Clone Sequence Records
BO15426.3prime Sequence
901 bp (785 high quality bases) assembled on 2006-05-29
> BO15426.3prime
ATGGTCTAGAAAGCTTGCATCTTGTGATGCTGACGTAACCTCAGTATGTG
AATCTTCATTGATAGTTAGCTTATCATAGAGTTCGGTGAGTAAATCCTTT
TTCTGAGCCATAGGTAAAGCCCGTTGATAGCGTTCCTCCCAGGCTTCTGG
ATGAGATTTGGCCAAGACCTTTAGGGTAACGGCTACAGCTGCCCTCATAT
CCTTTTCGGGACTTTCGTGATAGAGCAACAGCAGATCCATGGCGCGTTTA
ACAATAGCATCCCACACCTCCTTTTCATAATTCTCTTCAGTATCCGTCTC
GGCGAACTTGGGCTTCAATTTACCCATCGCCAAAGCAGCCAGGATACGAA
TGCCAGCCGAAGGATCATCCATGCGCTGCATGGTGGCATAAGCTAGTGGC
TTCAAATCTTCCACAGACATTTCCCGGAAATATACAACCGCCTTGATCGC
ATAATGACGTGTGGTGACATTGCGATCTTCGAGCAGGCTAGGCATATATT
TGGCCAGAGAGGGTAGTACTTCCACAGATTCCGACTCGGCTCCCTGAGCC
AAAGCACACAGAGTAGCCATGGCCAGGGATCTCATGGCCTCGGCATTGGA
TCCAGCCTTCCAGGTCAGATAGGGTTCCACAATCTGAGATACGAATTCAC
TTAACATCTGGGTGCTGGACTCACGTTCTACATTCATCGTTTTCGACCAA
AATAGAGTTGCTAACGAGAGACTGCTAAAGATTTTAACTTGAGCACTATC
GCAGCAATGCTGAAAGACGATCTTAACTTTCTCGATAAGATCGTGCACAT
AGGTGGCTCGAATGTGGCACATATTTATCAATCCATTCAACAGCATCACT
GGTTCAGCATTATCCTCTAAGGCCGCATCCAGATTTTATACATCCTGCAA
G
BO15426.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-PA | 2538 | CG31320-RA | 1653..2535 | 901..19 | 4365 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-RA | 3431 | CG31320-RA | 2302..3184 | 901..19 | 4385 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14358603..14359485 | 19..901 | 4385 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:07:10 has no hits.
BO15426.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:32 Download gff for
BO15426.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-PA | 1653..2538 | 18..901 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:29 Download gff for
BO15426.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-PA | 1653..2538 | 18..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:29:29 Download gff for
BO15426.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 2302..3184 | 19..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:36:42 Download gff for
BO15426.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 2302..3184 | 19..901 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:36:42 Download gff for
BO15426.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14358603..14359485 | 19..901 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:29:29 Download gff for
BO15426.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10184325..10185207 | 19..901 | 99 | | Plus |
BO15426.5prime Sequence
914 bp (836 high quality bases) assembled on 2006-05-29
> BO15426.5prime
GAAGTTATCAGTCGACATGGGCTTCGATATTGATAGCCAGAAGATTTGCT
CGGATCTGGAGAGCTCCGATCGACGTCTGAAGACCACAGTTCTGGATGAA
CTGCTCGATAAGTGCAAAGAAGCAACAAATTCCGAGAGTGCTGACAAAAT
AGCCGATGTTTTCGATAAACTGTATCTGCATCTACTGAAATGCTACGAAG
ATAGATTCGAAAGCGTTCGCTCTAAAGCCATTCAAGTGGTAAGCGCTTTT
TTGTCAAGTCTTCCGCCCACGGATTTCCACCTGATGAATGTGGTTTCAAC
TTTGGCGGAGCGGATGGGAAAGGCCGAAACCGTGGAGCCCAGCGAGGAAA
TCCGTCTCCTCTACATTGCGCAACTGAATTTGATGATTTGCCTGTATGAG
AAAATGGAAAATGTGGGCGTCTTCAGGGAGTGCTATCCCTTGGTGGTGAA
GATTCTGATTAAGTCTATCAAGGATGACTATCCGGTGGTGCAGCGCGAAG
GATGCTCCGCTGTGGTTACTCTCTCTCGTTTGGCTGATACCCAGGAGTTT
CGTCCCTTTACAGAATCCATTCTGCTACCTCTTTACACAATGTTGAATCA
CAAGCATGCACAGGCCAGGATATCGGCCATTCAAGCCATCGCCAGGCTGA
GTCTACACATGGACGCCAGTGGCGATGCAATGAGAAGGCTCTTNCATGAG
GTGTCGCCCCTACTTATGGACACCATGCCATTGGTTCGCCGTGAAGTCGG
TCAGATGGGCATTCTTATGCTAATGGAACTATTGGATCGCTATTCCTTCT
TTGAGAGAATTCTACCGCTGGTTCTTTGTTGCCTAAAAGACGAATCTCCG
GAGGTTCTGAACCACATATACCCGCAATGGCTCAAGTGTGGCATACAATA
TTTCAATGAAAACG
BO15426.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-PA | 2538 | CG31320-RA | 1..898 | 17..914 | 4446 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:35:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-RA | 3431 | CG31320-RA | 650..1547 | 17..914 | 4464 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14360240..14361137 | 914..17 | 4464 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:35:46 has no hits.
BO15426.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:33 Download gff for
BO15426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-PA | 1..898 | 17..914 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:30 Download gff for
BO15426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-PA | 1..898 | 17..914 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:01:36 Download gff for
BO15426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 650..1547 | 17..914 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:09:42 Download gff for
BO15426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 650..1547 | 17..914 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:09:42 Download gff for
BO15426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14360240..14361135 | 19..914 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:01:36 Download gff for
BO15426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10185962..10186857 | 19..914 | 99 | -> | Minus |
BO15426.complete Sequence
2569 bp assembled on 2008-08-14
GenBank Submission: FJ633456
> BO15426.complete
GAAGTTATCAGTCGACATGGGCTTCGATATTGATAGCCAGAAGATTTGCT
CGGATCTGGAGAGCTCCGATCGACGTCTGAAGACCACAGTTCTGGATGAA
CTGCTCGATAAGTGCAAAGAAGCAACAAATTCCGAGAGTGCTGACAAAAT
AGCCGATGTTTTCGATAAACTGTATCTGCATCTACTGAAATGCTACGAAG
ATAGATTCGAAAGCGTTCGCTCTAAAGCCATTCAAGTGGTAAGCGCTTTT
TTGTCAAGTCTTCCGCCCACGGATTTCCACCTGATGAATGTGGTTTCAAC
TTTGGCGGAGCGGATGGGAAAGGCCGAAACCGTGGAGCCCAGCGAGGAAA
TCCGTCTCCTCTACATTGCGCAACTGAATTTGATGATTTGCCTGTATGAG
AAAATGGAAAATGTGGGCGTCTTCAGGGAGTGCTATCCCTTGGTGGTGAA
GATTCTGATTAAGTCTATCAAGGATGACTATCCGGTGGTGCAGCGCGAAG
GATGCTCCGCTGTGGTTACTCTCTCTCGTTTGGCTGATACCCAGGAGTTT
CGTCCCTTTACAGAATCCATTCTGCTACCTCTTTACACAATGTTGAATCA
CAAGCATGCACAGGCCAGGATATCGGCCATTCAAGCCATCGCCAGGCTGA
GTCTACACATGGACGCCAGTGGCGATGCAATGAGAAGGCTCTTCAATGAG
GTGTCGCCCCTACTTATGGACACCATGCCATTGGTTCGCCGTGAAGTCGG
TCAGATGGGCATTCTTATGCTAATGGAACTATTGGATCGCTATTCCTTCT
TTGAGAGAATTCTACCGCTGGTTCTTTGTTGCCTAAAAGACGAATCTCCG
GAGGTTCTGAACCACATATACCCGCAATGGCTCAAGTGTGGCATACAATA
TTTCAATGAAAACGAAGCCGAGTTGTCACAACAGGAAATAAGCGATTTGC
CCGTTGAGAATTACCCGAAAGATGTCAAGCGACCTACGATAGGATGTCGT
GGATTGGTGCAACGATCTTTGCGACTCTTGCAACTTATTACCCGGGAAAC
AAGCGACTGGAAGGATAATGTACGCCTCCACGCCCTGAAGCTACTCTATC
AATTTGTTTTGCACGCCGAGGCTGCCATGACTGCCAAGTTCTTTGAGATC
TACGGGGATTTGGCCCATGCCTGTATCGATCATGTGGCAGAAGTCAATGC
GGAAGCCGCCAAGGTGGCGGATTTGATGGGTCGTCTGTTGTCCTACGATG
CCTGGATAGATCACGGCTTCGATGGCCTGGAACGAAATGCCCGTGAGTCT
TATATGAGATGTTTCTACCACATGTTCACCGCCTCCCTCGGTGGCACCTA
TGAGCAGTTAATGCGCTTGGCCAAGCTTCTTCGCTGCACCGATTACTCGC
ATACTCTGAAGCCAGGTTTCCAGCATTACATACTCAAACTCTTGAATACC
ATTGTGGATAAAACGCTGAAGATCAATGCGGGGCAAAACGAGCTGGAAGA
TCTCTACGAATCGGTATATGTATGTGCCATTAAAGTAATGGCACTTTCAA
GTTCACTCGAAAATGTCGGAGACGAAGATGTTAATTTCGGTCAAACGCTG
ATCGAAAAAATGGTCAAACTTCTCAACACTTCGGTTCCTAAAATTCACGA
ACGTTGGTTTCATTTGGCCTTGCAGGATGTAATAAATCTGGATGCGGCCT
TAGAGGATAATGCTGAACCAGTGATGCTGTTGAATGGATTGATAAATATG
TGCCACATTCGAGCCACCTATGTGCACGATCTTATCGAGAAAGTTAAGAT
CGTCTTTCAGCATTGCTGCGATAGTGCTCAAGTTAAAATCTTTAGCAGTC
TCTCGTTAGCAACTCTATTTTGGTCGAAAACGATGAATGTAGAACGTGAG
TCCAGCACCCAGATGTTAAGTGAATTCGTATCTCAGATTGTGGAACCCTA
TCTGACCTGGAAGGCTGGATCCAATGCCGAGGCCATGAGATCCCTGGCCA
TGGCTACTCTGTGTGCTTTGGCTCAGGGAGCCGAGTCGGAATCTGTGGAA
GTACTACCCTCTCTGGCCAAATATATGCCTAGCCTGCTCGAAGATCGCAA
TGTCACCACACGTCATTATGCGATCAAGGCGGTTGTATATTTCCGGGAAA
TGTCTGTGGAAGATTTGAAGCCACTAGCTTATGCCACCATGCAGCGCATG
GATGATCCTTCGGCTGGCATTCGTATCCTGGCTGCTTTGGCGATGGGTAA
ATTGAAGCCCAAGTTCGCCGAGACGGATACTGAAGAGAATTATGAAAAGG
AGGTGTGGGATGCTATTGTTAAACGCGCCATGGATCTGCTGTTGCTCTAT
CACGAAAGTCCCGAAAAGGATATGAGGGCAGCTGTAGCCGTTACCCTAAA
GGTCTTGGCCAAATCTCATCCAGAAGCCTGGGAGGAACGCTATCAACGGG
CTTTACCTATGGCTCAGAAAAAGGATTTACTCACCGAACTCTATGATAAG
CTAACTATCAATGAAGATTCACATACTGAGGTTACGTCAGCATCACAAGA
TGCAAGCTTTCTAGACCAT
BO15426.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:16:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-RA | 2538 | CG31320-PA | 1..2535 | 17..2551 | 12675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-RA | 3431 | CG31320-RA | 650..3184 | 17..2551 | 12675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14358603..14361137 | 2551..17 | 12675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:16:48 has no hits.
BO15426.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:42:13 Download gff for
BO15426.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 603..3137 | 17..2551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:30 Download gff for
BO15426.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 650..3184 | 17..2553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:58:24 Download gff for
BO15426.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 603..3137 | 17..2553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:02 Download gff for
BO15426.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 650..3184 | 17..2553 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:04:02 Download gff for
BO15426.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14358601..14361137 | 17..2553 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:30 Download gff for
BO15426.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10184323..10186859 | 17..2553 | 99 | | Minus |
BO15426.pep Sequence
Translation from 16 to 2569
> BO15426.pep
MGFDIDSQKICSDLESSDRRLKTTVLDELLDKCKEATNSESADKIADVFD
KLYLHLLKCYEDRFESVRSKAIQVVSAFLSSLPPTDFHLMNVVSTLAERM
GKAETVEPSEEIRLLYIAQLNLMICLYEKMENVGVFRECYPLVVKILIKS
IKDDYPVVQREGCSAVVTLSRLADTQEFRPFTESILLPLYTMLNHKHAQA
RISAIQAIARLSLHMDASGDAMRRLFNEVSPLLMDTMPLVRREVGQMGIL
MLMELLDRYSFFERILPLVLCCLKDESPEVLNHIYPQWLKCGIQYFNENE
AELSQQEISDLPVENYPKDVKRPTIGCRGLVQRSLRLLQLITRETSDWKD
NVRLHALKLLYQFVLHAEAAMTAKFFEIYGDLAHACIDHVAEVNAEAAKV
ADLMGRLLSYDAWIDHGFDGLERNARESYMRCFYHMFTASLGGTYEQLMR
LAKLLRCTDYSHTLKPGFQHYILKLLNTIVDKTLKINAGQNELEDLYESV
YVCAIKVMALSSSLENVGDEDVNFGQTLIEKMVKLLNTSVPKIHERWFHL
ALQDVINLDAALEDNAEPVMLLNGLINMCHIRATYVHDLIEKVKIVFQHC
CDSAQVKIFSSLSLATLFWSKTMNVERESSTQMLSEFVSQIVEPYLTWKA
GSNAEAMRSLAMATLCALAQGAESESVEVLPSLAKYMPSLLEDRNVTTRH
YAIKAVVYFREMSVEDLKPLAYATMQRMDDPSAGIRILAALAMGKLKPKF
AETDTEENYEKEVWDAIVKRAMDLLLLYHESPEKDMRAAVAVTLKVLAKS
HPEAWEERYQRALPMAQKKDLLTELYDKLTINEDSHTEVTSASQDASFLD
H
BO15426.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-PA | 845 | CG31320-PA | 1..845 | 1..845 | 4319 | 100 | Plus |
