Clone BO15460 Report

Search the DGRC for BO15460

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:60
Vector:pDNR-Dual
Associated Gene/TranscriptCG32819-RA
Protein status:BO15460.pep: validated full length
Sequenced Size:1837

Clone Sequence Records

BO15460.3prime Sequence

814 bp (760 high quality bases) assembled on 2006-05-30

> BO15460.3prime
ATGGTCTAGAAAGCTTGCGTACTTGATCAGATTGCTGACCGGGAAGGAGC
GCCGGAGACTCATGCACTTCTCTCGGTCGATGAACAGGGCATTGACTTTG
TTGCGCAGATCCACCTCCAGGGTGCAGCGCGTCTTTAGTAGGCCCTGATG
GGTGGCCTCCGCCTCCATCAGCTTGTGGTGCAGCGTCTCCACGGCACCCT
GGATGTCCTGCACCTCCTGGACGAGGCGGTCCTGGGCGTGGTCCTTGCAC
AGCTCGACGCCCTCGCGGTGGGAGCGGGCCTCCAGCCGCGTCTGGGCCAC
TTTCAACGGCCCGGACTTGTCCTGGATGGCCTTCTGCAGGAGGAAGAGAT
GCTTCTCCATGTCGAACAGCTCCTGTTGGACCTTCTGAAGGTGCAGCTGC
ACCCGGTTCTTCGCCTCGGCCATCTCCTGCGAGCGGCGATCGAAGGCGTT
GTTCGTGTTGCTCCAGAAGTCCCACACGGTGGTGGCCACCGAGTTGACCA
CACTCTGGGCATCGCTCCGCAGCTGGGAAAGCTTCGCGCGCTCCGCCTGG
GAACGGCGGACGTGCTCGCTGCTGGCCTGCGCCCAGGACTCCTGGGTGCT
GACCGAGGGATCGAACTTCTCGATGCCGCCGTAGTAGGTGATGCCGCGGC
TGTGGTTGTTCAGCTGGTGGCACATGGAGTCGATGCCGAGCGAGGACTCC
TTGTGCGACACATCGTCCTCGAGGAGATGCTGGGCGCCGCGGCAGTCGAG
GGCCTGCTTCGAGATCTTCTCGTGCAGGCCGCCTAGCCGGTCACGGGAGT
TCCTTCAGTGTTGA

BO15460.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-PA 1806 CG32820-RA 1018..1803 804..19 3930 100 Minus
CG32820-PB 1563 CG32820-RB 775..1560 804..19 3930 100 Minus
CG32819-PB 1563 CG32819-RB 775..1560 804..19 3930 100 Minus
CG32819-PA 1806 CG32819-RA 1018..1803 804..19 3930 100 Minus
CG17450-PB 1806 CG17450-RB 1018..1803 804..19 3880 99.7 Minus
CG17450-PA 1563 CG17450-RA 775..1560 804..19 3880 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-RB 2034 CG32820-RB 923..1708 804..19 3930 100 Minus
CG32820-RA 2418 CG32820-RA 1307..2092 804..19 3930 100 Minus
CG32819-RA 2191 CG32819-RA 1080..1865 804..19 3930 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21612193..21612728 19..554 2680 100 Plus
X 23542271 X 21618285..21618820 19..554 2680 100 Plus
X 23542271 X 21606098..21606633 19..554 2650 99.6 Plus
X 23542271 X 21606796..21607046 554..804 1255 100 Plus
X 23542271 X 21612888..21613138 554..804 1255 100 Plus
X 23542271 X 21618980..21619230 554..804 1255 100 Plus
Blast to na_te.dros performed on 2015-02-12 18:09:11 has no hits.

BO15460.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:31 Download gff for BO15460.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32820-PA 1008..1806 16..813 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:48 Download gff for BO15460.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32819-PA 1008..1806 16..813 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:48:55 Download gff for BO15460.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32820-RB 913..1708 19..813 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:14:24 Download gff for BO15460.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32819-RA 1070..1865 19..813 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:14:24 Download gff for BO15460.3prime
Subject Subject Range Query Range Percent Splice Strand
X 21612193..21612727 19..553 100 <- Plus
X 21612888..21613145 554..813 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:48:55 Download gff for BO15460.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21483220..21483754 19..553 100 <- Plus
arm_X 21483915..21484172 554..813 98   Plus

BO15460.5prime Sequence

912 bp (791 high quality bases) assembled on 2006-05-29

> BO15460.5prime
GAAGTTATCAGTCGACATGCTCTGCTGGGCCAACGAGGATCACTATCTGA
GCCAACGCTACCCGAATCCGCAGCAAAAGGCGCCAGAAACGCTTAAGAAC
CTGCTGTTGCGATCCAGTGTACCGATAGTGGGTGCTCCGAATCCCGAGAA
GGACTCGCATTTCGCCGGCACCATGGCACCGCTCAAGGGTCAGGAGGTGC
TTAAGTTCCACAAGCACTCCTACCTCGAGAACCGCATCTTCGATCACCGC
CTGGTCAAGGACAACCTGCTGGACAAGTGGCCCACCGCTGACATGAACGA
GTACAACGAGCGCAAGGACCACCGCAACCTCATGGAGTCCTATCCATGGA
GCCAGGCGGGCGCTCCGCCCTGCATGGAGCCCGTCATGGGGCCTTCGATC
CCGCCGAGAGTTGGCGCCGCCTACGAGACGCCCACGAAGCACCCGTGGCG
CCCTGCTATGGCCTATGAGCTAATCCAGGTGAAGCATATGCCCGAGCAGC
CGGTGACCAACCAGCTGACCAAGCAGTGCTTCCTGCCCAAGGGCATGAAG
ACGGACGGCATGATATTCCCCAACTTGGTCACCGGGTTCGATCGCAATCC
ACAGCACGCCGCCCGGGCTGCCCTCTACACGCGGTACACCAGCAACGAGT
GGTACAACAACAACATGACCAAGTACTCCGAGTCGAACATGAATCGCAAC
CTCTCGGAGCGCATGCGGAATGACGCAGTGCGTCTGATGCGGGAGACGGA
CGAGAAGGCCACCTCGGGCCAGAGGGACGCCGGCCGAAGGCTGGGCGAGC
GCATCACCGACCTGACCTTCTGGCGCAACGAGCTGAACGCGGAGCTGGAG
AAACTGATCGCCGAGATGTCGGACATCAACAAGCTGCAGCGGCAGTGCGG
CAAGGCACTTCT

BO15460.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-PA 1806 CG32820-RA 1..896 17..912 4430 99.7 Plus
CG32819-PA 1806 CG32819-RA 1..896 17..912 4430 99.7 Plus
CG17450-PB 1806 CG17450-RB 1..896 17..912 4405 99.6 Plus
CG32820-PB 1563 CG32820-RB 85..653 344..912 2795 99.6 Plus
CG32819-PB 1563 CG32819-RB 85..653 344..912 2795 99.6 Plus
CG17450-PA 1563 CG17450-RA 85..653 344..912 2795 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-RA 2418 CG32820-RA 290..1185 17..912 4450 99.8 Plus
CG32819-RA 2191 CG32819-RA 63..958 17..912 4450 99.8 Plus
CG17450-RB 1995 CG17450-RB 63..958 17..912 4435 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:04:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21607507..21607859 696..344 1765 100 Minus
X 23542271 X 21613599..21613951 696..344 1765 100 Minus
X 23542271 X 21619691..21620043 696..344 1765 100 Minus
X 23542271 X 21614624..21614950 343..17 1635 100 Minus
X 23542271 X 21620716..21621042 343..17 1635 100 Minus
X 23542271 X 21608532..21608858 343..17 1620 99.7 Minus
X 23542271 X 21607168..21607384 912..696 1055 99.1 Minus
X 23542271 X 21613260..21613476 912..696 1055 99.1 Minus
X 23542271 X 21619352..21619568 912..696 1055 99.1 Minus
Blast to na_te.dros performed on 2015-02-02 08:04:05 has no hits.

BO15460.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:31 Download gff for BO15460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32820-PA 1..896 17..912 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:50 Download gff for BO15460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32819-PA 1..896 17..912 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:46:21 Download gff for BO15460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32820-RA 52..958 8..912 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:17:17 Download gff for BO15460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32819-RA 52..958 8..912 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:17:17 Download gff for BO15460.5prime
Subject Subject Range Query Range Percent Splice Strand
X 21613260..21613475 697..912 99 <- Minus
X 21613599..21613951 344..696 100 <- Minus
X 21614624..21614961 8..343 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:46:21 Download gff for BO15460.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21484287..21484502 697..912 99 <- Minus
arm_X 21484626..21484978 344..696 100 <- Minus
arm_X 21485651..21485988 8..343 99   Minus

BO15460.complete Sequence

1837 bp assembled on 2006-10-11

GenBank Submission: FJ633480

> BO15460.complete
GAAGTTATCAGTCGACATGCTCTGCTGGGCCAACGAGGATCACTATCTGA
GCCAACGCTACCCGAATCCGCAGCAAAAGGCGCCAGAAACGCTTAAGAAC
CTGCTGTTGCGATCCAGTGTACCGATAGTGGGTGCTCCGAATCCCGAGAA
GGACTCGCATTTCGCCGGCACCATGGCACCGCTCAAGGGTCAGGAGGTGC
TTAAGTTCCACAAGCACTCCTACCTCGAGAACCGCATCTTCGATCACCGC
CTGGTCAAGGACAACCTGCTGGACAAGTGGCCCACCGCTGACATGAACGA
GTACAACGAGCGCAAGGACCACCGCAACCTCATGGAGTCCTATCCATGGA
GCCAGGCGGGCGCTCCGCCCTGCATGGAGCCCGTCATGGGGCCTTCGATC
CCGCCGAGAGTTGGCGCCGCCTACGAGACGCCCACGAAGCACCCGTGGCG
CCCTGCTATGGCCTATGAGCTAATCCAGGTGAAGCATATGCCCGAGCAGC
CGGTGACCAACCAGCTGACCAAGCAGTGCTTCCTGCCCAAGGGCATGAAG
ACGGACGGCATGATATTCCCCAACTTGGTCACCGGGTTCGATCGCAATCC
ACAGCACGCCGCCCGGGCTGCCCTCTACACGCGGTACACCAGCAACGAGT
GGTACAACAACAACATGACCAAGTACTCCGAGTCGAACATGAATCGCAAC
CTCTCGGAGCGCATGCGGAATGACGCAGTGCGTCTGATGCGGGAGACGGA
CGAGAAGGCCACCTCGGGCCAGAGGGACGCCGGCCGAAGGCTGGGCGAGC
GCATCACCGACCTGACCTTCTGGCGCAACGAGCTGAACGCGGAGCTGGAG
AAGCTGATCGCCGAGATGTCGGACATCAACGAGCTGCAGCGGCAGTGCGG
CAAGGCACTTCTCGACCTGGAGATACCACTGCACATCGCCCAGGAGTGCC
TCTTTCACCGAGAGTCGCGCCAGGGCACGGAGAAGGTGCATGACATCGTG
GAGAAGGCCCTCCTCGTTGAGATCAACAACTTGAGGAACTCCCGTGACCG
GCTAGGCGGCCTGCACGAGAAGATCTCGAAGCAGGCCCTCGACTGCCGCG
GCGCCCAGCATCTCCTCGAGGACGATGTGTCGCACAAGGAGTCCTCGCTC
GGCATCGACTCCATGTGCCACCAGCTGAACAACCACAGCCGCGGCATCAC
CTACTACGGCGGCATCGAGAAGTTCGATCCCTCGGTCAGCACCCAGGAGT
CCTGGGCGCAGGCCAGCAGCGAGCACGTCCGCCGTTCCCAGGCGGAGCGC
GCGAAGCTTTCCCAGCTGCGGAGCGATGCCCAGAGTGTGGTCAACTCGGT
GGCCACCACCGTGTGGGACTTCTGGAGCAACACGAACAACGCCTTCGATC
GCCGCTCGCAGGAGATGGCCGAGGCGAAGAACCGGGTGCAGCTGCACCTT
CAGAAGGTCCAACAGGAGCTGTTCGACATGGAGAAGCATCTCTTCCTCCT
GCAGAAGGCCATCCAGGACAAGTCCGGGCCGTTGAAAGTGGCCCAGACGC
GGCTGGAGGCCCGCTCCCACCGCGAGGGCGTCGAGCTGTGCAAGGACCAC
GCCCAGGACCGCCTCGTCCAGGAGGTGCAGGACATCCAGGGTGCCGTGGA
GACGCTGCACCACAAGCTGATGGAGGCGGAGGCCACCCATCAGGGCCTAC
TAAAGACGCGCTGCACCCTGGAGGTGGATCTGCGCAACAAAGTCAATGCC
CTGTTCATCGACCGAGAGAAGTGCATGAGTCTCCGGCGCTCCTTCCCGGT
CAGCAATCTGATCAAGTACGCAAGCTTTCTAGACCAT

BO15460.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:48:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-RA 1806 CG32820-PA 1..1803 17..1819 9015 100 Plus
CG32819-RA 1806 CG32819-PA 1..1803 17..1819 9015 100 Plus
CG17450-RB 1806 CG17450-PB 1..1803 17..1819 8970 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-RA 2418 CG32820-RA 290..2092 17..1819 9015 100 Plus
CG32819-RA 2191 CG32819-RA 63..1865 17..1819 9015 100 Plus
CG17450-RB 1995 CG17450-RB 63..1865 17..1819 8970 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21606796..21607384 1284..696 2945 100 Minus
X 23542271 X 21612888..21613476 1284..696 2945 100 Minus
X 23542271 X 21618980..21619568 1284..696 2945 100 Minus
X 23542271 X 21612193..21612728 1819..1284 2680 100 Minus
X 23542271 X 21618285..21618820 1819..1284 2680 100 Minus
X 23542271 X 21606098..21606633 1819..1284 2650 99.6 Minus
X 23542271 X 21607507..21607859 696..344 1765 100 Minus
X 23542271 X 21613599..21613951 696..344 1765 100 Minus
X 23542271 X 21619691..21620043 696..344 1765 100 Minus
X 23542271 X 21614624..21614950 343..17 1635 100 Minus
X 23542271 X 21620716..21621042 343..17 1635 100 Minus
X 23542271 X 21608532..21608858 343..17 1620 99.7 Minus
Blast to na_te.dros performed on 2014-11-27 14:48:26 has no hits.

BO15460.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:32:55 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
CG32820-RA 1..1806 17..1822 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:49:58 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
CG32820-RA 52..1865 8..1819 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:33:17 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
CG32820-RA 63..1865 17..1821 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:32:55 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
CG32820-RA 52..1868 8..1822 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:53:12 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
CG32819-RA 63..1865 17..1821 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:53:12 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
X 21614624..21614950 17..343 100   Minus
X 21612190..21612727 1285..1821 99 <- Minus
X 21612888..21613475 697..1284 100 <- Minus
X 21613599..21613951 344..696 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:33:17 Download gff for BO15460.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21483217..21483754 1285..1821 99 <- Minus
arm_X 21483915..21484502 697..1284 100 <- Minus
arm_X 21484626..21484978 344..696 100 <- Minus
arm_X 21485651..21485977 17..343 100   Minus

BO15460.pep Sequence

Translation from 16 to 1837

> BO15460.pep
MLCWANEDHYLSQRYPNPQQKAPETLKNLLLRSSVPIVGAPNPEKDSHFA
GTMAPLKGQEVLKFHKHSYLENRIFDHRLVKDNLLDKWPTADMNEYNERK
DHRNLMESYPWSQAGAPPCMEPVMGPSIPPRVGAAYETPTKHPWRPAMAY
ELIQVKHMPEQPVTNQLTKQCFLPKGMKTDGMIFPNLVTGFDRNPQHAAR
AALYTRYTSNEWYNNNMTKYSESNMNRNLSERMRNDAVRLMRETDEKATS
GQRDAGRRLGERITDLTFWRNELNAELEKLIAEMSDINELQRQCGKALLD
LEIPLHIAQECLFHRESRQGTEKVHDIVEKALLVEINNLRNSRDRLGGLH
EKISKQALDCRGAQHLLEDDVSHKESSLGIDSMCHQLNNHSRGITYYGGI
EKFDPSVSTQESWAQASSEHVRRSQAERAKLSQLRSDAQSVVNSVATTVW
DFWSNTNNAFDRRSQEMAEAKNRVQLHLQKVQQELFDMEKHLFLLQKAIQ
DKSGPLKVAQTRLEARSHREGVELCKDHAQDRLVQEVQDIQGAVETLHHK
LMEAEATHQGLLKTRCTLEVDLRNKVNALFIDREKCMSLRRSFPVSNLIK
YASFLDH

BO15460.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG32820-PA 601 CG32820-PA 1..601 1..601 3170 100 Plus
CG32819-PA 601 CG32819-PA 1..601 1..601 3170 100 Plus
CG17450-PB 601 CG17450-PB 1..601 1..601 3164 99.8 Plus
CG32820-PB 520 CG32820-PB 29..520 110..601 2574 100 Plus
CG32819-PB 520 CG32819-PB 29..520 110..601 2574 100 Plus