Clone BO15492 Report

Search the DGRC for BO15492

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:154
Well:92
Vector:pDNR-Dual
Associated Gene/Transcriptdia-RA
Protein status:BO15492.pep: validated full length
Sequenced Size:3307

Clone Sequence Records

BO15492.3prime Sequence

720 bp (718 high quality bases) assembled on 2006-05-29

> BO15492.3prime
ATGGTCTAGAAAGCTTGCCGCGGAGCCTAGAACCTCGTTGAGGATCATTT
CGCGGGTCATTAGTTGTCCGTTGGTGACACGCGTCCGCGATCGACTCCGG
CTGAGCTGTGCCCTCCGCTCCGCTCCCGCCGGTCGTTGTCGCCGGGCCTG
TCGATTTCGTTGGCCAAAGGCTGAGCCCGTTTGCAGCGCCTCCAACAGAC
TGTCCATCACGCCTTCCTGCGTCTGCGGGGCATCCATGTCAACCACTGCC
TTCTTACGCTGTTGGCGCTCCTGTTGCTCTCGAGCAGACTGCTCTCGGGC
CTCCTGCAGACGACGCTTCTTCTCCAGCTCCTCGCGTACCCGGACATTGT
CGTTGTGGGCCGCTTGGAAGGCATCCTTGAAAGTCTTGATGTCCGCAAAG
AACTCCTCCATTGTGTATTTGCTGGGATCGAAGGCATAGTACTCGCTGAG
GTCCTTGTACAGCTTCTCCATTTGCAGCTGCATTTTGCCCAGCACGTCCA
CTTGTTGTCTGCACTCCTCGGCAAACTTGCCCATCACCTCGCTAAACTTG
TCATCATCACACTGCGGCACCTTGTTGTTCTGGAGATCAGTTTCCAGGTT
CTTAACCGCCGAATTCATTTGCCGCATGGCCTTTTGGATGGCATCCATGT
TGACCCGCGACGCTTTATTAACATGCGACAGATCGTCGTAGAAGTTTAGT
GCATCTGGGAATTTCTTTTC

BO15492.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG1768-PA 3276 dia-RA 2572..3273 720..19 3510 100 Minus
CG1768-PB 3276 dia-RB 2572..3273 720..19 3510 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RE 5260 CG1768-RE 3093..3794 720..19 3510 100 Minus
dia-RD 3797 CG1768-RD 2731..3432 720..19 3510 100 Minus
dia-RB 4465 CG1768-RB 2815..3516 720..19 3510 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20766117..20766587 489..19 2355 100 Minus
2L 23513712 2L 20765809..20766041 720..488 1165 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:37:21 has no hits.

BO15492.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:49:21 Download gff for BO15492.3prime
Subject Subject Range Query Range Percent Splice Strand
dia-PA 2572..3276 18..720 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:52:52 Download gff for BO15492.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1768-PB 2572..3276 18..720 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:12:38 Download gff for BO15492.3prime
Subject Subject Range Query Range Percent Splice Strand
dia-RB 2815..3516 19..720 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:02:42 Download gff for BO15492.3prime
Subject Subject Range Query Range Percent Splice Strand
dia-RB 2815..3516 19..720 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:02:42 Download gff for BO15492.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 20765809..20766040 489..720 100 -> Minus
2L 20766118..20766587 19..488 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:12:38 Download gff for BO15492.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20765809..20766040 489..720 100 -> Minus
arm_2L 20766118..20766587 19..488 100   Minus

BO15492.5prime Sequence

845 bp (761 high quality bases) assembled on 2006-05-29

> BO15492.5prime
GAAGTTATCAGTCGACATGTCTCGTCACGAGAAAACGAAATCCACGGGCG
GCGGGCTCCTGGACAGTCTGTTCGGAAGACCCTCGAAGTCCAAGGGAGGA
ACCATCAGCAGTGGCACCCTGGCCCATGGCGGACGACCCGTGTCCGCGGA
CAACTATGTGGTGCCGGGCGTGGAGGACTTTGAGCAGTACATCCAGCAGC
TAAGCGTTGCGGAGCTGGATGCGAAGTTTCTGGAGATCATCGAGGACATG
AACATTCCGAAGGACAAGAGGGAGCCCCTGTTGGCCAAATCGAAGGAGGA
GCGACAGAAGATGATTATGTGGCACTTGAAAGGTAAAAACTCACTGGAGC
GTAGCGCCAACTCCCGCTTCGAGAAGCCCATAGACTATGTGGAATACCTG
CAGAATGGGGAGCACAGCACGCACAAGGTGTACCAATGTGTGGAATCTCT
GCGCGTGGCGCTCACCAGCAATCCGATCTCGTGGATCAAGGAGTTTGGAG
TGGCGGGCATCGGGACGATTGAGAAGCTGCTGGCCCGGTCAAAGAATAAT
GCCAGCTACGAGAAGATCGAGTTCGAGGCGATTCGGTGCCTGAAGGCGAT
CATGAACAACACATGGGGTCTGAACGTGGTGCTCAATCCGGATCAGCATA
GTGTGGTGCTGCTGCTGGCGCAATCCCTGGATCCCCGGAAGCCGCAGACG
ATGTGTGAAGCCCTCAAGCTGCTGGCCTCGTTCTGCATTGTCTATGAGCG
GAATGGCTACGAGAAGGTTCTCCGAGCCATAACCACTATTGCAGCCACAT
CCTTTTAAGCGAGCGAGCGCTTTCGACCCATAGTGGATGCCTTGT

BO15492.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG1768-PA 3276 dia-RA 1..829 17..845 4120 99.8 Plus
CG1768-PB 3276 dia-RB 1..829 17..845 4120 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:43:49
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RE 5260 CG1768-RE 522..1350 17..845 4130 99.9 Plus
dia-RD 3797 CG1768-RD 160..988 17..845 4130 99.9 Plus
dia-RB 4465 CG1768-RB 244..1072 17..845 4130 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20763495..20764009 331..845 2560 99.8 Plus
2L 23513712 2L 20760526..20760846 17..337 1605 100 Plus
Blast to na_te.dros performed on 2015-02-09 22:43:46 has no hits.

BO15492.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:49:22 Download gff for BO15492.5prime
Subject Subject Range Query Range Percent Splice Strand
dia-PA 1..829 17..845 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:52:54 Download gff for BO15492.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1768-PB 1..829 17..845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:22:51 Download gff for BO15492.5prime
Subject Subject Range Query Range Percent Splice Strand
dia-RB 244..1072 17..845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:48:05 Download gff for BO15492.5prime
Subject Subject Range Query Range Percent Splice Strand
dia-RB 244..1072 17..845 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:48:05 Download gff for BO15492.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20760524..20760841 14..332 99 -> Plus
2L 20763497..20764009 333..845 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:22:51 Download gff for BO15492.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20760524..20760841 14..332 99 -> Plus
arm_2L 20763497..20764009 333..845 99   Plus

BO15492.complete Sequence

3307 bp assembled on 2006-10-11

GenBank Submission: FJ633494

> BO15492.complete
GAAGTTATCAGTCGACATGTCTCGTCACGAGAAAACGAAATCCACGGGCG
GCGGGCTCCTGGACAGTCTGTTCGGAAGACCCTCGAAGTCCAAGGGAGGA
ACCATCAGCAGTGGCACCCTGGCCCATGGCGGACGACCCGTGTCCGCGGA
CAACTATGTGGTGCCGGGCGTGGAGGACTTTGAGCAGTACATCCAGCAGC
TAAGCGTTGCGGAGCTGGATGCGAAGTTTCTGGAGATCATCGAGGACATG
AACATTCCGAAGGACAAGAGGGAGCCCCTGTTGGCCAAATCGAAGGAGGA
GCGACAGAAGATGATTATGTGGCACTTGAAAGGTAAAAACTCACTGGAGC
GTAGCGCCAACTCCCGCTTCGAGAAGCCCATAGACTATGTGGAATACCTG
CAGAATGGGGAGCACAGCACGCACAAGGTGTACCAATGTGTGGAATCTCT
GCGCGTGGCGCTCACCAGCAATCCGATCTCGTGGATCAAGGAGTTTGGAG
TGGCGGGCATCGGGACGATTGAGAAGCTGCTGGCCCGGTCAAAGAATAAT
GCCAGCTACGAGAAGATCGAGTTCGAGGCGATTCGGTGCCTGAAGGCGAT
CATGAACAACACATGGGGTCTGAACGTGGTGCTCAATCCGGATCAGCATA
GTGTGGTGCTGCTGCTGGCGCAATCCCTGGATCCCCGGAAGCCGCAGACG
ATGTGTGAAGCCCTCAAGCTGCTGGCCTCGTTCTGCATTGTCTATGAGCG
GAATGGCTACGAGAAGGTTCTCCGAGCCATAACCACTATTGCAGCCACAT
CCTTTAAAGCGAGCGAGCGCTTTCGACCCATAGTGGATGCCTTGTTTGCA
TCGGATCAGCAGGATCCCAAACGGGACTTGGCATGCCACAGCCTGATTTT
TATTAATACTCTCACCAATACCCCCACGGATTTGAACTTCCGCCTGCACT
TGCGATGTGAGATTATGCGCATGGGTCTATACGATCGCCTAGATGAGTTC
ACCAAAATCGTGGAGGCCAGCAATAATGAGAACCTGCAGCAGCACTTCAA
GATCTTCAACGAGATCCGCGAGGATGACTTCGAGGAGTTTGTGCAGCGCT
TCGATAATGTCACCTTCAACATGGACGACGCCACCGATTGCTTCGATGTG
CTGAAGAACCTGGTGACTGACACCACTTCCGAGCCCTACTTCCTGTCCAT
CCTGCAGCATTTGCTGTACATCAGGGATGACTTCTACTTCCGACCTGCCT
ATTATCAGCTGATTGAGGAGTGCATCTCACAAATCGTCTTCCACAAGGGT
TACTGTGATCCGAATTTCGAGAACCGGAACTTTAATATAGACACCTCGCT
ACTGCTGGACGACATTGTGGAGAAGGCCAAGGCCAAGGAGTCGAAGCGGT
CGGAGGAGTACGAGAAGAAGATCGAGCAGCTGGAGAGTGCCAAGCAAGAG
GCGGAAGCGAAGGCGGCTCATCTGGAGGAGAAAGTCAAGTTGATGGAGGC
TAATGGTGTGGCGGCTCCGTCGCCCAATAAGCTACCCAAGGTAAACATAC
CCATGCCACCGCCACCACCAGGAGGAGGAGGAGCACCTCCCCCACCGCCG
CCACCTATGCCGGGACGAGCAGGTGGTGGACCTCCGCCTCCACCACCACC
TCCCATGCCGGGAAGGGCAGGTGGACCGCCACCACCTCCTCCACCGCCCG
GAATGGGAGGCCCACCGCCTCCACCCATGCCTGGCATGATGCGCCCAGGA
GGGGGACCTCCACCACCGCCCATGATGATGGGGCCCATGGTTCCCGTTCT
GCCTCATGGCTTAAAACCGAAGAAGAAGTGGGACGTCAAGAATCCCATGA
AGCGGGCCAACTGGAAAGCCATTGTCCCGGCCAAAATGTCCGACAAGGCA
TTCTGGGTCAAGTGCCAGGAGGATAAGCTGGCCCAGGATGACTTCCTCGC
AGAACTGGCCGTGAAATTCTCTTCTAAACCTGTAAAGAAAGAACAGAAGG
ATGCGGTGGACAAGCCAACGACGCTGACAAAGAAAAATGTCGATCTTCGT
GTGCTCGACTCGAAGACTGCTCAGAACTTGGCTATTATGTTGGGAGGATC
GCTGAAGCATCTGTCCTACGAACAGATCAAGATCTGCTTGCTGCGCTGCG
ACACCGACATCCTGTCCTCCAATATCCTGCAGCAACTTATCCAGTACCTT
CCGCCGCCAGAGCACCTCAAGCGTTTGCAGGAGATCAAGGCAAAGGGCGA
ACCGCTACCGCCGATTGAACAGTTTGCAGCCACAATAGGGGAAATTAAAC
GCCTTTCGCCGCGACTTCACAACCTGAACTTCAAGCTGACCTACGCGGAC
ATGGTGCAGGATATCAAACCCGACATTGTGGCAGGAACGGCAGCATGCGA
AGAGATCCGGAATAGCAAAAAGTTCTCAAAGATCTTGGAGCTGATTCTGC
TGCTTGGAAATTACATGAACTCGGGCTCCAAAAACGAGGCCGCCTTTGGC
TTTGAGATCAGTTATTTAACCAAACTGTCCAATACGAAGGATGCGGATAA
TAAGCAGACATTGCTGCACTACCTGGCTGACCTGGTGGAAAAGAAATTCC
CAGATGCACTAAACTTCTACGACGATCTGTCGCATGTTAATAAAGCGTCG
CGGGTCAACATGGATGCCATCCAAAAGGCCATGCGGCAAATGAATTCGGC
GGTTAAGAACCTGGAAACTGATCTCCAGAACAACAAGGTGCCGCAGTGTG
ATGATGACAAGTTTAGCGAGGTGATGGGCAAGTTTGCCGAGGAGTGCAGA
CAACAAGTGGACGTGCTGGGCAAAATGCAGCTGCAAATGGAGAAGCTGTA
CAAGGACCTCAGCGAGTACTATGCCTTCGATCCCAGCAAATACACAATGG
AGGAGTTCTTTGCGGACATCAAGACTTTCAAGGATGCCTTCCAAGCGGCC
CACAACGACAATGTCCGGGTACGCGAGGAGCTGGAGAAGAAGCGTCGTCT
GCAGGAGGCCCGAGAGCAGTCTGCTCGAGAGCAACAGGAGCGCCAACAGC
GTAAGAAGGCAGTGGTTGACATGGATGCCCCGCAGACGCAGGAAGGCGTG
ATGGACAGTCTGTTGGAGGCGCTGCAAACGGGCTCAGCCTTTGGCCAACG
AAATCGACAGGCCCGGCGACAACGACCGGCGGGAGCGGAGCGGAGGGCAC
AGCTCAGCCGGAGTCGATCGCGGACGCGTGTCACCAACGGACAACTAATG
ACCCGCGAAATGATCCTCAACGAGGTTCTAGGCTCCGCGGCAAGCTTTCT
AGACCAT

BO15492.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RE 3276 CG1768-PE 1..3273 17..3289 16365 100 Plus
dia-RD 3297 CG1768-PD 22..3294 17..3289 16365 100 Plus
dia-RB 3276 CG1768-PB 1..3273 17..3289 16365 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RE 5260 CG1768-RE 522..3794 17..3289 16365 100 Plus
dia-RD 3797 CG1768-RD 160..3432 17..3289 16365 100 Plus
dia-RB 4465 CG1768-RB 244..3516 17..3289 16365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20763495..20765453 331..2289 9795 100 Plus
2L 23513712 2L 20765508..20766041 2287..2820 2670 100 Plus
2L 23513712 2L 20766117..20766587 2819..3289 2355 100 Plus
2L 23513712 2L 20760526..20760846 17..337 1605 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:57:18 has no hits.

BO15492.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:32:37 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RB 1..3276 17..3290 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:49:52 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RB 22..3294 17..3289 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:42:18 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RB 244..3516 17..3291 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:32:37 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RB 22..3294 17..3289 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:34 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RB 244..3516 17..3291 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:34 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20760526..20760841 17..332 100 -> Plus
2L 20763497..20765452 333..2288 100 -> Plus
2L 20765510..20766040 2289..2819 100 -> Plus
2L 20766118..20766587 2820..3291 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:42:18 Download gff for BO15492.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20760526..20760841 17..332 100 -> Plus
arm_2L 20763497..20765452 333..2288 100 -> Plus
arm_2L 20765510..20766040 2289..2819 100 -> Plus
arm_2L 20766118..20766587 2820..3291 99   Plus

BO15492.pep Sequence

Translation from 16 to 3307

> BO15492.pep
MSRHEKTKSTGGGLLDSLFGRPSKSKGGTISSGTLAHGGRPVSADNYVVP
GVEDFEQYIQQLSVAELDAKFLEIIEDMNIPKDKREPLLAKSKEERQKMI
MWHLKGKNSLERSANSRFEKPIDYVEYLQNGEHSTHKVYQCVESLRVALT
SNPISWIKEFGVAGIGTIEKLLARSKNNASYEKIEFEAIRCLKAIMNNTW
GLNVVLNPDQHSVVLLLAQSLDPRKPQTMCEALKLLASFCIVYERNGYEK
VLRAITTIAATSFKASERFRPIVDALFASDQQDPKRDLACHSLIFINTLT
NTPTDLNFRLHLRCEIMRMGLYDRLDEFTKIVEASNNENLQQHFKIFNEI
REDDFEEFVQRFDNVTFNMDDATDCFDVLKNLVTDTTSEPYFLSILQHLL
YIRDDFYFRPAYYQLIEECISQIVFHKGYCDPNFENRNFNIDTSLLLDDI
VEKAKAKESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAA
PSPNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGR
AGGPPPPPPPPGMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLK
PKKKWDVKNPMKRANWKAIVPAKMSDKAFWVKCQEDKLAQDDFLAELAVK
FSSKPVKKEQKDAVDKPTTLTKKNVDLRVLDSKTAQNLAIMLGGSLKHLS
YEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKAKGEPLPPI
EQFAATIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNS
KKFSKILELILLLGNYMNSGSKNEAAFGFEISYLTKLSNTKDADNKQTLL
HYLADLVEKKFPDALNFYDDLSHVNKASRVNMDAIQKAMRQMNSAVKNLE
TDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKMQLQMEKLYKDLSE
YYAFDPSKYTMEEFFADIKTFKDAFQAAHNDNVRVREELEKKRRLQEARE
QSAREQQERQQRKKAVVDMDAPQTQEGVMDSLLEALQTGSAFGQRNRQAR
RQRPAGAERRAQLSRSRSRTRVTNGQLMTREMILNEVLGSAASFLDH

BO15492.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
dia-PE 1091 CG1768-PE 1..1091 1..1091 5692 100 Plus
dia-PD 1098 CG1768-PD 8..1098 1..1091 5692 100 Plus
dia-PB 1091 CG1768-PB 1..1091 1..1091 5692 100 Plus
dia-PA 1091 CG1768-PA 1..1091 1..1091 5692 100 Plus
DAAM-PA 1114 CG14622-PA 3..1077 63..1055 803 26.6 Plus