Clone Sequence Records
BO15517.3prime Sequence
440 bp (439 high quality bases) assembled on 2006-05-30
> BO15517.3prime
ATGGTCTAGAAAGCTTGCAGCACGCTCGCCACGGATGCGGCGCGCCAACT
GGATGTCCTTAGGCATGATTGTCACGCGCTTGGCGTGGATAGCGCACAAG
TTGGTGTCCTCGAAGAGACCCACCAGGTACGCCTCAGATGCTTCCTGCAA
GGCACCGATGGCAGCCGACTGGAAACGCAGATCGGTCTTGAAATCCTGAG
CGATTTCACGAACCAGACGCTGGAAGGGCAGCTTGCGGATGAGCAACTCG
GTCGACTTCTGGTAACGACGGATCTCACGAAGAGCCACAGTTCCGGGACG
ATAACGATGGGGCTTCTTCACTCCGCCGGTGGATGGCGCCGATTTACGGG
CAGCCTTGGTGGCTAGCTGCTTACGAGGAGCCTTTCCTCCGGTCGACTTA
CGGGCAGTCTGCTTAGTACGAGCCATGTCGACTGATAACT
BO15517.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:37:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8989-PA | 411 | His3.3B-RA | 1..408 | 426..19 | 2040 | 100 | Minus |
CG8989-PC | 411 | His3.3B-RC | 1..408 | 426..19 | 2040 | 100 | Minus |
CG8989-PB | 411 | His3.3B-RB | 1..408 | 426..19 | 2040 | 100 | Minus |
CG5825-PA | 411 | His3.3A-RA | 1..215 | 426..212 | 475 | 88.8 | Minus |
CG5825-PB | 372 | His3.3A-RB | 1..215 | 426..212 | 475 | 88.8 | Minus |
CG5825-PA | 411 | His3.3A-RA | 292..378 | 135..49 | 185 | 88.5 | Minus |
CG31613-PA | 411 | His3:CG31613-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33803-PA | 411 | His3:CG33803-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33806-PA | 411 | His3:CG33806-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33809-PA | 411 | His3:CG33809-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33848-PA | 411 | His3:CG33848-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33863-PA | 411 | His3:CG33863-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33812-PA | 411 | His3:CG33812-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33815-PA | 411 | His3:CG33815-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33833-PA | 411 | His3:CG33833-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33836-PA | 411 | His3:CG33836-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33839-PA | 411 | His3:CG33839-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33842-PA | 411 | His3:CG33842-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33845-PA | 411 | His3:CG33845-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33851-PA | 411 | His3:CG33851-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33854-PA | 411 | His3:CG33854-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33857-PA | 411 | His3:CG33857-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33860-PA | 411 | His3:CG33860-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33866-PA | 411 | His3:CG33866-RA | 187..233 | 240..194 | 185 | 95.7 | Minus |
CG33830-PA | 411 | His3:CG33830-RA | 187..230 | 240..197 | 170 | 95.4 | Minus |
CG33821-PA | 411 | His3:CG33821-RA | 187..230 | 240..197 | 170 | 95.4 | Minus |
CG33824-PA | 411 | His3:CG33824-RA | 187..230 | 240..197 | 170 | 95.4 | Minus |
CG33818-PA | 411 | His3:CG33818-RA | 187..230 | 240..197 | 170 | 95.4 | Minus |
CG33827-PA | 411 | His3:CG33827-RA | 187..230 | 240..197 | 170 | 95.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:34:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 2114 | CG8989-RE | 113..522 | 428..19 | 2050 | 100 | Minus |
His3.3B-RB | 1537 | CG8989-RB | 251..660 | 428..19 | 2050 | 100 | Minus |
His3.3B-RC | 1519 | CG8989-RC | 233..642 | 428..19 | 2050 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:34:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9154379..9154663 | 144..428 | 1425 | 100 | Plus |
2L | 23513712 | 2L | 5055259..5055541 | 426..144 | 875 | 87.3 | Minus |
2L | 23513712 | 2L | 21420186..21420593 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21425250..21425657 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21430312..21430719 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21435356..21435763 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21440244..21440651 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21454445..21454852 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21484738..21485145 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21489887..21490294 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21494932..21495339 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21499977..21500384 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21505030..21505437 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21510075..21510482 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21515119..21515526 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21520166..21520573 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21525009..21525416 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21529852..21530259 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21534693..21535100 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21541210..21541617 | 426..19 | 720 | 78.4 | Minus |
2L | 23513712 | 2L | 21459504..21459911 | 426..19 | 705 | 78.2 | Minus |
2L | 23513712 | 2L | 21464564..21464971 | 426..19 | 705 | 78.2 | Minus |
2L | 23513712 | 2L | 21469607..21470014 | 426..19 | 705 | 78.2 | Minus |
2L | 23513712 | 2L | 21474650..21475057 | 426..19 | 705 | 78.2 | Minus |
2L | 23513712 | 2L | 21479693..21480100 | 426..19 | 705 | 78.2 | Minus |
X | 23542271 | X | 9154115..9154247 | 19..151 | 650 | 99.2 | Plus |
2L | 23513712 | 2L | 21405669..21405967 | 317..19 | 565 | 79.3 | Minus |
2L | 23513712 | 2L | 5055640..5055752 | 135..23 | 355 | 87.6 | Minus |
3R | 32079331 | 3R | 1431192..1431302 | 136..26 | 210 | 79.3 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:34:05 has no hits.
BO15517.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:49:51 Download gff for
BO15517.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PB | 1..411 | 15..426 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:53:29 Download gff for
BO15517.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PA | 1..411 | 15..426 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:40:41 Download gff for
BO15517.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 228..646 | 14..433 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:01 Download gff for
BO15517.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 228..646 | 14..433 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:01 Download gff for
BO15517.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9154111..9154240 | 14..144 | 98 | <- | Plus |
X | 9154380..9154668 | 145..433 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:40:41 Download gff for
BO15517.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9048144..9048273 | 14..144 | 98 | <- | Plus |
arm_X | 9048413..9048701 | 145..433 | 98 | | Plus |
BO15517.5prime Sequence
440 bp (439 high quality bases) assembled on 2006-05-30
> BO15517.5prime
GAAGTTATCAGTCGACATGGCTCGTACTAAGCAGACTGCCCGTAAGTCGA
CCGGAGGAAAGGCTCCTCGTAAGCAGCTAGCCACCAAGGCTGCCCGTAAA
TCGGCGCCATCCACCGGCGGAGTGAAGAAGCCCCATCGTTATCGTCCCGG
AACTGTGGCTCTTCGTGAGATCCGTCGTTACCAGAAGTCGACCGAGTTGC
TCATCCGCAAGCTGCCCTTCCAGCGTCTGGTTCGTGAAATCGCTCAGGAT
TTCAAGACCGATCTGCGTTTCCAGTCGGCTGCCATCGGTGCCTTGCAGGA
AGCATCTGAGGCGTACCTGGTGGGTCTCTTCGAGGACACCAACTTGTGCG
CTATCCACGCCAAGCGCGTGACAATCATGCCTAAGGACATCCAGTTGGCG
CGCCGCATCCGTGGCGAGCGTGCTGCAAGCTTTCTAGACC
BO15517.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:37:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8989-PA | 411 | His3.3B-RA | 1..408 | 17..424 | 2040 | 100 | Plus |
CG8989-PC | 411 | His3.3B-RC | 1..408 | 17..424 | 2040 | 100 | Plus |
CG8989-PB | 411 | His3.3B-RB | 1..408 | 17..424 | 2040 | 100 | Plus |
CG5825-PA | 411 | His3.3A-RA | 1..215 | 17..231 | 475 | 88.8 | Plus |
CG5825-PB | 372 | His3.3A-RB | 1..215 | 17..231 | 475 | 88.8 | Plus |
CG5825-PA | 411 | His3.3A-RA | 292..378 | 308..394 | 185 | 88.5 | Plus |
CG31613-PA | 411 | His3:CG31613-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33803-PA | 411 | His3:CG33803-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33806-PA | 411 | His3:CG33806-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33809-PA | 411 | His3:CG33809-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33848-PA | 411 | His3:CG33848-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33863-PA | 411 | His3:CG33863-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33812-PA | 411 | His3:CG33812-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33815-PA | 411 | His3:CG33815-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33833-PA | 411 | His3:CG33833-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33836-PA | 411 | His3:CG33836-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33839-PA | 411 | His3:CG33839-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33842-PA | 411 | His3:CG33842-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33845-PA | 411 | His3:CG33845-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33851-PA | 411 | His3:CG33851-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33854-PA | 411 | His3:CG33854-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33857-PA | 411 | His3:CG33857-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33860-PA | 411 | His3:CG33860-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33866-PA | 411 | His3:CG33866-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33830-PA | 411 | His3:CG33830-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33821-PA | 411 | His3:CG33821-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33824-PA | 411 | His3:CG33824-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33818-PA | 411 | His3:CG33818-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33827-PA | 411 | His3:CG33827-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:47:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 2114 | CG8989-RE | 113..522 | 15..424 | 2050 | 100 | Plus |
His3.3B-RB | 1537 | CG8989-RB | 251..660 | 15..424 | 2050 | 100 | Plus |
His3.3B-RC | 1519 | CG8989-RC | 233..642 | 15..424 | 2050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:47:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9154379..9154663 | 299..15 | 1425 | 100 | Minus |
2L | 23513712 | 2L | 5055259..5055541 | 17..299 | 875 | 87.3 | Plus |
2L | 23513712 | 2L | 21420186..21420593 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21425250..21425657 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21430312..21430719 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21435356..21435763 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21440244..21440651 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21454445..21454852 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21484738..21485145 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21489887..21490294 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21494932..21495339 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21499977..21500384 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21505030..21505437 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21510075..21510482 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21515119..21515526 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21520166..21520573 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21525009..21525416 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21529852..21530259 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21534693..21535100 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21541210..21541617 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21459504..21459911 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21464564..21464971 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21469607..21470014 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21474650..21475057 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21479693..21480100 | 17..424 | 705 | 78.2 | Plus |
X | 23542271 | X | 9154115..9154247 | 424..292 | 650 | 99.2 | Minus |
2L | 23513712 | 2L | 21405669..21405967 | 126..424 | 565 | 79.3 | Plus |
2L | 23513712 | 2L | 5055640..5055752 | 308..420 | 355 | 87.6 | Plus |
3R | 32079331 | 3R | 1431192..1431302 | 307..417 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:47:12 has no hits.
BO15517.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:49:52 Download gff for
BO15517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PB | 1..411 | 17..428 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:53:30 Download gff for
BO15517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PA | 1..411 | 17..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:50:30 Download gff for
BO15517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 228..646 | 10..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:27 Download gff for
BO15517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 228..646 | 10..429 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:27 Download gff for
BO15517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9154111..9154240 | 299..429 | 98 | <- | Minus |
X | 9154380..9154668 | 10..298 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:50:30 Download gff for
BO15517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9048144..9048273 | 299..429 | 98 | <- | Minus |
arm_X | 9048413..9048701 | 10..298 | 98 | | Minus |
BO15517.complete Sequence
442 bp (442 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633501
> BO15517.complete
GAAGTTATCAGTCGACATGGCTCGTACTAAGCAGACTGCCCGTAAGTCGA
CCGGAGGAAAGGCTCCTCGTAAGCAGCTAGCCACCAAGGCTGCCCGTAAA
TCGGCGCCATCCACCGGCGGAGTGAAGAAGCCCCATCGTTATCGTCCCGG
AACTGTGGCTCTTCGTGAGATCCGTCGTTACCAGAAGTCGACCGAGTTGC
TCATCCGCAAGCTGCCCTTCCAGCGTCTGGTTCGTGAAATCGCTCAGGAT
TTCAAGACCGATCTGCGTTTCCAGTCGGCTGCCATCGGTGCCTTGCAGGA
AGCATCTGAGGCGTACCTGGTGGGTCTCTTCGAGGACACCAACTTGTGCG
CTATCCACGCCAAGCGCGTGACAATCATGCCTAAGGACATCCAGTTGGCG
CGCCGCATCCGTGGCGAGCGTGCTGCAAGCTTTCTAGACCAT
BO15517.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:31:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 411 | CG8989-PE | 1..408 | 17..424 | 2040 | 100 | Plus |
His3.3B-RB | 411 | CG8989-PB | 1..408 | 17..424 | 2040 | 100 | Plus |
His3.3B-RC | 411 | CG8989-PC | 1..408 | 17..424 | 2040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 2114 | CG8989-RE | 113..522 | 15..424 | 2050 | 100 | Plus |
His3.3B-RB | 1537 | CG8989-RB | 251..660 | 15..424 | 2050 | 100 | Plus |
His3.3B-RC | 1519 | CG8989-RC | 233..642 | 15..424 | 2050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:31:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9154379..9154663 | 299..15 | 1425 | 100 | Minus |
2L | 23513712 | 2L | 5055259..5055541 | 17..299 | 875 | 87.3 | Plus |
2L | 23513712 | 2L | 21420186..21420593 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21425250..21425657 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21430312..21430719 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21435356..21435763 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21440244..21440651 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21454445..21454852 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21484738..21485145 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21489887..21490294 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21494932..21495339 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21499977..21500384 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21505030..21505437 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21510075..21510482 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21515119..21515526 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21520166..21520573 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21525009..21525416 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21529852..21530259 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21534693..21535100 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21541210..21541617 | 17..424 | 720 | 78.4 | Plus |
2L | 23513712 | 2L | 21459504..21459911 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21464564..21464971 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21469607..21470014 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21474650..21475057 | 17..424 | 705 | 78.2 | Plus |
2L | 23513712 | 2L | 21479693..21480100 | 17..424 | 705 | 78.2 | Plus |
X | 23542271 | X | 9154115..9154247 | 424..292 | 650 | 99.2 | Minus |
2L | 23513712 | 2L | 21405669..21405967 | 126..424 | 565 | 79.3 | Plus |
2L | 23513712 | 2L | 5055640..5055752 | 308..420 | 355 | 87.6 | Plus |
3R | 32079331 | 3R | 1431192..1431302 | 307..417 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:31:19 has no hits.
BO15517.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:25:07 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RB | 1..411 | 17..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:45:31 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RB | 239..657 | 10..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:56 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 235..642 | 17..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:25:07 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RB | 239..657 | 10..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:27:08 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 235..642 | 17..426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:27:08 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9154113..9154240 | 299..426 | 98 | <- | Minus |
X | 9154380..9154661 | 17..298 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:56 Download gff for
BO15517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9048146..9048273 | 299..426 | 98 | <- | Minus |
arm_X | 9048413..9048694 | 17..298 | 100 | | Minus |
BO15517.pep Sequence
Translation from 16 to 442
> BO15517.pep
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERAASFLDH
BO15517.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:38:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3A-PD | 136 | CG5825-PD | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3A-PC | 136 | CG5825-PC | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3A-PA | 136 | CG5825-PA | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3B-PE | 136 | CG8989-PE | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3B-PB | 136 | CG8989-PB | 1..136 | 1..136 | 676 | 100 | Plus |