Clone BO15449 Report

Search the DGRC for BO15449

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG32536-RA
Protein status:BO15449.pep: validated full length
Sequenced Size:691

Clone Sequence Records

BO15449.3prime Sequence

689 bp (688 high quality bases) assembled on 2006-05-29

> BO15449.3prime
ATGGTCTAGAAAGCTTGCCGCCGCTCGCTGTCCGGCGGTCAGTCGCTGAG
CGCCCACAGTGGGCGGGGCCGGGCGGACGGGCGGCTGTCGCTGATGGCGC
AACTCACGACGCTTCTCACGCAGAATGTGCTTGGTCTGGGAGGTGTCCAG
CTCCTCCCAGCCGCCGGCATTATCATCCACCCAGTCCTCGAGATCGGCAT
TTACGCTAATTGGCACCAAGTCCTGGGCCTGCAGTCTTGAAAAGTCACTT
TGTTGGCTGGTCGCCGCACTCGTGGATGGATCCTCCAGGTAGAACTTCAT
CTGCGGCTTGATGGTGGGCGTCAGCTCACTGAAGAAGTCCGGTTCGGGTT
CCTCCTTGGGCGGAGTGGGTGGCTGGGCCATTCGCTGGCGGTACTGCTCG
ATGTGCTCCTCCACGGTGCGCGGACTGTCGTCCCAGGAGTTCCAGTCCCG
CTCGCGCGCCCCCGCTGTCCTGCCACCGCCGGCCTGGCCAGCGGAGGTGG
CGCCGGTGGCGGAGAAGTCGCCTCGCTCCACGATCACGTTGACCGCTTGC
AGTTGGTCGGCGGATCCGGTGGCGGAGCCGCTGTGGCTGAGCTTGCGGCG
CCTGGAGAAGCAGCACAAGGCACGCCGGCACAGCGTGATGATGCCCAGCA
CCAGCATCTTGATTTGCTGCAGCATGTCGACTGATAACT

BO15449.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-PA 660 CG32536-RA 1..657 675..19 3285 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-RA 887 CG32536-RA 75..731 675..19 3285 100 Minus
CG32537-RA 2442 CG32537-RA 323..631 327..19 1545 100 Minus
CG32537-RA 2442 CG32537-RA 1..64 390..327 320 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19276476..19276824 327..675 1745 100 Plus
X 23542271 X 19275160..19275339 19..198 900 100 Plus
X 23542271 X 19275399..19275528 198..327 650 100 Plus
Blast to na_te.dros performed on 2015-02-12 04:23:21 has no hits.

BO15449.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:13 Download gff for BO15449.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-PA 1..660 18..675 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:24 Download gff for BO15449.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-PA 1..660 18..675 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:38:48 Download gff for BO15449.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 59..736 11..689 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:56:37 Download gff for BO15449.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 59..736 11..689 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:37 Download gff for BO15449.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19275155..19275339 11..198 97 <- Plus
X 19275400..19275528 199..327 100 <- Plus
X 19276477..19276840 328..689 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:38:48 Download gff for BO15449.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19169188..19169372 11..198 97 <- Plus
arm_X 19169433..19169561 199..327 100 <- Plus
arm_X 19170510..19170873 328..689 98   Plus

BO15449.5prime Sequence

689 bp (688 high quality bases) assembled on 2006-05-29

> BO15449.5prime
GAAGTTATCAGTCGACATGCTGCAGCAAATCAAGATGCTGGTGCTGGGCA
TCATCACGCTGTGCCGGCGTGCCTTGTGCTGCTTCTCCAGGCGCCGCAAG
CTCAGCCACAGCGGCTCCGCCACCGGATCCGCCGACCAACTGCAAGCGGT
CAACGTGATCGTGGAGCGAGGCGACTTCTCCGCCACCGGCGCCACCTCCG
CTGGCCAGGCCGGCGGTGGCAGGACAGCGGGGGCGCGCGAGCGGGACTGG
AACTCCTGGGACGACAGTCCGCGCACCGTGGAGGAGCACATCGAGCAGTA
CCGCCAGCGAATGGCCCAGCCACCCACTCCGCCCAAGGAGGAACCCGAAC
CGGACTTCTTCAGTGAGCTGACGCCCACCATCAAGCCGCAGATGAAGTTC
TACCTGGAGGATCCATCCACGAGTGCGGCGACCAGCCAACAAAGTGACTT
TTCAAGACTGCAGGCCCAGGACTTGGTGCCAATTAGCGTAAATGCCGATC
TCGAGGACTGGGTGGATGATAATGCCGGCGGCTGGGAGGAGCTGGACACC
TCCCAGACCAAGCACATTCTGCGTGAGAAGCGTCGTGAGTTGCGCCATCA
GCGACAGCCGCCCGTCCGCCCGGCCCCGCCCACTGTGGGCGCTCAGCGAC
TGACCGCCGGACAGCGAGCGGCGGCAAGCTTTCTAGACC

BO15449.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-PA 660 CG32536-RA 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-RA 887 CG32536-RA 75..731 17..673 3285 100 Plus
CG32537-RA 2442 CG32537-RA 323..631 365..673 1545 100 Plus
CG32537-RA 2442 CG32537-RA 1..64 302..365 320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19276476..19276824 365..17 1745 100 Minus
X 23542271 X 19275160..19275339 673..494 900 100 Minus
X 23542271 X 19275399..19275528 494..365 650 100 Minus
Blast to na_te.dros performed on 2015-02-13 14:13:44 has no hits.

BO15449.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:14 Download gff for BO15449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-PA 1..660 17..674 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:25 Download gff for BO15449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-PA 1..660 17..674 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 03:03:14 Download gff for BO15449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 59..736 3..681 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:01:14 Download gff for BO15449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 59..736 3..681 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:01:14 Download gff for BO15449.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19275155..19275339 494..681 97 <- Minus
X 19275400..19275528 365..493 100 <- Minus
X 19276477..19276840 3..364 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 03:03:14 Download gff for BO15449.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19169188..19169372 494..681 97 <- Minus
arm_X 19169433..19169561 365..493 100 <- Minus
arm_X 19170510..19170873 3..364 98   Minus

BO15449.complete Sequence

691 bp (691 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633472

> BO15449.complete
GAAGTTATCAGTCGACATGCTGCAGCAAATCAAGATGCTGGTGCTGGGCA
TCATCACGCTGTGCCGGCGTGCCTTGTGCTGCTTCTCCAGGCGCCGCAAG
CTCAGCCACAGCGGCTCCGCCACCGGATCCGCCGACCAACTGCAAGCGGT
CAACGTGATCGTGGAGCGAGGCGACTTCTCCGCCACCGGCGCCACCTCCG
CTGGCCAGGCCGGCGGTGGCAGGACAGCGGGGGCGCGCGAGCGGGACTGG
AACTCCTGGGACGACAGTCCGCGCACCGTGGAGGAGCACATCGAGCAGTA
CCGCCAGCGAATGGCCCAGCCACCCACTCCGCCCAAGGAGGAACCCGAAC
CGGACTTCTTCAGTGAGCTGACGCCCACCATCAAGCCGCAGATGAAGTTC
TACCTGGAGGATCCATCCACGAGTGCGGCGACCAGCCAACAAAGTGACTT
TTCAAGACTGCAGGCCCAGGACTTGGTGCCAATTAGCGTAAATGCCGATC
TCGAGGACTGGGTGGATGATAATGCCGGCGGCTGGGAGGAGCTGGACACC
TCCCAGACCAAGCACATTCTGCGTGAGAAGCGTCGTGAGTTGCGCCATCA
GCGACAGCCGCCCGTCCGCCCGGCCCCGCCCACTGTGGGCGCTCAGCGAC
TGACCGCCGGACAGCGAGCGGCGGCAAGCTTTCTAGACCAT

BO15449.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:40:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-RA 660 CG32536-PA 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-RA 887 CG32536-RA 75..731 17..673 3285 100 Plus
CG32537-RA 2442 CG32537-RA 323..631 365..673 1545 100 Plus
CG32537-RA 2442 CG32537-RA 1..64 302..365 320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19276476..19276824 365..17 1745 100 Minus
X 23542271 X 19275160..19275339 673..494 900 100 Minus
X 23542271 X 19275399..19275528 494..365 650 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:40:15 has no hits.

BO15449.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:51 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 1..660 17..674 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:31:54 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 33..710 3..681 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:31:43 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 75..731 17..675 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:52 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 33..710 3..681 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:23:53 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
CG32536-RA 75..731 17..675 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:23:53 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
X 19275158..19275339 494..675 98 <- Minus
X 19275400..19275528 365..493 100 <- Minus
X 19276477..19276824 17..364 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:31:43 Download gff for BO15449.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19169191..19169372 494..675 98 <- Minus
arm_X 19169433..19169561 365..493 100 <- Minus
arm_X 19170510..19170857 17..364 100   Minus

BO15449.pep Sequence

Translation from 16 to 691

> BO15449.pep
MLQQIKMLVLGIITLCRRALCCFSRRRKLSHSGSATGSADQLQAVNVIVE
RGDFSATGATSAGQAGGGRTAGARERDWNSWDDSPRTVEEHIEQYRQRMA
QPPTPPKEEPEPDFFSELTPTIKPQMKFYLEDPSTSAATSQQSDFSRLQA
QDLVPISVNADLEDWVDDNAGGWEELDTSQTKHILREKRRELRHQRQPPV
RPAPPTVGAQRLTAGQRAAASFLDH

BO15449.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32536-PA 219 CG32536-PA 1..219 1..219 1145 100 Plus