Clone BO15464 Report

Search the DGRC for BO15464

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG7192-RA
Protein status:BO15464.pep: validated full length
Sequenced Size:1090

Clone Sequence Records

BO15464.3prime Sequence

816 bp (757 high quality bases) assembled on 2006-05-30

> BO15464.3prime
ATGGTCTAGAAAGCTTGCCTTAAAGAACGGGTTCTTAGATGCCGATGACT
TCATGGTGCACAAGATCTGACGTTCCAGCTGAAAGTCATAGTCCAGGGAC
TTGAGCAGCGTAGAGATTTCTGGCAGTGTAGGTATATCATTCACAGCTTG
GTTGCGCTGCAGCCTAACGTCCATGACGAAAGGCACTCCCTCCAGCTCGG
TGTAGGTGCCCAAGGTGCCCGTTCCGCCGTAAGTACCGTGTCCTCCGCCA
GAACCCACTCCCGCTGGCCGCGGTGGCGCCGGTCGCTGTGGCGAGTTTAT
TTGATAGTTGGCTTGGATCTCCTCATAGTCATGGTGTTCAGTCGGCGGTT
GTGGCAGTGGTCCACGTGAGTTGCGTTGACCCTGGAGATTCAGGCGGTTC
AGGGCCTGCTCCACCTCGCAAGTGGCTGGAGCTGGCAATCCTCCACCTGG
CACTGGCGGCGAAAGGCGCACTGGGATCGCGCTGGTTTTGTAGCAGATAA
GCACTCCGTTGATATCGCCGGCCAGCTTAAAGCCATCGGGCGCTGCCTTC
AACTTGGAGCAGAGTATTATGTCGGTGACCGCCTGGGTCACAGTGCCGCG
CTTGGAGAGCTTGTAGATCAACTGCCGCTTGCGCCAGGCCTTCTGGTCGC
TATCGGCAGTGCGGGAGACCTGCGAGAATTCCTTGGGCGGCGGCGTTTTA
TCCGAAATCACTTGTAGGGTCTCCACCACGTATTCCGGCAGGCCCTCGGA
CTTGGACAGGCAGAGGTAGCGTGTGTTCTGGCGTCCAAACAGGCTGTAGT
CGCGCCATAGGTCCGC

BO15464.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-PA 1059 CG7192-RA 259..1056 816..19 3990 100 Minus
CG7192-PB 1059 CG7192-RB 259..1056 816..19 3990 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 2101 CG7192-RD 467..1264 816..19 3990 100 Minus
CG7192-RB 1928 CG7192-RB 294..1091 816..19 3990 100 Minus
CG7192-RA 2126 CG7192-RA 492..1289 816..19 3990 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18098868..18099222 358..712 1775 100 Plus
X 23542271 X 18098579..18098800 136..357 1110 100 Plus
X 23542271 X 18098395..18098511 19..135 585 100 Plus
X 23542271 X 18099287..18099390 713..816 520 100 Plus
Blast to na_te.dros performed on 2015-02-06 11:00:42 has no hits.

BO15464.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:37 Download gff for BO15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 259..1059 15..816 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:57 Download gff for BO15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 259..1059 15..816 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:47:23 Download gff for BO15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 492..1296 11..816 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:30:41 Download gff for BO15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 492..1296 11..816 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:30:41 Download gff for BO15464.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18098388..18098511 11..135 96 <- Plus
X 18098579..18098800 136..357 100 <- Plus
X 18098868..18099222 358..712 100 <- Plus
X 18099287..18099390 713..816 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:47:23 Download gff for BO15464.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17992421..17992544 11..135 96 <- Plus
arm_X 17992612..17992833 136..357 100 <- Plus
arm_X 17992901..17993255 358..712 100 <- Plus
arm_X 17993320..17993423 713..816 100   Plus

BO15464.5prime Sequence

850 bp (810 high quality bases) assembled on 2006-05-29

> BO15464.5prime
GAAGTTATCAGTCGACATGAACAAAGTGGGCAAGCACATTCAAAGCGGCA
TCGGTGGAGCACCCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACT
CCGCTGGAGGCGACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATT
CAATTCCATCATGAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGC
ACATCGTCGAGGATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGC
CGCACCTACGACCAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCT
GTTTGGACGCCAGAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCC
TGCCGGAATACGTGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCG
CCGCCCAAGGAATTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAA
GGCCTGGCGCAAGCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTG
TGACCCAGGCGGTCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCG
CCCGATGGCTTTAAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTA
CAAAACCAGCGCGATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAG
GATTGCCAGCTCCAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTG
AATCTCCAGGGTCAACGCAACTCACGTGGACCACTGCCACAACCGCCGAC
TGAACACCATGACTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGC
CACAGCGACCGGCGCCACCGCGGCCAGCGGGAATGGGTTCTGGCGGAGGA

BO15464.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:36:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-PA 1059 CG7192-RA 1..834 17..850 4145 99.8 Plus
CG7192-PB 1059 CG7192-RB 1..834 17..850 4145 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 2101 CG7192-RD 209..1042 17..850 4155 99.9 Plus
CG7192-RB 1928 CG7192-RB 36..869 17..850 4155 99.9 Plus
CG7192-RA 2126 CG7192-RA 234..1067 17..850 4155 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18098868..18099222 733..379 1775 100 Minus
X 23542271 X 18099506..18099711 222..17 1030 100 Minus
X 23542271 X 18099287..18099443 378..222 785 100 Minus
X 23542271 X 18098684..18098800 850..734 570 99.1 Minus
Blast to na_te.dros performed on 2015-02-09 22:48:48 has no hits.

BO15464.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:48:38 Download gff for BO15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 1..833 17..849 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:58 Download gff for BO15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 1..833 17..849 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:37 Download gff for BO15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 230..1066 10..849 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:48:58 Download gff for BO15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 230..1066 10..849 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:48:58 Download gff for BO15464.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18098685..18098800 734..849 99 <- Minus
X 18098868..18099222 379..733 100 <- Minus
X 18099287..18099442 223..378 100 <- Minus
X 18099506..18099715 10..222 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:37 Download gff for BO15464.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17992718..17992833 734..849 99 <- Minus
arm_X 17992901..17993255 379..733 100 <- Minus
arm_X 17993320..17993475 223..378 100 <- Minus
arm_X 17993539..17993748 10..222 98   Minus

BO15464.complete Sequence

1090 bp (1090 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633481

> BO15464.complete
GAAGTTATCAGTCGACATGAACAAAGTGGGCAAGCACATTCAAAGCGGCA
TCGGTGGAGCACCCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACT
CCGCTGGAGGCGACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATT
CAATTCCATCATGAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGC
ACATCGTCGAGGATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGC
CGCACCTACGACCAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCT
GTTTGGACGCCAGAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCC
TGCCGGAATACGTGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCG
CCGCCCAAGGAATTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAA
GGCCTGGCGCAAGCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTG
TGACCCAGGCGGTCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCG
CCCGATGGCTTTAAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTA
CAAAACCAGCGCGATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAG
GATTGCCAGCTCCAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTG
AATCTCCAGGGTCAACGCAACTCACGTGGACCACTGCCACAACCGCCGAC
TGAACACCATGACTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGC
CACAGCGACCGGCGCCACCGCGGCCAGCGGGAGTGGGTTCTGGCGGAGGA
CACGGTACTTACGGCGGAACGGGCACCTTGGGCACCTACACCGAGCTGGA
GGGAGTGCCTTTCGTCATGGACGTTAGGCTGCAGCGCAACCAAGCTGTGA
ATGATATACCTACACTGCCAGAAATCTCTACGCTGCTCAAGTCCCTGGAC
TATGACTTTCAGCTGGAACGTCAGATCTTGTGCACCATGAAGTCATCGGC
ATCTAAGAACCCGTTCTTTAAGGCAAGCTTTCTAGACCAT

BO15464.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 1059 CG7192-PD 1..1056 17..1072 5280 100 Plus
CG7192-RB 1059 CG7192-PB 1..1056 17..1072 5280 100 Plus
CG7192-RA 1059 CG7192-PA 1..1056 17..1072 5280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 2101 CG7192-RD 209..1264 17..1072 5280 100 Plus
CG7192-RB 1928 CG7192-RB 36..1091 17..1072 5280 100 Plus
CG7192-RA 2126 CG7192-RA 234..1289 17..1072 5280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18098868..18099222 733..379 1775 100 Minus
X 23542271 X 18098579..18098800 955..734 1110 100 Minus
X 23542271 X 18099506..18099711 222..17 1030 100 Minus
X 23542271 X 18099287..18099443 378..222 785 100 Minus
X 23542271 X 18098395..18098511 1072..956 585 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:25:02 has no hits.

BO15464.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:39 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RB 1..1059 17..1076 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:53 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RB 32..1098 10..1080 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:40:49 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 234..1289 17..1074 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:39 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RB 32..1098 10..1080 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:10 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 234..1289 17..1074 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:10 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
X 18098868..18099222 379..733 100 <- Minus
X 18099287..18099442 223..378 100 <- Minus
X 18099506..18099711 17..222 100   Minus
X 18098393..18098511 956..1074 98 <- Minus
X 18098579..18098800 734..955 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:40:49 Download gff for BO15464.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17993320..17993475 223..378 100 <- Minus
arm_X 17992426..17992544 956..1074 98 <- Minus
arm_X 17992612..17992833 734..955 100 <- Minus
arm_X 17992901..17993255 379..733 100 <- Minus
arm_X 17993539..17993744 17..222 100   Minus

BO15464.pep Sequence

Translation from 16 to 1090

> BO15464.pep
MNKVGKHIQSGIGGAPNAALSTAALLGTPLEATNGAGSTSTTNVFNSIMS
FLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQN
TRYLCLSKSEGLPEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR
QLIYKLSKRGTVTQAVTDIILCSKLKAAPDGFKLAGDINGVLICYKTSAI
PVRLSPPVPGGGLPAPATCEVEQALNRLNLQGQRNSRGPLPQPPTEHHDY
EEIQANYQINSPQRPAPPRPAGVGSGGGHGTYGGTGTLGTYTELEGVPFV
MDVRLQRNQAVNDIPTLPEISTLLKSLDYDFQLERQILCTMKSSASKNPF
FKASFLDH

BO15464.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-PD 352 CG7192-PD 1..352 1..352 1844 100 Plus
CG7192-PB 352 CG7192-PB 1..352 1..352 1844 100 Plus
CG7192-PA 352 CG7192-PA 1..352 1..352 1844 100 Plus