Clone Sequence Records
BO15558.3prime Sequence
299 bp (298 high quality bases) assembled on 2006-05-30
> BO15558.3prime
ATGGTCTAGAAAGCTTGCTCGAGCTGATGATGCTGCTGCACATTTCGCTT
TCGGCCGCTTGACTGATGTCGCCTCATTTGCATTTGATCGCGTTAATGAT
CGCGGCACAAAAGTGCGTTTTTTTCTCAATAGATGTATGTATCTCTCAAT
GGTCAGCCATTGGGCAGGCGCCTTGATTATGCTAATTTGTTTTGGAGCAT
CGGGTATTATCACAGCGGTCGGCCTTTCTTTCTCCTTTCTTCGCCGTTGT
CTCGGACCCTCTAAAATGGCTTTCGCATTATTCATGTCGACTGATAACT
BO15558.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:38:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7498-PA | 270 | CG7498-RA | 1..267 | 285..19 | 1335 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:26:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42445-RA | 1043 | CG42445-RA | 133..399 | 285..19 | 1335 | 100 | Minus |
| CG42445-RB | 1062 | CG42445-RB | 235..490 | 274..19 | 1280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8155325..8155580 | 19..274 | 1280 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 18:26:09 has no hits.
BO15558.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:50:58 Download gff for
BO15558.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-PA | 1..270 | 15..285 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:55:00 Download gff for
BO15558.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-PA | 1..270 | 15..285 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:58:07 Download gff for
BO15558.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 127..406 | 10..293 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:11:29 Download gff for
BO15558.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 127..406 | 10..293 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:11:29 Download gff for
BO15558.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8155318..8155587 | 10..281 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:58:07 Download gff for
BO15558.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8148418..8148687 | 10..281 | 97 | | Plus |
BO15558.5prime Sequence
299 bp (298 high quality bases) assembled on 2006-05-30
> BO15558.5prime
GAAGTTATCAGTCGACATGAATAATGCGAAAGCCATTTTAGAGGGTCCGA
GACAACGGCGAAGAAAGGAGAAAGAAAGGCCGACCGCTGTGATAATACCC
GATGCTCCAAAACAAATTAGCATAATCAAGGCGCCTGCCCAATGGCTGAC
CATTGAGAGATACATACATCTATTGAGAAAAAAACGCACTTTTGTGCCGC
GATCATTAACGCGATCAAATGCAAATGAGGCGACATCAGTCAAGCGGCCG
AAAGCGAAATGTGCAGCAGCATCATCAGCTCGAGCAAGCTTTCTAGACC
BO15558.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7498-PA | 270 | CG7498-RA | 1..267 | 17..283 | 1335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:37:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42445-RA | 1043 | CG42445-RA | 133..399 | 17..283 | 1335 | 100 | Plus |
| CG42445-RB | 1062 | CG42445-RB | 235..490 | 28..283 | 1280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:37:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8155325..8155580 | 283..28 | 1280 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:37:42 has no hits.
BO15558.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:50:59 Download gff for
BO15558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-PA | 1..270 | 17..287 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:55:02 Download gff for
BO15558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-PA | 1..270 | 17..287 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 07:47:19 Download gff for
BO15558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 127..406 | 9..292 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:15:04 Download gff for
BO15558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 127..406 | 9..292 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:15:04 Download gff for
BO15558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8155318..8155587 | 21..292 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 07:47:19 Download gff for
BO15558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8148418..8148687 | 21..292 | 97 | | Minus |
BO15558.complete Sequence
301 bp (301 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633505
> BO15558.complete
GAAGTTATCAGTCGACATGAATAATGCGAAAGCCATTTTAGAGGGTCCGA
GACAACGGCGAAGAAAGGAGAAAGAAAGGCCGACCGCTGTGATAATACCC
GATGCTCCAAAACAAATTAGCATAATCAAGGCGCCTGCCCAATGGCTGAC
CATTGAGAGATACATACATCTATTGAGAAAAAAACGCACTTTTGTGCCGC
GATCATTAACGCGATCAAATGCAAATGAGGCGACATCAGTCAAGCGGCCG
AAAGCGAAATGTGCAGCAGCATCATCAGCTCGAGCAAGCTTTCTAGACCA
T
BO15558.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:30:48 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42445-RA | 1043 | CG42445-RA | 133..399 | 17..283 | 1335 | 100 | Plus |
| CG42445-RB | 1062 | CG42445-RB | 235..490 | 28..283 | 1280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8155325..8155580 | 283..28 | 1280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:30:47 has no hits.
BO15558.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:18 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-RA | 1..270 | 17..287 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:23 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 121..400 | 9..292 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:39:33 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 133..399 | 17..285 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:20 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-RA | 99..378 | 9..292 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:23:46 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 133..399 | 17..285 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:23:46 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8155323..8155587 | 21..285 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:39:33 Download gff for
BO15558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8148423..8148687 | 21..285 | 97 | | Minus |
BO15558.pep Sequence
Translation from 16 to 301
> BO15558.pep
MNNAKAILEGPRQRRRKEKERPTAVIIPDAPKQISIIKAPAQWLTIERYI
HLLRKKRTFVPRSLTRSNANEATSVKRPKAKCAAASSARASFLDH
Sequence BO15558.pep has no blast hits.
