Clone BO15451 Report

Search the DGRC for BO15451

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptdah-RA
Protein status:BO15451.pep: validated full length
Sequenced Size:1981

Clone Sequence Records

BO15451.3prime Sequence

828 bp (779 high quality bases) assembled on 2006-05-29

> BO15451.3prime
ATGGTCTAGAAAGCTTGCCGTGCTGATGCGCCGCTGCTGCTCCTCGCTCT
TGATGATGCTATCGAGAACGTTCTCCAGATTTTGCGTGGCCGCCGACAGT
TCGGCATTATCGCTGTACGAGTCCTCGACGATCTCCTTGACCTTGTGCAG
CAGCAGCTTAAAGTTCACCATCTCGGTGTCGCGGCCATCTCCGCCGTTTG
CCGGCTGCTGTTCCAGTAGAGCACCCAGCGGCATGGGCAGCGGCAGAGGA
GCCGGCAGGGAACCAGGTCCTTGTCCTGGCTGGACACTCGAGCGACGCTG
GTCGAACCACAAGCTTATGTCGTTGAGCGAGTAATCCGATTTGTTTGCCT
CCAGATAGCTGCGATTCAAGTCGGCGCCATTTATGGAGTGCGTGAGATTG
GCACCCACGGGCGCATACATGTCGAATAGCATCTGTCGCTGAGGCGTGCT
GGAGCTAAGGAACGTGGAGCTGACTAGGGGCGCAGCTGAAGGCGCCACTT
GGGCAGCTGGCGCAGGTGGCGGCGAAGTTACCGCTGAGGCATGTGATAGC
TGTCGCATATCCTCGATAATCTGCAGCAGAAAGCACTGATGGGCGCTCAG
AAACTGCGATATTTCCGAACTAGATGCGGTGGCCACTGTTTGCAGCTGGG
TTTCCAGCTTCGCATTTTGCAAAAGCAATCGATCGATGATGGACTGCAGC
CTGCTGGACGCCTCGCTGGCTAGACCCGTCAGGGAGCAGAGCTCCTGCTG
CTGTTGCTGCAGGACCACTGTGCGGTCCTTCTCCTGGCACTGACTGCGCA
CACTGCGCGTCTCTGCGGGAATGGGCGT

BO15451.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6157-PA 1950 dah-RA 1138..1947 828..19 4025 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RB 2344 CG6157-RB 1231..2040 828..19 4035 99.9 Minus
dah-RA 2353 CG6157-RA 1240..2049 828..19 4035 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15330334..15330698 383..19 1825 100 Minus
X 23542271 X 15329701..15329868 828..661 825 99.4 Minus
X 23542271 X 15330112..15330271 543..384 800 100 Minus
X 23542271 X 15329932..15330049 661..544 590 100 Minus
Blast to na_te.dros performed on 2015-01-30 18:38:09 has no hits.

BO15451.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:17 Download gff for BO15451.3prime
Subject Subject Range Query Range Percent Splice Strand
dah-PA 1138..1950 16..828 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:29 Download gff for BO15451.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6157-PA 1138..1950 16..828 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:00:30 Download gff for BO15451.3prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 1240..2049 19..828 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:13:29 Download gff for BO15451.3prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 1240..2049 19..828 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:13:29 Download gff for BO15451.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15329701..15329867 662..828 99 -> Minus
X 15329932..15330049 544..661 100 -> Minus
X 15330112..15330271 384..543 100 -> Minus
X 15330334..15330698 19..383 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:00:30 Download gff for BO15451.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15223734..15223900 662..828 99 -> Minus
arm_X 15223965..15224082 544..661 100 -> Minus
arm_X 15224145..15224304 384..543 100 -> Minus
arm_X 15224367..15224731 19..383 100   Minus

BO15451.5prime Sequence

896 bp (839 high quality bases) assembled on 2006-05-29

> BO15451.5prime
GAAGTTATCAGTCGACATGCTGAGATCGTCGGTGCCCGTGCAGCTGACAA
AACTGCGAAATAGCGCCGAGGCCGTGGCGTCCATTGCCCGCGAAAAGGGA
TCCCAAGGTGGCCAAGGACAAAAGCAACAGGTGGACAAAGAGCTATCCAC
CATCATGGATGACTTGCAGCGGGATTACGGGAATTACAAGTACACGGTAT
ACCGGTGCGCCAGTAAATTTGTGGCGCTGCAAAAGATATTTCACACTGGA
AAAATCCCCTACAAGCTGGTTTTGGCCATTTTGGATCGCCATAACTTGAG
TGGTGGCCTGGAACTGATGGTTCCTCCATTCCAGTTGACCTCCCTGCTGC
ACGATGTATACTTTGCCTGCGAGAAACTAGGCCATTTCAACCAGGATGCG
AACTATAAACTGGACAGGGCAACCGGGCTGTTGGCCAACTTCTTCTGGAA
TGTCTACGATCCGCAACGCAGACACTCCATATCCCTGTTAGAGATCAGGA
TCACCTTCATACTGCTGTGCAAGCTATATAGCAGCGATCACCTGGTGGGC
GACATCTTTGGCCTGCTGGCCGATCCCAAGTCGCAGATCATCTCCAGATA
TGCATTCGAACAGCTCCTAGCCACGCTGAGCAAGTTACTCAGCTATTTGG
GCGAGGCCAAGGCCTATGGCGTCCACAATCTTCCGTTGGCTATGGAGCAG
TGCTTTGCCCGCTGTCCGCATGGCGTTGGTGGACTGACCGAGCCGCAGTT
CCACAAACTCTGGACGGGAGCGGGTGTCCAGACGAGATTCCTGATCTATG
GCAATCTGCTGGCACTGGTGAAACGCATCGAGGACACCGAGCATTTGATT
CACAGTAATTCTTGTGCCGGCTGGCCGCAGGAGCACATTGTGAGCA

BO15451.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6157-PA 1950 dah-RA 1..857 17..873 4285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RA 2353 CG6157-RA 103..982 17..896 4340 99.7 Plus
dah-RB 2344 CG6157-RB 103..973 17..896 4195 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:15:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15329010..15329443 463..896 2095 98.8 Plus
X 23542271 X 15328444..15328672 17..245 1145 100 Plus
X 23542271 X 15328736..15328953 246..463 1090 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:15:42 has no hits.

BO15451.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:18 Download gff for BO15451.5prime
Subject Subject Range Query Range Percent Splice Strand
dah-PA 1..879 17..895 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:31 Download gff for BO15451.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6157-PA 1..879 17..895 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:55:17 Download gff for BO15451.5prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..981 17..895 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:21:51 Download gff for BO15451.5prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..981 17..895 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:21:51 Download gff for BO15451.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15328736..15328952 246..462 100 -> Plus
X 15328444..15328672 17..245 100 -> Plus
X 15329010..15329442 463..895 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:55:17 Download gff for BO15451.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15222477..15222705 17..245 100 -> Plus
arm_X 15222769..15222985 246..462 100 -> Plus
arm_X 15223043..15223475 463..895 99   Plus

BO15451.complete Sequence

1981 bp assembled on 2006-10-11

GenBank Submission: FJ633474

> BO15451.complete
GAAGTTATCAGTCGACATGCTGAGATCGTCGGTGCCCGTGCAGCTGACAA
AACTGCGAAATAGCGCCGAGGCCGTGGCGTCCATTGCCCGCGAAAAGGGA
TCCCAAGGTGGCCAAGGACAAAAGCAACAGGTGGACAAAGAGCTATCCAC
CATCATGGATGACTTGCAGCGGGATTACGGGAATTACAAGTACACGGTAT
ACCGGTGCGCCAGTAAATTTGTGGCGCTGCAAAAGATATTTCACACTGGA
AAAATCCCCTACAAGCTGGTTTTGGCCATTTTGGATCGCCATAACTTGAG
TGGTGGCCTGGAACTGATGGTTCCTCCATTCCAGTTGACCTCCCTGCTGC
ACGATGTATACTTTGCCTGCGAGAAACTAGGCCATTTCAACCAGGATGCG
AACTATAAACTGGACAGGGCAACCGGGCTGTTGGCCAACTTCTTCTGGAA
TGTCTACGATCCGCAACGCAGACACTCCATATCCCTGTTAGAGATCAGGA
TCACCTTCATACTGCTGTGCAAGCTATATAGCAGCGATCACCTGGTGGGC
GACATCTTTGGCCTGCTGGCCGATCCCAAGTCGCAGATCATCTCCAGATA
TGCATTCGAACAGCTCCTAGCCACGCTGAGCAAGTTACTCAGCTATTTGG
GCGAGGCCAAGGCCTATGGCGTCCACAATCTTCCGTTGGCTATGGAGCAG
TGCTTTGCCCGCTGTCCGCATGGCGTTGGTGGACTGACCGAGCCGCAGTT
CCACAAACTCTGGACGGGAGCGGGTGTCCAGACGAGATTCCTGATCTATG
GCAATCTGCTGGCACTGGTGAAACGCATCGAGGACACCGAGCATTTGATT
CACAGTAATTCTTGTGCCGGCTGCCGCAAGGAGCACATTGTGGGCATACG
TTTCCGGTGTCAGGTGTGTAGGGATATATCGTTGTGCCTGCCCTGCTTTG
CAGTGGGCTTCGCTGGTGGTCGCCACGAGCCGGGTCATCGGATGTGCGAG
GTCTTCGTGGAGGATCAGCCGCCATTGCGTTGGACCCGCCACCTGGCCAG
GCTGTGCGGCTGGCTGGTGATGCCGCGCAAAACACAGGAGGAGGAGCGTC
GCGGCTTCTGTAATGCGCAGGAGAGTGGGCCCGCCTTGGGTCAATCCGCT
GCCACGCCCATTCCCGCAGAGACGCGCAGTGTGCGCAGTCAGTGCCAGGA
GAAGGACCGCACAGTTGTCCTGCAGCAACAGCAGCAGGAGCTCTGCTCCC
TGACGGGTCTAGCCAGCGAGGCGTCCAGCAGGCTGCAGTCCATCATCGAT
CGATTGCTTTTGCAAAATGCGAAGCTGGAAACCCAGCTGCAAACAGTGGC
CACCGCATCTAGTTCGGAAATATCGCAGTTTCTGAGCGCCCATCAGTGCT
TTCTGCTGCAGATTATCGAGGATATGCGACAGCTATCACATGCCTCAGCG
GTAACTTCGCCGCCACCTGCGCCAGCTGCCCAAGTGGCGCCTTCAGCTGC
GCCCCTAGTCAGCTCCACGTTCCTTAGCTCCAGCACGCCTCAGCGACAGA
TGCTATTCGACATGTATGCGCCCGTGGGTGCCAATCTCACGCACTCCATA
AATGGCGCCGACTTGAATCGCAGCTATCTGGAGGCAAACAAATCGGATTA
CTCGCTCAACGACATAAGCTTGTGGTTCGACCAGCGTCGCTCGAGTGTCC
AGCCAGGACAAGGACCTGGTTCCCTGCCGGCTCCTCTGCCGCTGCCCATG
CCGCTGGGTGCTCTACTGGAACAGCAGCCGGCAAACGGCGGAGATGGCCG
CGACACCGAGATGGTGAACTTTAAGCTGCTGCTGCACAAGGTCAAGGAGA
TCGTCGAGGACTCGTACAGCGATAATGCCGAACTGTCGGCGGCCACGCAA
AATCTGGAGAACGTTCTCGATAGCATCATCAAGAGCGAGGAGCAGCAGCG
GCGCATCAGCACGGCAAGCTTTCTAGACCAT

BO15451.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:34:25
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RA 1950 CG6157-PA 1..1947 17..1963 9735 100 Plus
dah-RB 1941 CG6157-PB 1..1938 17..1963 9565 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RA 2353 CG6157-RA 103..2049 17..1963 9735 100 Plus
dah-RB 2344 CG6157-RB 103..2040 17..1963 9565 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15329010..15329868 463..1321 4295 100 Plus
X 23542271 X 15330334..15330698 1599..1963 1825 100 Plus
X 23542271 X 15328444..15328672 17..245 1145 100 Plus
X 23542271 X 15328736..15328953 246..463 1090 100 Plus
X 23542271 X 15330112..15330271 1439..1598 800 100 Plus
X 23542271 X 15329932..15330049 1321..1438 590 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:34:24 has no hits.

BO15451.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:33:29 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 1..1950 17..1966 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:12 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 99..2045 17..1963 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:09:11 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..2049 17..1965 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:33:30 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 99..2045 17..1963 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:02 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..2049 17..1965 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:02 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
X 15328444..15328672 17..245 100 -> Plus
X 15328736..15328952 246..462 100 -> Plus
X 15329010..15329867 463..1320 100 -> Plus
X 15329932..15330049 1321..1438 100 -> Plus
X 15330112..15330271 1439..1598 100 -> Plus
X 15330334..15330698 1599..1965 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:09:11 Download gff for BO15451.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15222477..15222705 17..245 100 -> Plus
arm_X 15222769..15222985 246..462 100 -> Plus
arm_X 15223043..15223900 463..1320 100 -> Plus
arm_X 15223965..15224082 1321..1438 100 -> Plus
arm_X 15224145..15224304 1439..1598 100 -> Plus
arm_X 15224367..15224731 1599..1965 99   Plus

BO15451.pep Sequence

Translation from 16 to 1981

> BO15451.pep
MLRSSVPVQLTKLRNSAEAVASIAREKGSQGGQGQKQQVDKELSTIMDDL
QRDYGNYKYTVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLEL
MVPPFQLTSLLHDVYFACEKLGHFNQDANYKLDRATGLLANFFWNVYDPQ
RRHSISLLEIRITFILLCKLYSSDHLVGDIFGLLADPKSQIISRYAFEQL
LATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCPHGVGGLTEPQFHKLWT
GAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRCQV
CRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPPLRWTRHLARLCGWL
VMPRKTQEEERRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTV
VLQQQQQELCSLTGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSS
EISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAAQVAPSAAPLVSS
TFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDI
SLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANGGDGRDTEMV
NFKLLLHKVKEIVEDSYSDNAELSAATQNLENVLDSIIKSEEQQRRISTA
SFLDH

BO15451.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
dah-PA 649 CG6157-PA 1..649 1..649 3357 100 Plus
dah-PB 646 CG6157-PB 1..646 1..649 3328 99.5 Plus
Dys-PE 1051 CG34157-PE 445..729 53..343 218 25.9 Plus
Dys-PJ 1152 CG34157-PJ 445..729 53..343 218 25.9 Plus
Dys-PL 1323 CG34157-PL 717..1001 53..343 218 25.9 Plus