Clone Sequence Records
BO15437.3prime Sequence
867 bp (754 high quality bases) assembled on 2006-05-29
> BO15437.3prime
ATGGTCTAGAAAGCTTGCCTGAGTGTATGCTAGTCCTTGGGTTCTGTGTA
AAGTAAACGAATCGTACACGCGCTGCAGCTCAGACAGACGATACTCCTCC
AGGCAAACGATTCCCTGGAGCGACGGAGATAGCTTCAGCGCGCACGATAG
GCAGTGGACCACATGTCGTTTCTCCTGCTCCTTGATGAACAGCACATTGA
AAACCTCAACCTCGCATTGTCCGCAGTAATGGGATGCTTCGTTCTTTCCG
CGTCCATTGAAACGTATTTCCACACCTTTCGATTTGACATACTCTTGTAT
GTGCAATACGTTTTTCAACGTTTGCAGCAAACACATTTTTATCAGCTCGA
AAAGTTTGGTATCAGACACTTTAATATTCCTTGCAAGATTCCAGCTTAAA
TGCACCATCGGCACAATGCTCTTGAAGGCCTGCACTTTATTCCACTCATA
TCGCTCGATGGCAAGAGAATACTGACGGGCAGTCAAGGGTCCAACATTCC
ACGCAATGTTGTTGCACCAACCGATCGACTGAACCCAATGGACGCATCCG
GCATTCACCCAAACCAAGTCACCGGGCTTTTGTATAAATCTATAAACTGG
TATATTCTCCTTGTATAAATCCTCCAGGACGGGCCACCACGAGCCGTGCA
GATAGCTAATGTTGTTCTTCTCGCAAAGATTGTGAACTCCGCCCCAGTAG
GCGTCAGGGACGGCAAACCATTCACAGTCGCCAGGACCGATGTTGATGTT
GATTGAGCAGAAGTTGTTGTTCTCTTGGTGGCCAGGCGTCCTACTTCCGG
GCACCTTCATGTACAGCTGAACGGTGTTCATGCCCAAATGGACGTGGCCC
ACGTGTGGATACATATT
BO15437.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5640-PA | 3411 | CG5640-RA | 2570..3408 | 857..19 | 4145 | 99.7 | Minus |
| CG5640-PB | 2820 | CG5640-RB | 1979..2817 | 857..19 | 4145 | 99.7 | Minus |
| CG5640-PC | 2820 | CG5640-RC | 1979..2817 | 857..19 | 4145 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:43:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Utx-RE | 3322 | CG5640-RE | 2386..3234 | 867..19 | 4170 | 99.5 | Minus |
| Utx-RD | 3591 | CG5640-RD | 2655..3503 | 867..19 | 4170 | 99.5 | Minus |
| Utx-RC | 3132 | CG5640-RC | 2196..3044 | 867..19 | 4170 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10273463..10273772 | 548..857 | 1520 | 99.4 | Plus |
| 2L | 23513712 | 2L | 10273197..10273407 | 338..548 | 1055 | 100 | Plus |
| 2L | 23513712 | 2L | 10272715..10272908 | 19..212 | 970 | 100 | Plus |
| 2L | 23513712 | 2L | 10272994..10273122 | 209..337 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:43:53 has no hits.
BO15437.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:54 Download gff for
BO15437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-PC | 1969..2820 | 18..867 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:58 Download gff for
BO15437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-PC | 1969..2820 | 18..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:06:35 Download gff for
BO15437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Utx-RC | 2196..3049 | 11..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:53:21 Download gff for
BO15437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Utx-RC | 2196..3049 | 11..867 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:53:21 Download gff for
BO15437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10272710..10272906 | 11..210 | 98 | <- | Plus |
| 2L | 10272996..10273122 | 211..337 | 100 | <- | Plus |
| 2L | 10273197..10273406 | 338..547 | 100 | <- | Plus |
| 2L | 10273463..10273782 | 548..867 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:06:35 Download gff for
BO15437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10272710..10272906 | 11..210 | 98 | <- | Plus |
| arm_2L | 10272996..10273122 | 211..337 | 100 | <- | Plus |
| arm_2L | 10273197..10273406 | 338..547 | 100 | <- | Plus |
| arm_2L | 10273463..10273782 | 548..867 | 98 | | Plus |
BO15437.5prime Sequence
849 bp (758 high quality bases) assembled on 2006-05-29
> BO15437.5prime
GAAGTTATCAGTCGACATGGGGCAACTAACTTTCGAAGATGATTGCCTGA
TCCGCGAACTGGATAGTCGATACTACGGCTTTTTGGATTTGTCCAATTCG
AAAAATGCGGAATTAAGGAATCTCGTTCAGCAGACCATCACAAACTTACA
AAACTACATTGCAAATGGTCAGGTTCACGAATCAAAGAACAGCAGTGATA
ATAAAAATGCTATACAAAAGTTTGAGCCATCAACTCAAGCAGGTGAACAT
ATGGAAAACACATCTTCCCGAAACAATGACGACACCAAACCTTTCGAGCA
AGATGCCAAGGAAAAGGTGTCCATCATTGAAGAAAAACACCAGGATGAAC
ACTACGTTAACGCTCTTTGCAAACTTGGCCACCTGCATCTTCTTCTTGGC
GAATACTCCGAAGCTTTATCAGCGTACCAAAAGTATTTAAGATTCCGAGA
AAACAATTACTGGACAAATCATGCATTTATCTATGGAATAGGCGTTGCTT
ATTTTAAACTTCGGTGCTTTAAATGGGCCATCAAATCGTTTCAGGAGCTT
TTATACCTAAGTCCCAATTTTACATGTGCAAATGAAGTTCATTTGCGTCT
AGGTCTTATGCTAAAACACTGCGGGGAGTTCCATATTGCCCTAAAACATT
TACAATTGGCGCTGCTTTATACATATCCTTCGACCTTTTCGGAACTTCAG
GTCAAATTTCAAATCGCGCATTTGTACGAAGTTCAAAACAAGCACAAGGC
GGCAAAGGATGGCTACGAATTTCTTCTAAATGAGAAAAACATCTCCTTGG
AGCTCAAAGCAGATGTTTATCGACAATTAGGATGGATGTACCATTGCGT
BO15437.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5640-PA | 3411 | CG5640-RA | 1..833 | 17..849 | 4165 | 100 | Plus |
| CG5640-PB | 2820 | CG5640-RB | 1..242 | 608..849 | 1210 | 100 | Plus |
| CG5640-PC | 2820 | CG5640-RC | 1..242 | 608..849 | 1210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Utx-RD | 3591 | CG5640-RD | 114..946 | 17..849 | 4165 | 100 | Plus |
| Utx-RA | 3609 | CG5640-RA | 114..946 | 17..849 | 4165 | 100 | Plus |
| Utx-RB | 3446 | CG5640-RB | 146..481 | 514..849 | 1635 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:19:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10278250..10278598 | 413..65 | 1745 | 100 | Minus |
| 2L | 23513712 | 2L | 10276392..10276568 | 701..525 | 885 | 100 | Minus |
| 2L | 23513712 | 2L | 10275983..10276113 | 831..701 | 655 | 100 | Minus |
| 2L | 23513712 | 2L | 10277813..10277927 | 526..412 | 575 | 100 | Minus |
| 2L | 23513712 | 2L | 10278649..10278698 | 66..17 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:19:46 has no hits.
BO15437.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:47:55 Download gff for
BO15437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-PA | 1..833 | 17..849 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:59 Download gff for
BO15437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-PA | 1..833 | 17..849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:58:12 Download gff for
BO15437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Utx-RA | 114..946 | 17..849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:58:15 Download gff for
BO15437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Utx-RA | 114..946 | 17..849 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:58:15 Download gff for
BO15437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10275904..10275922 | 831..849 | 100 | <- | Minus |
| 2L | 10275984..10276112 | 702..830 | 100 | <- | Minus |
| 2L | 10276392..10276567 | 526..701 | 100 | <- | Minus |
| 2L | 10277814..10277925 | 414..525 | 100 | <- | Minus |
| 2L | 10278250..10278596 | 67..413 | 100 | <- | Minus |
| 2L | 10278649..10278698 | 17..66 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:58:12 Download gff for
BO15437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10276392..10276567 | 526..701 | 100 | <- | Minus |
| arm_2L | 10277814..10277925 | 414..525 | 100 | <- | Minus |
| arm_2L | 10275984..10276112 | 702..830 | 100 | <- | Minus |
| arm_2L | 10275904..10275922 | 831..849 | 100 | <- | Minus |
| arm_2L | 10278250..10278596 | 67..413 | 100 | <- | Minus |
| arm_2L | 10278649..10278698 | 17..66 | 100 | | Minus |
BO15437.complete Sequence
3442 bp assembled on 2006-10-11
GenBank Submission: FJ633463
> BO15437.complete
GAAGTTATCAGTCGACATGGGGCAACTAACTTTCGAAGATGATTGCCTGA
TCCGCGAACTGGATAGTCGATACTACGGCTTTTTGGATTTGTCCAATTCG
AAAAATGCGGAATTAAGGAATCTCGTTCAGCAGACCATCACAAACTTACA
AAACTACATTGCAAATGGTCAGGTTCACGAATCAAAGAACAGCAGTGATA
ATAAAAATGCTATACAAAAGTTTGAGCCATCAACTCAAGCAGGTGAACAT
ATGGAAAACACATCTTCCCGAAACAATGACGACACCAAACCTTTCGAGCA
AGATGCCAAGGAAAAGGTGTCCATCATTGAAGAAAAACACCAGGATGAAC
ACTACGTTAACGCTCTTTGCAAACTTGGCCACCTGCATCTTCTTCTTGGC
GAATACTCCGAAGCTTTATCAGCGTACCAAAAGTATTTAAGATTCCGAGA
AAACAATTACTGGACAAATCATGCATTTATCTATGGAATAGGCGTTGCTT
ATTTTAAACTTCGGTGCTTTAAATGGGCCATCAAATCGTTTCAGGAGCTT
TTATACCTAAGTCCCAATTTTACATGTGCAAATGAAGTTCATTTGCGTCT
AGGTCTTATGCTAAAACACTGCGGGGAGTTCCATATTGCCCTAAAACATT
TACAATTGGCGCTGCTTTATACATATCCTTCGACCTTTTCGGAACTTCAG
GTCAAATTTCAAATCGCGCATTTGTACGAAGTTCAAAACAAGCACAAGGC
GGCAAAGGATGGCTACGAATTTCTTCTAAATGAGAAAAACATCTCCTTGG
AGCTCAAAGCAGATGTTTATCGACAATTAGGATGGATGTACCATTGCGTA
GAATGCCTAGGCGAAAAAAAGGAACGTGAAGCAAACGCATTAAATTTTCT
ACAAAAATCAATCGAAGCTGACCCAAAGAGTGGACAATCATTATATTTAC
TAGGAAGGTGTTACGCCGGCATCAATAAGGTTCATGATGCTTTCCTAGCA
TATCGCAACTCGGTGGAAAAAAGTGAGGGGAATGCTGATACTTGGTGCTC
AATCGGCGTCTTATATCAGCAACAAAATCAACCCACGGATGCCCTTCAAG
CCTACATATGTGCTGTGCAACTGGATAAAGACCATAAAGCCGCGTGGACC
AACCTGGGTATACTTTATGAGAGCTGTGGTCAATTACGAGATGCCTATGC
TTGCTACTTAAATGCAACCAAACAAATATCATTCCAGAAGTCTTCGTTAA
TTCGAAAAAAACAAGCAATACGTATGAAAAAGGACACAATTGGACTGTCG
AAAGGCCTGTCTCAGAGAATCACTTTCCTGGAGGGCCAGCTCAGTCAAGC
ACCATTGCCAAGTATTACATCCAAGCGCCGCCAGCTGTGTTCAATCGAAG
AAGCTTGGAACCTGCCAATATCATTAGAAATGAACTCTCGCCAACAACAA
ACAGCGCAGATGCTACCAAGACAGGTCACAAAGCAAAGTCCAGTACAGGG
ACCGCCACCACCTTATCCGCATAGCCAACTCAGCCAAAGTCCCATACCTT
CGAAACGTATTAAGGAAGATGGCACAAGCCAACAAGAAGTAACACAAAAC
AACAGTCAGACATCAGCGCAAAATCTAATAAACATTTCGGAATCTTTAAA
CCAGCGCAACTTCAACGCCATGCCGGAGAGCAACAAAAGTTCGGAGCAAA
GTGTTCTTGACACCTTCGACGACATCTCGAATGATATTTATAAACAGAAT
GAGAGCATCAAGCTCGAACGTTTGAGCCAGGATGCACTGAGTAACAATGA
GGACTCGAGGCATGATTTTATTGGCGGTGACAACGCCGACATCTCGACCA
CGTTCAAAATACAAATGGACTCGAAGCAGTTGATGGTAGCTGTGAAGCTG
CTGCCGATTGATGAACCGCCCGTGCACTGTACCATTTTGCAAGTGAATGC
GCCGCCGCCATCTCCGCCCGATTGCCCACCGCAGAAACTGACGCGAGATC
AACTCCTGCCTCCCACACCCTCTGTTCATTTAGAAAATAAGAAGCACGCG
TTCAGCCCACAGTTGCAGGAGTTTTGCCTGAAACATCCGATTGCCGTTGT
ACGCGGCTTAGCGGGCGTCTTGAAGCTAGATCTCGGTCTCTTTTCGACCA
AAACGTTGGTGGAAGCCAACCCGGACCATAGTGTTGAGGTTCGGACACAA
GTGCACCAGTCTCCCGATGAAAATTGGGACACTTCGCAGGGTAAGCGCGT
CTGGGCCTGCATTTCCCATCGGTCTCACACAACCATAGCCAAATATGCCC
AATATCAGGCATCCAGTTTTCAAGACAGCTTGAAGCTTATTTTACCGCAG
GATGAAAGCGATAAAGGTTTCCCCGGCTCGCAAGCAATGTCGGATTCAGA
CTCAAAGGACTCGGTATCCAATTCGAACATTGTTCTCAAACGTAAAAAAC
ACAAAATAAACAGCAAAATGTTGAGGTTCGGGACCAACGTGGACCTCTCC
GATGAAAAGAAATGGAAACCACAATTAACAGAGCTACAAAAACTGCCAGC
TTTTGCGCGAGTTATATCCGCTGCCAATATGCTATCACACGTGGGCCACG
TCATTTTGGGCATGAACACCGTTCAGCTGTACATGAAGGTGCCCGGAAGT
AGGACGCCTGGCCACCAAGAGAACAACAACTTCTGCTCAATCAACATCAA
CATCGGTCCTGGCGACTGTGAATGGTTTGCCGTCCCTGACGCCTACTGGG
GCGGAGTTCACAATCTTTGCGAGAAGAACAACATTAGCTATCTGCACGGC
TCGTGGTGGCCCGTCCTGGAGGATTTATACAAGGAGAATATACCAGTTTA
TAGATTTATACAAAAGCCCGGTGACTTGGTTTGGGTGAATGCCGGATGCG
TCCATTGGGTTCAGTCGATCGGTTGGTGCAACAACATTGCGTGGAATGTT
GGACCCTTGACTGCCCGTCAGTATTCTCTTGCCATCGAGCGATATGAGTG
GAATAAAGTGCAGGCCTTCAAGAGCATTGTGCCGATGGTGCATTTAAGCT
GGAATCTTGCAAGGAATATTAAAGTGTCTGATACCAAACTTTTCGAGCTG
ATAAAAATGTGTTTGCTGCAAACGTTGAAAAACGTATTGCACATACAAGA
GTATGTCAAATCGAAAGGTGTGGAAATACGTTTCAATGGACGCGGAAAGA
ACGAAGCATCCCATTACTGCGGACAATGCGAGGTTGAGGTTTTCAATGTG
CTGTTCATCAAGGAGCAGGAGAAACGACATGTGGTCCACTGCCTATCGTG
CGCGCTGAAGCTATCTCCGTCGCTCCAGGGAATCGTTTGCCTGGAGGAGT
ATCGTCTGTCTGAGCTGCAGCGCGTGTACGATTCGTTTACTTTACACAGA
ACCCAAGGACTAGCATACACTCAGGCAAGCTTTCTAGACCAT
BO15437.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Utx-RA | 3411 | CG5640-PA | 1..3408 | 17..3424 | 17040 | 100 | Plus |
| Utx-RD | 3393 | CG5640-PD | 1..3390 | 17..3424 | 16700 | 99.5 | Plus |
| Utx-RC | 2820 | CG5640-PC | 1..2817 | 608..3424 | 14085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Utx-RA | 3609 | CG5640-RA | 114..3521 | 17..3424 | 17040 | 100 | Plus |
| Utx-RD | 3591 | CG5640-RD | 114..3503 | 17..3424 | 16700 | 99.5 | Plus |
| Utx-RB | 3446 | CG5640-RB | 146..3056 | 514..3424 | 14510 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10274165..10274868 | 2335..1632 | 3520 | 100 | Minus |
| 2L | 23513712 | 2L | 10273463..10273884 | 2895..2474 | 2110 | 100 | Minus |
| 2L | 23513712 | 2L | 10278250..10278598 | 413..65 | 1745 | 100 | Minus |
| 2L | 23513712 | 2L | 10275126..10275389 | 1499..1236 | 1320 | 100 | Minus |
| 2L | 23513712 | 2L | 10275697..10275925 | 1056..828 | 1145 | 100 | Minus |
| 2L | 23513712 | 2L | 10273197..10273407 | 3105..2895 | 1055 | 100 | Minus |
| 2L | 23513712 | 2L | 10272715..10272908 | 3424..3231 | 970 | 100 | Minus |
| 2L | 23513712 | 2L | 10275449..10275630 | 1237..1056 | 910 | 100 | Minus |
| 2L | 23513712 | 2L | 10276392..10276568 | 701..525 | 885 | 100 | Minus |
| 2L | 23513712 | 2L | 10273964..10274107 | 2477..2334 | 720 | 100 | Minus |
| 2L | 23513712 | 2L | 10274934..10275070 | 1631..1495 | 685 | 100 | Minus |
| 2L | 23513712 | 2L | 10275983..10276113 | 831..701 | 655 | 100 | Minus |
| 2L | 23513712 | 2L | 10272994..10273122 | 3234..3106 | 645 | 100 | Minus |
| 2L | 23513712 | 2L | 10277813..10277927 | 526..412 | 575 | 100 | Minus |
| 2L | 23513712 | 2L | 10278649..10278698 | 66..17 | 250 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 13:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tc3 | 1743 | Tc3 TC3 1743bp | 858..927 | 2481..2548 | 120 | 67.6 | Plus |
BO15437.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:33:41 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-RA | 1..3411 | 17..3425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:19 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-RA | 114..3526 | 17..3432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:52 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Utx-RA | 114..3521 | 17..3426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:33:42 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5640-RA | 114..3526 | 17..3432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:42 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Utx-RA | 114..3521 | 17..3426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:42 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10272713..10272906 | 3233..3426 | 98 | <- | Minus |
| 2L | 10272996..10273122 | 3106..3232 | 100 | <- | Minus |
| 2L | 10273197..10273406 | 2896..3105 | 100 | <- | Minus |
| 2L | 10273463..10273882 | 2476..2895 | 100 | <- | Minus |
| 2L | 10273966..10274105 | 2336..2475 | 100 | <- | Minus |
| 2L | 10274165..10274868 | 1632..2335 | 100 | <- | Minus |
| 2L | 10274934..10275066 | 1499..1631 | 100 | <- | Minus |
| 2L | 10275127..10275387 | 1238..1498 | 100 | <- | Minus |
| 2L | 10275449..10275629 | 1057..1237 | 100 | <- | Minus |
| 2L | 10275697..10275922 | 831..1056 | 100 | <- | Minus |
| 2L | 10275984..10276112 | 702..830 | 100 | <- | Minus |
| 2L | 10276392..10276567 | 526..701 | 100 | <- | Minus |
| 2L | 10277814..10277925 | 414..525 | 100 | <- | Minus |
| 2L | 10278250..10278596 | 67..413 | 100 | <- | Minus |
| 2L | 10278649..10278698 | 17..66 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:52 Download gff for
BO15437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10272713..10272906 | 3233..3426 | 98 | <- | Minus |
| arm_2L | 10272996..10273122 | 3106..3232 | 100 | <- | Minus |
| arm_2L | 10273197..10273406 | 2896..3105 | 100 | <- | Minus |
| arm_2L | 10273463..10273882 | 2476..2895 | 100 | <- | Minus |
| arm_2L | 10273966..10274105 | 2336..2475 | 100 | <- | Minus |
| arm_2L | 10274165..10274868 | 1632..2335 | 100 | <- | Minus |
| arm_2L | 10274934..10275066 | 1499..1631 | 100 | <- | Minus |
| arm_2L | 10275127..10275387 | 1238..1498 | 100 | <- | Minus |
| arm_2L | 10275449..10275629 | 1057..1237 | 100 | <- | Minus |
| arm_2L | 10275697..10275922 | 831..1056 | 100 | <- | Minus |
| arm_2L | 10275984..10276112 | 702..830 | 100 | <- | Minus |
| arm_2L | 10276392..10276567 | 526..701 | 100 | <- | Minus |
| arm_2L | 10277814..10277925 | 414..525 | 100 | <- | Minus |
| arm_2L | 10278250..10278596 | 67..413 | 100 | <- | Minus |
| arm_2L | 10278649..10278698 | 17..66 | 100 | | Minus |
BO15437.pep Sequence
Translation from 16 to 3442
> BO15437.pep
MGQLTFEDDCLIRELDSRYYGFLDLSNSKNAELRNLVQQTITNLQNYIAN
GQVHESKNSSDNKNAIQKFEPSTQAGEHMENTSSRNNDDTKPFEQDAKEK
VSIIEEKHQDEHYVNALCKLGHLHLLLGEYSEALSAYQKYLRFRENNYWT
NHAFIYGIGVAYFKLRCFKWAIKSFQELLYLSPNFTCANEVHLRLGLMLK
HCGEFHIALKHLQLALLYTYPSTFSELQVKFQIAHLYEVQNKHKAAKDGY
EFLLNEKNISLELKADVYRQLGWMYHCVECLGEKKEREANALNFLQKSIE
ADPKSGQSLYLLGRCYAGINKVHDAFLAYRNSVEKSEGNADTWCSIGVLY
QQQNQPTDALQAYICAVQLDKDHKAAWTNLGILYESCGQLRDAYACYLNA
TKQISFQKSSLIRKKQAIRMKKDTIGLSKGLSQRITFLEGQLSQAPLPSI
TSKRRQLCSIEEAWNLPISLEMNSRQQQTAQMLPRQVTKQSPVQGPPPPY
PHSQLSQSPIPSKRIKEDGTSQQEVTQNNSQTSAQNLINISESLNQRNFN
AMPESNKSSEQSVLDTFDDISNDIYKQNESIKLERLSQDALSNNEDSRHD
FIGGDNADISTTFKIQMDSKQLMVAVKLLPIDEPPVHCTILQVNAPPPSP
PDCPPQKLTRDQLLPPTPSVHLENKKHAFSPQLQEFCLKHPIAVVRGLAG
VLKLDLGLFSTKTLVEANPDHSVEVRTQVHQSPDENWDTSQGKRVWACIS
HRSHTTIAKYAQYQASSFQDSLKLILPQDESDKGFPGSQAMSDSDSKDSV
SNSNIVLKRKKHKINSKMLRFGTNVDLSDEKKWKPQLTELQKLPAFARVI
SAANMLSHVGHVILGMNTVQLYMKVPGSRTPGHQENNNFCSININIGPGD
CEWFAVPDAYWGGVHNLCEKNNISYLHGSWWPVLEDLYKENIPVYRFIQK
PGDLVWVNAGCVHWVQSIGWCNNIAWNVGPLTARQYSLAIERYEWNKVQA
FKSIVPMVHLSWNLARNIKVSDTKLFELIKMCLLQTLKNVLHIQEYVKSK
GVEIRFNGRGKNEASHYCGQCEVEVFNVLFIKEQEKRHVVHCLSCALKLS
PSLQGIVCLEEYRLSELQRVYDSFTLHRTQGLAYTQASFLDH
BO15437.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Utx-PA | 1136 | CG5640-PA | 1..1136 | 1..1136 | 6015 | 100 | Plus |
| Utx-PD | 1130 | CG5640-PD | 1..1130 | 1..1136 | 5958 | 99.5 | Plus |
| Utx-PC | 939 | CG5640-PC | 1..939 | 198..1136 | 4968 | 100 | Plus |
| Utx-PB | 939 | CG5640-PB | 1..939 | 198..1136 | 4968 | 100 | Plus |
| Utx-PE | 934 | CG5640-PE | 1..934 | 198..1136 | 4928 | 99.5 | Plus |
