Clone BO15513 Report

Search the DGRC for BO15513

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:155
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG40191-RA
Protein status:BO15513.pep:
Sequenced Size:1168

Clone Sequence Records

BO15513.3prime Sequence

801 bp (778 high quality bases) assembled on 2006-05-30

> BO15513.3prime
ATGGTCTAGAAAGCTTGCCTGCATTGCTTCGGTGTTGGCTTGCCAAATAA
CGGAATCATTTTCAGCCTTTTGCTCTTCTAGTTGTACGGATCTAACTGTT
ATTGAAAGGTTTCTGTTGTTTTTGTAGTCGCTGTTGGGCGATTTAATATT
TAGCCAATTCCTTGTTCCATCTTGGGCATACAATAAATCAAGTTGTGGAC
AGGTGCTTATGAATGAAAGCGTAGGTACTGATTGATGGCGCGGATGCTTA
TATTCAATTTTATTCAGTCTTGCCCTGGCGCAGCTTGTCTTCTCAAGATT
CATCAATTCAACATTCACGTTACTCGTTTTACGTAAAAGTGAGGATACTT
GGACATTAATAAAAGGTGTGGACTCTAATGCATTTGAAACGGATACCTGA
CTGCTAATTGTCATGGTGAAATCTGAGGCAGTTTCCACATCCCGATGCCA
TAACGTACCGGGAACTTGGCTCGCAATAAAAAAAGCTCCGGCTAATGTTA
TAATACTTGCCGCATAGCTTAGAGATAGTACAGACAGGCTGTTAACGAGG
AATTTCGTCCATTCAAGGCTAGGCAGCAACTGCACGAGCTCACTGTAAGT
GAGCCAACCTCTACGCAGTCCCTGCTGTTCAGCCAAAGAACGTTCAACGT
TTCTTAACTTATCAAAGAATAGCTCATTGGATATGTATATATTCCAACCC
ATAGCGGAAAGAAATTCGAGCTCGACTGCCTTGAGCCTATCTTCCGTCAT
ACAAGCGTCACTGGCCCAGTCTTCCAGATAGAACCGTTCGTCGTGGCCCG
C

BO15513.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 15:37:32 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:00:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG40191-RE 1203 CG40191-RE 95..877 801..19 3915 100 Minus
CG40191-RC 1518 CG40191-RC 597..1379 801..19 3915 100 Minus
CG40191-RD 1386 CG40191-RD 417..1199 801..19 3915 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 1265342..1266023 700..19 3410 100 Minus
2R 25286936 2R 1265192..1265294 801..699 515 100 Minus
Blast to na_te.dros performed on 2015-02-06 11:00:31 has no hits.

BO15513.3prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:47:22 Download gff for BO15513.3prime
Subject Subject Range Query Range Percent Splice Strand
CG40191-RD 417..1204 11..801 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:30:40 Download gff for BO15513.3prime
Subject Subject Range Query Range Percent Splice Strand
CG40191-RD 417..1204 11..801 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:30:40 Download gff for BO15513.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 1265192..1265293 700..801 100 -> Minus
2R 1265343..1266028 11..699 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:47:22 Download gff for BO15513.3prime
Subject Subject Range Query Range Percent Splice Strand
2RHet 391825..391926 700..801 100 -> Minus
2RHet 391976..392661 11..699 99   Minus

BO15513.5prime Sequence

819 bp (768 high quality bases) assembled on 2006-05-30

> BO15513.5prime
GAAGTTATCAGTCGACATGGGGCGATTTAAGTTATGTGCTTCGCCGAGAG
AGGTTATGAAGTACGAAGACTTTATAAAACGCATTCGAAAAAGCCTCTAC
TATGGCGTTGGAACACCAGACACAGAAATGTCGGTCTCCTTACCCTTTGC
GGAGTACGCGGCAGATTTGTTTTCGGAGACTCATCGCGGGCATTCTTTGC
ATCGCCTAAGTTGCGTATCTGCTGCACAAGTACATGCCACGCCTTGCTCT
TTAATTATGGCATTGATATACCTCGATCGCTTAAACGTCATCGACTCGGG
CTATAGCTGCAGAATCACACCACAGCAGCTGTTTGTTGTGTCACTAATGA
TTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATCTGGAAGAC
TGGGCCAGTGACGCTTGTATGACGGAAGATAGGCTCAAGGCAGTCGAGCT
CGAATTTCTTTCCGCTATGGGTTGGAATATATACATATCCAATGAGCTAT
TCTTTGATAAGTTAAGAAACGTTGAACGTTCTTTGGCTGAACAGCAGGGA
CTGCGTAGAGGTTGGCTCACTTACAGTGAGCTCGTGCAGTTGCTGCCTAG
CCTTGAATGGACGAAATTCCTCGTTAACAGCCTGTCTGTACTATCTCTAA
GCTATGCGGCAAGTATTATAACATTAGCCGGAGCTTTTTTTATTGCGAGC
CAAGTTCCCGGTACGTTATGGCATCGGGATGTGGAAACTGCCTCAGATTT
CACCATGACAATTAGCAGTCAGGTATCCGTTTCAAATGCATTAGAGTCCA
CACCTTTTATTAATGTCCA

BO15513.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 15:37:33 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG40191-RC 1518 CG40191-RC 246..1048 17..819 4015 100 Plus
CG40191-RD 1386 CG40191-RD 66..868 17..819 4015 100 Plus
CG40191-RA 2923 CG40191-RA 66..868 17..819 4015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:03:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 1265342..1265692 469..819 1755 100 Plus
2R 25286936 2R 1264546..1264841 51..346 1480 100 Plus
2R 25286936 2R 1265171..1265294 347..470 620 100 Plus
2R 25286936 2R 1264458..1264495 17..54 190 100 Plus
Blast to na_te.dros performed on 2015-02-04 02:03:05 has no hits.

BO15513.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:42:07 Download gff for BO15513.5prime
Subject Subject Range Query Range Percent Splice Strand
CG40191-RA 63..867 14..818 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:19:26 Download gff for BO15513.5prime
Subject Subject Range Query Range Percent Splice Strand
CG40191-RA 63..867 14..818 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:19:26 Download gff for BO15513.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 1264455..1264493 14..52 97 -> Plus
2R 1264548..1264841 53..346 100 -> Plus
2R 1265171..1265293 347..469 100 -> Plus
2R 1265343..1265691 470..818 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:42:07 Download gff for BO15513.5prime
Subject Subject Range Query Range Percent Splice Strand
2RHet 391088..391126 14..52 97 -> Plus
2RHet 391181..391474 53..346 100 -> Plus
2RHet 391804..391926 347..469 100 -> Plus
2RHet 391976..392324 470..818 100   Plus

BO15513.complete Sequence

1168 bp (1168 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633500

> BO15513.complete
GAAGTTATCAGTCGACATGGGGCGATTTAAGTTATGTGCTTCGCCGAGAG
AGGTTATGAAGTACGAAGACTTTATAAAACGCATTCGAAAAAGCCTCTAC
TATGGCGTTGGAACACCAGACACAGAAATGTCGGTCTCCTTACCCTTTGC
GGAGTACGCGGCAGATTTGTTTTCGGAGACTCATCGCGGGCATTCTTTGC
ATCGCCTAAGTTGCGTATCTGCTGCACAAGTACATGCCACGCCTTGCTCT
TTAATTATGGCATTGATATACCTCGATCGCTTAAACGTCATCGACTCGGG
CTATAGCTGCAGAATCACACCACAGCAGCTGTTTGTTGTGTCACTAATGA
TTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATCTGGAAGAC
TGGGCCAGTGACGCTTGTATGACGGAAGATAGGCTCAAGGCAGTCGAGCT
CGAATTTCTTTCCGCTATGGGTTGGAATATATACATATCCAATGAGCTAT
TCTTTGATAAGTTAAGAAACGTTGAACGTTCTTTGGCTGAACAGCAGGGA
CTGCGTAGAGGTTGGCTCACTTACAGTGAGCTCGTGCAGTTGCTGCCTAG
CCTTGAATGGACGAAATTCCTCGTTAACAGCCTGTCTGTACTATCTCTAA
GCTATGCGGCAAGTATTATAACATTAGCCGGAGCTTTTTTTATTGCGAGC
CAAGTTCCCGGTACGTTATGGCATCGGGATGTGGAAACTGCCTCAGATTT
CACCATGACAATTAGCAGTCAGGTATCCGTTTCAAATGCATTAGAGTCCA
CACCTTTTATTAATGTCCAAGTATCCTCACTTTTACGTAAAACGAGTAAC
GTGAATGTTGAATTGATGAATCTTGAGAAGACAAGCTGCGCCAGGGCAAG
ACTGAATAAAATTGAATATAAGCATCCGCGCCATCAATCAGTACCTACGC
TTTCATTCATAAGCACCTGTCCACAACTTGATTTATTGTATGCCCAAGAT
GGAACAAGGAATTGGCTAAATATTAAATCGCCCAACAGCGACTACAAAAA
CAACAGAAACCTTTCAATAACAGTTAGATCCGTACAACTAGAAGAGCAAA
AGGCTGAAAATGATTCCGTTATTTGGCAAGCCAACACCGAAGCAATGCAG
GCAAGCTTTCTAGACCAT

BO15513.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG40191-RC 1137 CG40191-PC 1..1134 17..1150 5670 100 Plus
CG40191-RD 1137 CG40191-PD 1..1134 17..1150 5670 100 Plus
CG40191-RA 1137 CG40191-PA 1..1134 17..1150 5670 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG40191-RC 1518 CG40191-RC 246..1379 17..1150 5670 100 Plus
CG40191-RD 1386 CG40191-RD 66..1199 17..1150 5670 100 Plus
CG40191-RA 2923 CG40191-RA 66..1199 17..1150 5670 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:59:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 1265342..1266023 469..1150 3410 100 Plus
2R 25286936 2R 1264546..1264841 51..346 1480 100 Plus
2R 25286936 2R 1265171..1265294 347..470 620 100 Plus
2R 25286936 2R 1264458..1264495 17..54 190 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:59:56 has no hits.

BO15513.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:33 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
CG40191-RD 1..1137 17..1154 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:43 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
CG40191-RD 83..1224 14..1158 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:53 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
CG40191-RA 66..1199 17..1152 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:34 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
CG40191-RD 83..1224 14..1158 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:22 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
CG40191-RA 66..1199 17..1152 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:22 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
2R 1264458..1264493 17..52 100 -> Plus
2R 1264548..1264841 53..346 100 -> Plus
2R 1265171..1265293 347..469 100 -> Plus
2R 1265343..1266023 470..1152 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:53 Download gff for BO15513.complete
Subject Subject Range Query Range Percent Splice Strand
2RHet 391091..391126 17..52 100 -> Plus
2RHet 391181..391474 53..346 100 -> Plus
2RHet 391804..391926 347..469 100 -> Plus
2RHet 391976..392656 470..1152 99   Plus

BO15513.pep Sequence

Translation from 16 to 1168

> BO15513.pep
MGRFKLCASPREVMKYEDFIKRIRKSLYYGVGTPDTEMSVSLPFAEYAAD
LFSETHRGHSLHRLSCVSAAQVHATPCSLIMALIYLDRLNVIDSGYSCRI
TPQQLFVVSLMISTKFYAGHDERFYLEDWASDACMTEDRLKAVELEFLSA
MGWNIYISNELFFDKLRNVERSLAEQQGLRRGWLTYSELVQLLPSLEWTK
FLVNSLSVLSLSYAASIITLAGAFFIASQVPGTLWHRDVETASDFTMTIS
SQVSVSNALESTPFINVQVSSLLRKTSNVNVELMNLEKTSCARARLNKIE
YKHPRHQSVPTLSFISTCPQLDLLYAQDGTRNWLNIKSPNSDYKNNRNLS
ITVRSVQLEEQKAENDSVIWQANTEAMQASFLDH

BO15513.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG40191-PC 378 CG40191-PC 1..378 1..378 1941 100 Plus
CG40191-PD 378 CG40191-PD 1..378 1..378 1941 100 Plus
CG40191-PA 378 CG40191-PA 1..378 1..378 1941 100 Plus
CG40191-PB 396 CG40191-PB 1..396 1..378 1912 95.5 Plus
CG40191-PE 268 CG40191-PE 1..268 111..378 1371 100 Plus