTATGCACCCCCGAAG
GCCCAAGAAGTCGCACAGTGAATCTTCACTCCAACGACTCCCTCACCATT
CTGCCACGTCGGTCAGCCGAAAATGACCCGGTAGTGGATCTCGACGTTGC
GTCGCCACCAAAACGCGTTATTCGCGACATTGATGAGTCCCCAAAAGAGG
AGTTATACAAGTGCCCATTCTGCATGGACAGGGT

BO15425.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10981-PA 960 CG10981-RA 1..815 17..831 3975 99.5 Plus
CG10981-PB 939 CG10981-RB 28..794 65..831 3735 99.4 Plus
CG10981-PB 939 CG10981-RB 1..27 17..43 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RA 1632 CG10981-RA 335..1149 17..831 4015 99.5 Plus
dgrn-RD 1635 CG10981-RD 335..1152 17..831 3975 99.1 Plus
dgrn-RB 1611 CG10981-RB 362..1128 65..831 3775 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825036..5825444 44..452 2045 100 Plus
3R 32079331 3R 5825805..5826093 543..831 1385 98.6 Plus
3R 32079331 3R 5825499..5825588 453..542 450 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:10:26 has no hits.

BO15425.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:31 Download gff for BO15425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PA 1..818 17..834 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:28 Download gff for BO15425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PA 1..818 17..834 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:57:59 Download gff for BO15425.5prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 338..1162 12..834 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:07:35 Download gff for BO15425.5prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 328..1152 12..834 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:07:35 Download gff for BO15425.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5824942..5824975 12..43 94 -> Plus
3R 5825036..5825444 44..452 100 -> Plus
3R 5825499..5825588 453..542 100 -> Plus
3R 5825805..5826096 543..834 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:57:59 Download gff for BO15425.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650664..1650697 12..43 94 -> Plus
arm_3R 1650758..1651166 44..452 100 -> Plus
arm_3R 1651221..1651310 453..542 100 -> Plus
arm_3R 1651527..1651818 543..834 98   Plus

BO15425.complete Sequence

991 bp (991 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633455

> BO15425.complete
GAAGTTATCAGTCGACATGTCAGATTCGACTATTTTCCGTTTTAACTCAT
CCATTCTTGATCAGTCAGCGGACAGCAACGTATCCAGTTCGAGCTCCAAT
TCCAGTGTATCCGACTCTTCTGTGGACTCCCATTCATCCATAGAATCCAA
TTCGGGACACAATACATCCGTGGAATCTCAGTCATCCGCGGAATCTGATT
CATCCGCTGATTCCCATTCGTCCTTGGAACGCCCATCCCCAGTGGAGCGT
GATTTATCTGTGGAATCAGACTCATCTTCAGCCACCAATACCAGCGAATC
TTCAGTCGGAGAAGCTTCAAACCAACTGCAGTCACCGCAAAGCAATAACC
CCTTAAATATGGCTAACTTGTCTGTCTCGACTGAAGATGCTCATTCGCAG
ATCAGATCACTTACCCAGGATGTGATCCAGATGGAAGCAGAGTTGGATCG
CATGAATCGCTACTGCGAGGAAGTTGTGGCACAGATTGACACCTTCGCCA
CGAGAACCTCAACGCCAACAACTCGTAGAATTCGCCGCAGAACGAGTCCA
GTAGAAGTGATAGATCTGTCCCATTTGGACCGTGCACCACCTGTTCGATC
CGCTCGGAATCGTGATCCCGATGCTTTCATCGATCTATGCACCCCCGAAG
GCCCAAGAAGTCGCACAGTGAATCTTCACTCCAACGACTCCCTCACCATT
CTGCCACGTCGGTCAGCCGAAAATGACCCGGTAGTGGATCTCGACGTTGC
GTCGCCACCAAAACGCGTTAATCGCGACATTGATGAGTCCCAAAAAGAGG
AGTTATACAAGTGCCCCATCTGCATGGACAGTGTATCGAAGCGCGAGCCA
GTGTCAACCAAATGTGGACACGTCTTCTGCCGCGAATGCATCGAAACAGC
CATCAGAGCTACGCACAAGTGCCCAATATGCAACAAGAAGCTGACCGCAC
GTCAATTCTTTCGCATTTACTTGGCAAGCTTTCTAGACCAT

BO15425.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RA 960 CG10981-PA 1..957 17..973 4785 100 Plus
dgrn-RB 939 CG10981-PB 28..936 65..973 4545 100 Plus
dgrn-RD 618 CG10981-PD 1..615 359..973 3075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RA 1632 CG10981-RA 335..1291 17..973 4785 100 Plus
dgrn-RD 1635 CG10981-RD 335..1294 17..973 4720 99.7 Plus
dgrn-RB 1611 CG10981-RB 362..1270 65..973 4545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825805..5826235 543..973 2155 100 Plus
3R 32079331 3R 5825036..5825444 44..452 2045 100 Plus
3R 32079331 3R 5825499..5825588 453..542 450 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:37:44 has no hits.

BO15425.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:36 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
CG10981-RA 1..960 17..977 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:46 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
CG10981-RA 338..1310 12..984 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:08:30 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 345..1301 17..975 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:36 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
CG10981-RA 338..1310 12..984 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:22:51 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 335..1291 17..975 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:22:51 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5824949..5824975 17..43 100 -> Plus
3R 5825036..5825444 44..452 100 -> Plus
3R 5825499..5825588 453..542 100 -> Plus
3R 5825805..5826235 543..975 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:08:30 Download gff for BO15425.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650671..1650697 17..43 100 -> Plus
arm_3R 1650758..1651166 44..452 100 -> Plus
arm_3R 1651221..1651310 453..542 100 -> Plus
arm_3R 1651527..1651957 543..975 99   Plus

BO15425.pep Sequence

Translation from 16 to 991

> BO15425.pep
MSDSTIFRFNSSILDQSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNT
SVESQSSAESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEA
SNQLQSPQSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYC
EEVVAQIDTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRD
PDAFIDLCTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKR
VNRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATH
KCPICNKKLTARQFFRIYLASFLDH

BO15425.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-PA 319 CG10981-PA 1..319 1..319 1617 100 Plus
dgrn-PB 312 CG10981-PB 1..312 1..319 1566 97.8 Plus
dgrn-PD 205 CG10981-PD 1..205 115..319 1070 100 Plus
CG43058-PA 100 CG43058-PA 10..100 194..319 214 35.7 Plus
elfless-PC 229 CG15150-PC 42..229 156..319 183 30.7 Plus