Clone BO15428 Report

Search the DGRC for BO15428

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG32599-RA
Protein status:BO15428.pep: validated full length
Sequenced Size:985

Clone Sequence Records

BO15428.3prime Sequence

802 bp (712 high quality bases) assembled on 2006-05-29

> BO15428.3prime
ATGGTCTAGAAAGCTTGCCGGAATCGAGCTGACACGCACCACCTGCGCCA
GTGGCAACGTGTCCAGGCGCTGTAGTCGCTGTCGTTTCTCGCCGGGATTG
AGCTTGGCCGCAGCACTGGCCTGGCCACCTGGACTGGCGACCGTACTGCG
ACCTGATCTCGTACCCGGACCAGATGCGCCAGCTGAATCCGTGCTATCGC
TCTGCGCCTCCACCAGTTTGACATGGGCGATGGTCTGACCGAAGAGCTTC
TGCCGGAAACTGGGCCTCTTGGGCGCTCCACGATGCACGCCAATGTCCGG
CGTATGCGAGCGCTGATGGCTACGTTGATGATGATCATCTCGCTCCACGG
AGCGCTCCTTGTGACGATGGCGTCGCTGCTTCTTGCGGTGCTCACCGCCA
CCGTTGGGCAGCAGCTCGTTGACGTAGTGCAGCGAACTGGAGGCACTGCC
CGTGGAATCGGTGCCGGAGTGACCATGATGCGATTGCGCCTTCTTCGCGT
GGCGCGCATGCTTCTCCTCCAGCTCGATTTTGTTCTTTAGCGTCACCTCC
TCGATGTGCCGCTCAAACATGGCACGCCTGTGCTTGTCCCTCTTGGCCAG
GACGACCACCCAGGCGCCGTAGGAGAGCATGATGCCCGCCGGTACCAGGA
CGCCAGCCAGCGAGTTCTCCGACTTCCGGACGCAGGCATGGTAGACAGCC
AGGAAGAGCACCAGAAAACAGACGATCACAGCCACCAGACGTCCATTGGC
TTTTCGCTCCTCGCGCGACTTGAGGTCGAGGATCTCGTTGAGATTCTCCT
GA

BO15428.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-PA 954 CG32599-RA 168..951 802..19 3870 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:28:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-RA 1233 CG32599-RA 311..1094 802..19 3890 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14245830..14246375 564..19 2730 100 Minus
X 23542271 X 14245618..14245765 711..564 710 98.6 Minus
X 23542271 X 14245248..14245299 762..711 260 100 Minus
X 23542271 X 14243996..14244036 802..762 205 100 Minus
Blast to na_te.dros performed 2015-02-02 18:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 933..1027 341..247 113 62.9 Minus

BO15428.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:37 Download gff for BO15428.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-PA 169..954 16..801 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:34 Download gff for BO15428.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-PA 169..954 16..801 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:48:17 Download gff for BO15428.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 312..1094 19..801 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:01:46 Download gff for BO15428.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 312..1094 19..801 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:01:46 Download gff for BO15428.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14243997..14244035 763..801 100 -> Minus
X 14245248..14245299 711..762 100 -> Minus
X 14245619..14245764 565..710 98 -> Minus
X 14245830..14246375 19..564 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:48:17 Download gff for BO15428.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14138030..14138068 763..801 100 -> Minus
arm_X 14139281..14139332 711..762 100 -> Minus
arm_X 14139652..14139797 565..710 98 -> Minus
arm_X 14139863..14140408 19..564 100   Minus

BO15428.5prime Sequence

821 bp (779 high quality bases) assembled on 2006-05-29

> BO15428.5prime
GAAGTTATCAGTCGACATGTCCGCGACCGCCTCAAATCGCCAGCCGGTGC
CAAAATTTCCGGCCGCCATGCCGCGTGGAACGGGCACAGTGTGCTCCAAT
CCGGCGGTGCCCAAGTCGCCGGATGCCCTCACCTCCCTGGTGGCCCGGAA
GAGCATTACGTCCATGTCGGAGGAGGAGATCATTCAGGAGAATCTCAACG
AGATCCTCGACCTCAAGTCGCGCGAGGAGCGAAAAGCCAATGGACGTCTG
GTGGCTGTGATCGTCTGTTTTCTGGTGCTCTTCCTGGCTGTCTACCATGC
CTGCGTCCGGAAGTCGGAGAACTCGCTGGCTGGCGTCCTGGTACCGGCGG
GCATCATGCTCTCCTACGGCGCCTGGGTGGTCGTCCTGGCCAAGAGGGAC
AAGCACAGGCGTGCCATGTTTGAGCGGCACATCGAGGAGGTGACGCTAAA
GAACAAAATCGAGCTGGAGGAGAAGCATGCGCGCCACGCGAAGAAGGCGC
AATCGCATCATGGTCACTCCGGCACCGATTCCACGGGCAGTGCCTCCAGT
TCGCTGCACTACGTCAACGAGCTGCTGCCCAACGGTGGCGGTGAGCACCG
CAAGAAGCAGCGACGCCATCGTCACAAGGAGCGCTCCGTGGAGCGAGATG
ATCATCATCAACGTAGCCATCAGCGCTCGCATACGCCGGACATTGGCGTG
CATCGTGGAGCGCCCAAGAGGCCCAGTTTCCGGCAGAAGCTCTTCGGTCA
GACCATCGCCCATGTCAAACTGGTGGAGGCGCAGAGCGATAGCACGGATT
CAGCTGGCGCATCTGGTCCGG

BO15428.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-PA 954 CG32599-RA 1..805 17..821 3975 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-RA 1233 CG32599-RA 143..948 16..821 4000 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14245830..14246229 422..821 2000 100 Plus
X 23542271 X 14243828..14244036 16..224 1045 100 Plus
X 23542271 X 14245618..14245765 275..422 710 98.6 Plus
X 23542271 X 14245248..14245299 224..275 260 100 Plus
Blast to na_te.dros performed 2015-02-12 00:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 933..1027 645..739 113 62.9 Plus

BO15428.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:38 Download gff for BO15428.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-PA 1..805 17..821 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:36 Download gff for BO15428.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-PA 1..805 17..821 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:33:52 Download gff for BO15428.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 143..948 16..821 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:10:48 Download gff for BO15428.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 143..948 16..821 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:10:48 Download gff for BO15428.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14243828..14244035 16..223 100 -> Plus
X 14245248..14245299 224..275 100 -> Plus
X 14245619..14245764 276..421 98 -> Plus
X 14245830..14246229 422..821 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:33:52 Download gff for BO15428.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14137861..14138068 16..223 100 -> Plus
arm_X 14139281..14139332 224..275 100 -> Plus
arm_X 14139652..14139797 276..421 98 -> Plus
arm_X 14139863..14140262 422..821 100   Plus

BO15428.complete Sequence

985 bp (985 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633458

> BO15428.complete
GAAGTTATCAGTCGACATGTCCGCGACCGCCTCAAATCGCCAGCCGGTGC
CAAAATTTCCGGCCGCCATGCCGCGTGGAACGGGCACAGTGTGCTCCAAT
CCGGCGGTGCCCAAGTCGCCGGATGCCCTCACCTCCCTGGTGGCCCGGAA
GAGCATTACGTCCATGTCGGAGGAGGAGATCATTCAGGAGAATCTCAACG
AGATCCTCGACCTCAAGTCGCGCGAGGAGCGAAAAGCCAATGGACGTCTG
GTGGCTGTGATCGTCTGTTTTCTGGTGCTCTTCCTGGCTGTCTACCATGC
CTGCGTCCGGAAGTCGGAGAACTCGCTGGCTGGCGTCCTGGTACCGGCGG
GCATCATGCTCTCCTACGGCGCCTGGGTGGTCGTCCTGGCCAAGAGGGAC
AAGCACAGGCGTGCCATGTTTGAGCGGCACATCGAGGAGGTGACGCTAAA
GAACAAAATCGAGCTGGAGGAGAAGCATGCGCGCCACGCGAAGAAGGCGC
AATCGCATCATGGTCACTCCGGCACCGATTCCACGGGCAGTGCCTCCAGT
TCGCTGCACTACGTCAACGAGCTGCTGCCCAACGGTGGCGGTGAGCACCG
CAAGAAGCAGCGACGCCATCGTCACAAGGAGCGCTCCGTGGAGCGAGATG
ATCATCATCAACGTAGCCATCAGCGCTCGCATACGCCGGACATTGGCGTG
CATCGTGGAGCGCCCAAGAGGCCCAGTTTCCGGCAGAAGCTCTTCGGTCA
GACCATCGCCCATGTCAAACTGGTGGAGGCGCAGAGCGATAGCACGGATT
CAGCTGGCGCATCTGGTCCGGGTACGAGATCAGGTCGCAGTACGGTCGCC
AGTCCAGGTGGCCAGGCCAGTGCTGCGGCCAAGCTCAATCCCGGCGAGAA
ACGACAGCGACTACAGCGCCTGGACACGTTGCCACTGGCGCAGGTGGTGC
GTGTCAGCTCGATTCCGGCAAGCTTTCTAGACCAT

BO15428.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:12:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-RA 954 CG32599-PA 1..951 17..967 4725 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-RA 1233 CG32599-RA 143..1094 16..967 4730 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14245830..14246375 422..967 2730 100 Plus
X 23542271 X 14243828..14244036 16..224 1045 100 Plus
X 23542271 X 14245618..14245765 275..422 710 98.6 Plus
X 23542271 X 14245248..14245299 224..275 260 100 Plus
Blast to na_te.dros performed 2014-11-27 08:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 933..1027 645..739 113 62.9 Plus

BO15428.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:37 Download gff for BO15428.complete
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 1..954 17..970 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:48 Download gff for BO15428.complete
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 1..954 17..970 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:08:41 Download gff for BO15428.complete
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 144..1094 17..969 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:13:03 Download gff for BO15428.complete
Subject Subject Range Query Range Percent Splice Strand
CG32599-RA 144..1094 17..969 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:13:03 Download gff for BO15428.complete
Subject Subject Range Query Range Percent Splice Strand
X 14243829..14244035 17..223 100 -> Plus
X 14245248..14245299 224..275 100 -> Plus
X 14245619..14245764 276..421 98 -> Plus
X 14245830..14246375 422..969 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:08:41 Download gff for BO15428.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14137862..14138068 17..223 100 -> Plus
arm_X 14139281..14139332 224..275 100 -> Plus
arm_X 14139652..14139797 276..421 98 -> Plus
arm_X 14139863..14140408 422..969 99   Plus

BO15428.pep Sequence

Translation from 16 to 985

> BO15428.pep
MSATASNRQPVPKFPAAMPRGTGTVCSNPAVPKSPDALTSLVARKSITSM
SEEEIIQENLNEILDLKSREERKANGRLVAVIVCFLVLFLAVYHACVRKS
ENSLAGVLVPAGIMLSYGAWVVVLAKRDKHRRAMFERHIEEVTLKNKIEL
EEKHARHAKKAQSHHGHSGTDSTGSASSSLHYVNELLPNGGGEHRKKQRR
HRHKERSVERDDHHQRSHQRSHTPDIGVHRGAPKRPSFRQKLFGQTIAHV
KLVEAQSDSTDSAGASGPGTRSGRSTVASPGGQASAAAKLNPGEKRQRLQ
RLDTLPLAQVVRVSSIPASFLDH

BO15428.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32599-PA 317 CG32599-PA 1..317 1..317 1620 100 Plus