Clone BO15430 Report

Search the DGRC for BO15430

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:30
Vector:pDNR-Dual
Associated Gene/Transcriptfau-RA
Protein status:BO15430.pep: validated full length
Sequenced Size:1891

Clone Sequence Records

BO15430.3prime Sequence

756 bp (733 high quality bases) assembled on 2006-05-29

> BO15430.3prime
ATGGTCTAGAAAGCTTGCTTCCTCCTCCTCTTCCTCGTCCTCCTCCTCCT
CCGCATCGAGATCCTCCTCGTAGCTATTACCACCAGTGGGGGTAACATTA
GAGCCGAGCTCGATGATCGGTTCCTGTTCCTCAACGGGCGTGACGGGCTC
TTCGACCACAGGCTCGCTGGTCTCGTTCTCGTTCTTCTGGATGGCCTGCA
GTTCCTGGGCGGCAAGCTCGGATTCCTGGCGGGCGATCTCGGCCAGCTCG
GCGGCCTGGCGAGCAAGTTCTCCCTCACTCTCCTTCTCGATCTCCGCCAG
GCGCTCCAGCTCCTGCTCACGGACACGCTGCTCCTCCTCCAGGCGAGCCT
CTTCAGCGACACGAGCCTCTTCGGCGGCCTTTTGGGCAGCTTCTTCGGCG
GCACGAGCCTCCTCTACAGCCTTCAGTGCGGCTTCTTCGGCGGCCTTTTG
GGCAGCTTCTTCAGCCAGACGAGCCTCTTCGGCTGCCTTTAAAGCGGCTT
CTTCGGCAGCCTTTTGGGCAGCTTCCTCGGCGGCCTTTTGGGCGGCTGCC
TCCTCTGCTAGGCGAGCTTCCTCAGCAGCTTTTTGGGCAGCTTCCTCGGC
GACCTTTTGGGCGGCAGCCTCCTCCGCTAGACGCGCTTCTTCGGCAGCTT
TCTGGGCAGCATCTTCAGCGGCTTTTAGGGCTTTTGCTTCTTCGGCTGCT
TTTTGGGCGGCAGCTTCAGCCAGGAGAGCCTCTTCGGCAGCGATTTTGGG
GGCCTC

BO15430.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG6544-PA 1860 fau-RA 1120..1857 756..19 3640 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RH 2199 CG45076-RH 1243..1980 756..19 3660 99.7 Minus
CG45076-RA 2034 CG45076-RA 1243..1980 756..19 3660 99.7 Minus
CG45076-RH 2199 CG45076-RH 1318..1565 612..368 465 80.7 Minus
CG45076-RH 2199 CG45076-RH 1387..1631 681..434 465 80.7 Minus
CG45076-RA 2034 CG45076-RA 1318..1565 612..368 465 80.7 Minus
CG45076-RA 2034 CG45076-RA 1387..1631 681..434 465 80.7 Minus
CG45076-RH 2199 CG45076-RH 1225..1479 612..364 240 74.4 Minus
CG45076-RA 2034 CG45076-RA 1225..1479 612..364 240 74.4 Minus
CG45076-RH 2199 CG45076-RH 1225..1313 519..431 205 82 Minus
CG45076-RA 2034 CG45076-RA 1225..1313 519..431 205 82 Minus
CG45076-RH 2199 CG45076-RH 1453..1635 711..520 185 74.5 Minus
CG45076-RA 2034 CG45076-RA 1453..1635 711..520 185 74.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10768220..10768957 19..756 3660 99.7 Plus
3R 32079331 3R 10768635..10768882 368..612 395 78.2 Plus
3R 32079331 3R 10768569..10768813 434..681 395 78.2 Plus
3R 32079331 3R 10768887..10768975 431..519 205 82 Plus
Blast to na_te.dros performed on 2015-02-10 18:24:41 has no hits.

BO15430.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:41 Download gff for BO15430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1120..1860 18..756 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:40 Download gff for BO15430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1120..1860 18..756 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:47:44 Download gff for BO15430.3prime
Subject Subject Range Query Range Percent Splice Strand
fau-RA 1243..1986 11..756 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:47:35 Download gff for BO15430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG45076-RA 1243..1986 11..756 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:47:35 Download gff for BO15430.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10768214..10768957 11..756 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:47:44 Download gff for BO15430.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6593936..6594679 11..756 99   Plus

BO15430.5prime Sequence

830 bp (781 high quality bases) assembled on 2006-05-29

> BO15430.5prime
GAAGTTATCAGTCGACATGGTTTACGAAAGTGGATTTACGACCCGCAGAA
CCTACTCCTCGAGGCCGGTGACAACTTCCTACGCAGTTACGTACCCCTCG
GTCGAGAAAGTAACTCGTGTGTACAAGTCGAGTTACCCCATCTACTCGAG
CTACTCGGTGCCACGCCGCGTCTACGGCGCAACCCGGGTGGTGACCTCGC
CCATCCGCGTGGTAACCTCGCCTGCCCGCGTGGTGTCCCGCGTCATACAC
TCACCATCGCCTGTTCGCGTTGTCCGCACGACGACCCGAGTGATTTCATC
GCCGGAGCGCACCACCTACTCCTACACCACGCCATCGACCTACTACAGCC
CCTCCTACTTGCCATCGACCTACACTTCGACCTACATCCCGACATCGTAC
ACCACGTACACGCCGTCCTACGCCTACAGCCCGACCACGGTCACCCGGGT
GTATGCCCCACGCAGTTCGCTGTCGCCGCTGAGGATCACCCCCTCGCCGG
TGAGGGTCATCACCAGCCCGGTTCGCTCTGTGCCCTCCTATCTGAAGAGG
CTGCCGCCTGGTTACGGTGCCCGCGCCCTGACCAATTACCTCAATACCGA
ACCCTTTACCACCTTCTCCGAGGAAACAAGCCGGATTCGCAACCGCGCGC
AATCTCTGATTCGTGACTTGCACACTCCCGTGGTGCGCCGTGCACGTAGC
TGCACTCCCTTTCCCGTCACTGGTTACACCTATGAGCCGGCCTCGCAACT
GGCCCTAGATGCCTATGTGGCCCGTGTCACAAATCCTGTCCGTCATATTG
CCAAGGAAGTTCACAATATTTCGCACTACC

BO15430.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG6544-PA 1860 fau-RA 1..814 17..830 4070 100 Plus
CG6544-PD 297 fau-RD 1..104 17..120 520 100 Plus
CG6544-PC 396 fau-RC 1..75 17..91 375 100 Plus
CG6544-PB 492 fau-RB 1..75 17..91 375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RI 2109 CG45076-RI 122..937 15..830 4080 100 Plus
CG45076-RH 2199 CG45076-RH 122..937 15..830 4080 100 Plus
CG45076-RE 1215 CG45076-RE 122..937 15..830 4080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10772113..10772604 610..119 2460 100 Minus
3R 32079331 3R 10771860..10771972 723..611 565 100 Minus
3R 32079331 3R 10771361..10771468 830..723 540 100 Minus
3R 32079331 3R 10777177..10777253 91..15 385 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:55:21 has no hits.

BO15430.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:42 Download gff for BO15430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1..814 17..830 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:42 Download gff for BO15430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1..814 17..830 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:12:11 Download gff for BO15430.5prime
Subject Subject Range Query Range Percent Splice Strand
fau-RA 116..937 7..830 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:28:09 Download gff for BO15430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG45076-RE 116..937 7..830 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:28:09 Download gff for BO15430.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10771361..10771467 724..830 100 <- Minus
3R 10771860..10771972 611..723 100 <- Minus
3R 10772113..10772604 119..610 100 <- Minus
3R 10773135..10773161 92..118 100 <- Minus
3R 10777177..10777259 7..91 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:12:11 Download gff for BO15430.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6597083..6597189 724..830 100 <- Minus
arm_3R 6597582..6597694 611..723 100 <- Minus
arm_3R 6597835..6598326 119..610 100 <- Minus
arm_3R 6598857..6598883 92..118 100 <- Minus
arm_3R 6602899..6602981 7..91 96   Minus

BO15430.complete Sequence

1891 bp assembled on 2006-10-11

GenBank Submission: FJ633459

> BO15430.complete
GAAGTTATCAGTCGACATGGTTTACGAAAGTGGATTTACGACCCGCAGAA
CCTACTCCTCGAGGCCGGTGACAACTTCCTACGCAGTTACGTACCCCTCG
GTCGAGAAAGTAACTCGTGTGTACAAGTCGAGTTACCCCATCTACTCGAG
CTACTCGGTGCCACGCCGCGTCTACGGCGCAACCCGGGTGGTGACCTCGC
CCATCCGCGTGGTAACCTCGCCTGCCCGCGTGGTGTCCCGCGTCATACAC
TCACCATCGCCTGTTCGCGTTGTCCGCACGACGACCCGAGTGATTTCATC
GCCGGAGCGCACCACCTACTCCTACACCACGCCATCGACCTACTACAGCC
CCTCCTACTTGCCATCGACCTACACTTCGACCTACATCCCGACATCGTAC
ACCACGTACACGCCGTCCTACGCCTACAGCCCGACCACGGTCACCCGGGT
GTATGCCCCACGCAGTTCGCTGTCGCCGCTGAGGATCACCCCCTCGCCGG
TGAGGGTCATCACCAGCCCGGTTCGCTCTGTGCCCTCCTATCTGAAGAGG
CTGCCGCCTGGTTACGGTGCCCGCGCCCTGACCAATTACCTCAATACCGA
ACCCTTTACCACCTTCTCCGAGGAAACAAGCCGGATTCGCAACCGCGCGC
AATCTCTGATTCGTGACTTGCACACTCCCGTGGTGCGCCGTGCACGTAGC
TGCACTCCCTTTCCCGTCACTGGTTACACCTATGAGCCGGCCTCGCAACT
GGCCCTAGATGCCTATGTGGCCCGTGTCACAAATCCTGTCCGTCATATTG
CCAAGGAAGTTCACAATATTTCGCACTACCCCAGGCCAGCAGTGAAATAT
GTTGATGCCGAGTTGGATCCTAACCGTCCATCTAGAAAATTTTCTGCCCC
TAGGCCCCTGGAGGATCCCCTCGATGTGGAGGCCAAGGAGAAACAGCGTC
TGCGCCAGGAGCGTCTTCTAACCGTTAACGAAGAGGCTCTCGACGAGGTG
GACTTGGAAAAGAAGCGTGCCCAGAAAGCCGATGAAGCCAAGCGTAGGGA
AGAGAGGGCTCTCAAGGAGGAGAGGGATCGCCTGACGGCTGAGGCCGAAA
AGCAGGCTGCTGCTAAGGCCAAAAAGGCTGCCGAGGAGGCCGCCAAAATC
GCTGCCGAAGAGGCTCTCCTGGCTGAAGCTGCCGCCCAAAAAGCAGCCGA
AGAAGCTAAAGCCCTAAAAGCCGCTGAAGATGCTGCCCAGAAAGCTGCCG
AAGAAGCGCGTCTAGCGGAGGAGGCTGCCGCCCAAAAGGTCGCCGAGGAA
GCTGCCCAAAAAGCTGCTGAGGAAGCTCGCCTAGCAGAGGAGGCAGCCGC
CCAAAAGGCCGCCGAGGAAGCTGCCCAAAAGGCTGCCGAAGAAGCCGCTT
TAAAGGCAGCCGAAGAGGCTCGTCTGGCTGAAGAAGCTGCCCAAAAGGCC
GCCGAAGAAGCCGCACTGAAGGCTGTAGAGGAGGCTCGTGCCGCCGAAGA
AGCTGCCCAAAAGGCCGCCGAAGAGGCTCGTGTCGCTGAAGAGGCTCGCC
TGGAGGAGGAGCAGCGTGTCCGTGAGCAGGAGCTGGAGCGCCTGGCGGAG
ATCGAGAAGGAGAGTGAGGGAGAACTTGCTCGCCAGGCCGCCGAGCTGGC
CGAGATCGCCCGCCAGGAATCCGAGCTTGCCGCCCAGGAACTGCAGGCCA
TCCAGAAGAACGAGAACGAGACCAGCGAGCCTGTGGTCGAAGAGCCCGTC
ACGCCCGTTGAGGAACAGGAACCGATCATCGAGCTCGGCTCTAATGTTAC
CCCCACTGGTGGTAATAGCTACGAGGAGGATCTCGATGCGGAGGAGGAGG
AGGACGAGGAAGAGGAGGAGGAAGCAAGCTTTCTAGACCAT

BO15430.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RH 1860 CG45076-PH 1..1857 17..1873 9285 100 Plus
CG45076-RA 1860 CG45076-PA 1..1857 17..1873 9285 100 Plus
CG45076-RI 1032 CG45076-PI 1..838 17..854 4190 100 Plus
CG45076-RH 1860 CG45076-PH 1195..1442 1280..1524 395 78.2 Plus
CG45076-RH 1860 CG45076-PH 1264..1508 1211..1458 395 78.2 Plus
CG45076-RA 1860 CG45076-PA 1195..1442 1280..1524 395 78.2 Plus
CG45076-RA 1860 CG45076-PA 1264..1508 1211..1458 395 78.2 Plus
CG45076-RH 1860 CG45076-PH 1102..1190 1373..1461 205 82 Plus
CG45076-RH 1860 CG45076-PH 1357..1445 1118..1206 205 82 Plus
CG45076-RA 1860 CG45076-PA 1102..1190 1373..1461 205 82 Plus
CG45076-RA 1860 CG45076-PA 1357..1445 1118..1206 205 82 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RH 2199 CG45076-RH 122..1980 15..1873 9295 100 Plus
CG45076-RA 2034 CG45076-RA 122..1980 15..1873 9295 100 Plus
CG45076-RI 2109 CG45076-RI 122..961 15..854 4200 100 Plus
CG45076-RH 2199 CG45076-RH 1318..1565 1280..1524 395 78.2 Plus
CG45076-RH 2199 CG45076-RH 1387..1631 1211..1458 395 78.2 Plus
CG45076-RA 2034 CG45076-RA 1318..1565 1280..1524 395 78.2 Plus
CG45076-RA 2034 CG45076-RA 1387..1631 1211..1458 395 78.2 Plus
CG45076-RH 2199 CG45076-RH 1225..1313 1373..1461 205 82 Plus
CG45076-RH 2199 CG45076-RH 1480..1568 1118..1206 205 82 Plus
CG45076-RA 2034 CG45076-RA 1225..1313 1373..1461 205 82 Plus
CG45076-RA 2034 CG45076-RA 1480..1568 1118..1206 205 82 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10768220..10769038 1873..1055 4095 100 Minus
3R 32079331 3R 10772113..10772604 610..119 2460 100 Minus
3R 32079331 3R 10769101..10769304 1057..854 1020 100 Minus
3R 32079331 3R 10771337..10771468 854..723 660 100 Minus
3R 32079331 3R 10771860..10771972 723..611 565 100 Minus
3R 32079331 3R 10768569..10768813 1458..1211 395 78.2 Minus
3R 32079331 3R 10768635..10768882 1524..1280 395 78.2 Minus
3R 32079331 3R 10777177..10777253 91..15 385 100 Minus
3R 32079331 3R 10768632..10768720 1206..1118 205 82 Minus
3R 32079331 3R 10768887..10768975 1461..1373 205 82 Minus
Blast to na_te.dros performed on 2014-11-26 16:16:45 has no hits.

BO15430.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:34:06 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 1..1860 17..1874 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:31 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 103..1970 7..1874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:56:44 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 124..1980 17..1875 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:34:07 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 103..1970 7..1874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:23 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
CG45076-RA 124..1980 17..1875 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:15:23 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10768218..10769036 1057..1875 99 <- Minus
3R 10769102..10769303 855..1056 100 <- Minus
3R 10771337..10771467 724..854 100 <- Minus
3R 10771860..10771972 611..723 100 <- Minus
3R 10772113..10772604 119..610 100 <- Minus
3R 10773135..10773161 92..118 100 <- Minus
3R 10777177..10777251 17..91 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:56:44 Download gff for BO15430.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6597059..6597189 724..854 100 <- Minus
arm_3R 6597582..6597694 611..723 100 <- Minus
arm_3R 6593940..6594758 1057..1875 99 <- Minus
arm_3R 6594824..6595025 855..1056 100 <- Minus
arm_3R 6597835..6598326 119..610 100 <- Minus
arm_3R 6598857..6598883 92..118 100 <- Minus
arm_3R 6602899..6602973 17..91 100   Minus

BO15430.pep Sequence

Translation from 16 to 1891

> BO15430.pep
MVYESGFTTRRTYSSRPVTTSYAVTYPSVEKVTRVYKSSYPIYSSYSVPR
RVYGATRVVTSPIRVVTSPARVVSRVIHSPSPVRVVRTTTRVISSPERTT
YSYTTPSTYYSPSYLPSTYTSTYIPTSYTTYTPSYAYSPTTVTRVYAPRS
SLSPLRITPSPVRVITSPVRSVPSYLKRLPPGYGARALTNYLNTEPFTTF
SEETSRIRNRAQSLIRDLHTPVVRRARSCTPFPVTGYTYEPASQLALDAY
VARVTNPVRHIAKEVHNISHYPRPAVKYVDAELDPNRPSRKFSAPRPLED
PLDVEAKEKQRLRQERLLTVNEEALDEVDLEKKRAQKADEAKRREERALK
EERDRLTAEAEKQAAAKAKKAAEEAAKIAAEEALLAEAAAQKAAEEAKAL
KAAEDAAQKAAEEARLAEEAAAQKVAEEAAQKAAEEARLAEEAAAQKAAE
EAAQKAAEEAALKAAEEARLAEEAAQKAAEEAALKAVEEARAAEEAAQKA
AEEARVAEEARLEEEQRVREQELERLAEIEKESEGELARQAAELAEIARQ
ESELAAQELQAIQKNENETSEPVVEEPVTPVEEQEPIIELGSNVTPTGGN
SYEEDLDAEEEEDEEEEEEASFLDH

BO15430.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-PH 619 CG45076-PH 1..619 1..619 3044 100 Plus
CG45076-PA 619 CG45076-PA 1..619 1..619 3044 100 Plus
CG45076-PI 343 CG45076-PI 1..279 1..279 1440 100 Plus
CG45076-PE 343 CG45076-PE 1..279 1..279 1440 100 Plus
CG45076-PH 619 CG45076-PH 12..530 118..624 295 28.1 Plus
CG45076-PA 619 CG45076-PA 12..530 118..624 295 28.1 Plus
CG6209-PA 607 CG6209-PA 256..546 305..568 273 34.7 Plus