Clone Sequence Records
BO15570.complete Sequence
2116 bp assembled on 2009-10-20
GenBank Submission: KX799748
> BO15570.complete
GAAGTTATCAGTCGACATGAGACACAATCGACTGAAGGTCCTGATCCTGG
GACTCGTCCTCCTGCTGACATCTTGTCGAGCGGATGGACCGCTGCACAGT
GCGGATCACGGCATGGGCGGAATGGGCATGGGTGGTCACGGCCTGGACGC
GAGTCCCGCACCCGGTTACGGAGTGCCAGTCATACCCAAGGATCCCAATC
TGCGATGCGAGGAGATCACCATACCAATGTGTCGGGGCATTGGCTACAAC
ATGACATCCTTCCCCAACGAAATGAACCATGAGACCCAGGACGAAGCGGG
CCTGGAGGTGCACCAGTTCTGGCCCCTGGTGGAGATCAAATGCTCGCCGG
ACCTCAAGTTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTGGAGGAT
TACCACAAGCCGCTGCCCGTTTGCCGGAGTGTCTGCGAGAGAGCCCGCTC
GGGATGCGCACCCATCATGCAGCAGTACAGCTTCGAATGGCCGGAGAGAA
TGGCGTGCGAGCACTTGCCTCTTCATGGTGACCCCGACAATCTGTGCATG
GAACAGCCCTCGTACACGGAGGCTGGCAGCGGTGGCAGCTCGGGCGGATC
GGGTGGCTCTGGCAGCGGTTCCGGCTCCGGCGGCAAACGGAAGCAAGGAG
GCAGTGGCTCGGGCGGCAGTGGGGCCGGCGGCAGCAGCGGTTCCACCTCA
ACGAAGCCGTGCCGCGGACGCAATTCAAAAAACTGCCAAAATCCCCAAGG
AGAAAAGGCAAGCGGAAAAGAGTGCAGCTGCTCGTGCCGCTCCCCACTCA
TCTTCCTGGGGAAGGAGCAGCTGCTGCAGCAGCAGTCGCAGATGCCCATG
ATGCACCATCCACACCACTGGTACATGAACCTCACTGTCCAAAGGATCGC
CGGCGTTCCAAACTGCGGCATACCGTGCAAGGGGCCCTTCTTCAGCAACG
ACGAAAAGGATTTCGCCGGCCTCTGGATCGCCCTGTGGTCGGGACTGTGC
TTCTGCAGCACGCTCATGACCCTAACCACATTCATCATCGACACCGAAAG
GTTTAAGTACCCGGAGCGGCCCATTGTCTTCCTCTCCGCCTGCTACTTCA
TGGTGGCAGTGGGCTACCTGTCGCGCAACTTCCTGCAGAACGAGGAGATC
GCCTGCGACGGCCTGCTGCTCCGGGAAAGCTCCACGGGTCCGCACTCGTG
CACCCTGGTCTTCCTGCTTACCTACTTCTTTGGCATGGCCTCGTCCATCT
GGTGGGTGATCCTCAGTTTCACCTGGTTCCTGGCCGCTGGTCTGAAGTGG
GGCAATGAGGCCATCACCAAGCACTCGCAGTACTTCCACCTGGCCGCCTG
GTTGATTCCCACTGTCCAGTCCGTGGCCGTACTCCTGCTCTCGGCGGTGG
ATGGCGATCCCATTCTGGGCATCTGCTATGTGGGCAACCTCAATCCGGAT
CACCTAAAGACCTTTGTGCTGGCCCCGCTCTTCGTTTACCTCGTAATCGG
CACCACCTTCCTGATGGCCGGCTTTGTGTCCCTCTTCCGCATCCGCTCGG
TTATCAAGCAACAGGGCGGTGTAGGAGCTGGTGTCAAGGCGGACAAGCTG
GAGAAACTGATGATCAGGATTGGCATCTTCTCGGTGCTCTACACGGTGCC
GGCCACCATAGTTATCGGATGTTACCTGTACGAAGCAGCCTACTTTGAGG
ACTGGATCAAGGCCCTGGCCTGTCCATGCGCCCAGGTGAAGGGTCCCGGC
AAGAAGCCTCTCTACTCGGTCCTGATGCTCAAGTACTTCATGGCCCTGGC
CGTGGGCATCACCTCGGGCGTGTGGATCTGGTCTGGCAAGACGCTGGAGA
GCTGGCGACGCTTCTGGCGGAGACTCCTAGGAGCGCCGGACCGCACGGGC
GCCAACCAGGCGCTGATCAAGCAGCGGCCTCCGATCCCGCATCCCTATGC
CGGATCTGGAATGGGAATGCCCGTGGGCTCGGCGGCGGGCTCCCTGCTGG
CCACGCCCTACACCCAGGCGGGCGGAGCCTCGGTGGCCTCCACCAGCCAC
CACCACCTGCACCACCACGTTCTCAAGCAGCCGGCGGCCAGCCACGTAGC
AAGCTTTCTAGACCAT
BO15570.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 2085 | CG9739-PG | 1..2082 | 17..2098 | 10410 | 100 | Plus |
| fz2-RF | 2421 | CG9739-PF | 1..2082 | 17..2098 | 10410 | 100 | Plus |
| fz2-RE | 2085 | CG9739-PE | 1..2082 | 17..2098 | 10410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:07:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 385..2466 | 17..2098 | 10410 | 100 | Plus |
| fz2-RF | 4448 | CG9739-RF | 1060..3141 | 17..2098 | 10410 | 100 | Plus |
| fz2-RE | 4345 | CG9739-RE | 957..3038 | 17..2098 | 10410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19144205..19146286 | 2098..17 | 10410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:07:09 has no hits.
BO15570.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-20 10:49:44 Download gff for
BO15570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RC | 1055..3136 | 17..2100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:47 Download gff for
BO15570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 957..3038 | 17..2100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:25 Download gff for
BO15570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 957..3038 | 17..2100 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:25 Download gff for
BO15570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19144201..19146286 | 17..2100 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:47 Download gff for
BO15570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19137301..19139386 | 17..2100 | 99 | | Minus |
BO15570.3prime Sequence
803 bp (695 high quality bases) assembled on 2006-05-30
> BO15570.3prime
ATGGTCTAGAAAGCTTGCTACGTGGCTGGCCGCCGGCTGCTTGAGAACGT
GGTGGTGCAGGTGGTGGTGGCTGGTGGAGGCCACCGAGGCTCCGCCCGCC
TGGGTGTAGGGCGTGGCCAGCAGGGAGCCCGCCGCCGAGCCCACGGGCAT
TCCCATTCCAGATCCGGCATAGGGATGCGGGATCGGAGGCCGCTGCTTGA
TCAGCGCCTGGTTGGCGCCCGTGCGGTCCGGCGCTCCTAGGAGTCTCCGC
CAGAAGCGTCGCCAGCTCTCCAGCGTCTTGCCAGACCAGATCCACACGCC
CGAGGTGATGCCCACGGCCAGGGCCATGAAGTACTTGAGCATCAGGACCG
AGTAGAGAGGCTTCTTGCCGGGACCCTTCACCTGGGCGCATGGACAGGCC
AGGGCCTTGATCCAGTCCTCAAAGTAGGCTGCTTCGTACAGGTAACATCC
GATAACTATGGTGGCCGGCACCGTGTAGAGCACCGAGAAGATGCCAATCC
TGATCATCAGTTTCTCCAGCTTGTCCGCCTTGACACCAGCTCCTACACCG
CCCTGTTGCTTGATAACCGAGCGGATGCGGAAGAGGGACACAAAGCCGGC
CATCAGGAAGGTGGTGCCGATTACGAGGTAAACGAAGAGCGGGGCCAGCA
CAAAGGTCTTTAGGTGATCCGGATTGAGGTTGCCCACATAGCAGATGCCC
AGAATGGGATCGCCATCCACCGCCGAGAGCAGGAGTACGGCCACGGACTG
GACAGTGGGAATCAACCAGGCGGCCAGGTGGAAGTACTGCGAGTGCTTGG
TGA
BO15570.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:38:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9739-PB | 2085 | fz2-RB | 1298..2082 | 803..19 | 3925 | 100 | Minus |
| CG9739-PA | 2085 | fz2-RA | 1298..2082 | 803..19 | 3925 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:56:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 1682..2466 | 803..19 | 3925 | 100 | Minus |
| fz2-RF | 4448 | CG9739-RF | 2357..3141 | 803..19 | 3925 | 100 | Minus |
| fz2-RE | 4345 | CG9739-RE | 2254..3038 | 803..19 | 3925 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:55:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19144205..19144989 | 19..803 | 3925 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 14:56:00 has no hits.
BO15570.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:51:16 Download gff for
BO15570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-PB | 1299..2085 | 16..802 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:55:24 Download gff for
BO15570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9739-PA | 1299..2085 | 16..802 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:31:28 Download gff for
BO15570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 2255..3038 | 19..802 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:48:08 Download gff for
BO15570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 2255..3038 | 19..802 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:48:08 Download gff for
BO15570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19144205..19144988 | 19..802 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:31:28 Download gff for
BO15570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19137305..19138088 | 19..802 | 100 | | Plus |
BO15570.5prime Sequence
828 bp (724 high quality bases) assembled on 2006-05-30
> BO15570.5prime
GAAGTTATCAGTCGACATGAGACACAATCGACTGAAGGTCCTGATCCTGG
GACTCGTCCTCCTGCTGACATCTTGTCGAGCGGATGGACCGCTGCACAGT
GCGGATCACGGCATGGGCGGAATGGGCATGGGTGGTCACGGCCTGGACGC
GAGTCCCGCACCCGGTTACGGAGTGCCAGTCATACCCAAGGATCCCAATC
TGCGATGCGAGGAGATCACCATACCAATGTGTCGGGGCATTGGCTACAAC
ATGACATCCTTCCCCAACGAAATGAACCATGAGACCCAGGACGAAGCGGG
CCTGGAGGTGCACCAGTTCTGGCCCCTGGTGGAGATCAAATGCTCGCCGG
ACCTCAAGTTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTGGAGGAT
TACCACAAGCCGCTGCCCGTTTGCCGGAGTGTCTGCGAGAGAGCCCGCTC
GGGATGCGCACCCATCATGCAGCAGTACAGCTTCGAATGGCCGGAGAGAA
TGGCGTGCGAGCACTTGCCTCTTCATGGTGACCCCGACAATCTGTGCATG
GAACAGCCCTCGTACACGGAGGCTGGCAGCGGTGGCAGCTCGGGCGGATC
GGGTGGCTCTGGCAGCGGTTCCGGCTCCGGCGGCAAACGGAAGCAAGGAG
GCAGTGGCTCGGGCGGCAGTGGGGCCGGCGGCAGCAGCGGTTCCCCCTCA
ACGAAGCCGTGCCGCGGACGCAATTCAAAAAACTGCCAAAATCCCCAGGA
GAAAAGGCAAGCGGAAAAGAGTGCAGCTGCTCGTGCCGCTCCCCACTCAT
CTTCCTGGGAAAGGAGCAGCTGCTGCAG
BO15570.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9739-PB | 2085 | fz2-RB | 1..731 | 17..747 | 3630 | 99.8 | Plus |
| CG9739-PA | 2085 | fz2-RA | 1..731 | 17..747 | 3630 | 99.8 | Plus |
| CG9739-PB | 2085 | fz2-RB | 732..813 | 747..828 | 385 | 98.7 | Plus |
| CG9739-PA | 2085 | fz2-RA | 732..813 | 747..828 | 385 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:12:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 385..1197 | 17..828 | 4010 | 99.6 | Plus |
| fz2-RF | 4448 | CG9739-RF | 1060..1872 | 17..828 | 4010 | 99.6 | Plus |
| fz2-RE | 4345 | CG9739-RE | 957..1769 | 17..828 | 4010 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:12:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19145474..19146286 | 828..17 | 3985 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:12:08 has no hits.
BO15570.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:51:17 Download gff for
BO15570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-PB | 1..813 | 17..828 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:55:25 Download gff for
BO15570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9739-PA | 1..813 | 17..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:57:34 Download gff for
BO15570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 951..1769 | 9..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:56:59 Download gff for
BO15570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 951..1769 | 9..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:56:59 Download gff for
BO15570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19145474..19146292 | 9..828 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:57:34 Download gff for
BO15570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19138574..19139392 | 9..828 | 99 | | Minus |
BO15570.pep Sequence
Translation from 16 to 2116
> BO15570.pep
MRHNRLKVLILGLVLLLTSCRADGPLHSADHGMGGMGMGGHGLDASPAPG
YGVPVIPKDPNLRCEEITIPMCRGIGYNMTSFPNEMNHETQDEAGLEVHQ
FWPLVEIKCSPDLKFFLCSMYTPICLEDYHKPLPVCRSVCERARSGCAPI
MQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSGS
GSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKASG
KECSCSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNC
GIPCKGPFFSNDEKDFAGLWIALWSGLCFCSTLMTLTTFIIDTERFKYPE
RPIVFLSACYFMVAVGYLSRNFLQNEEIACDGLLLRESSTGPHSCTLVFL
LTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFHLAAWLIPTV
QSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLM
AGFVSLFRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVI
GCYLYEAAYFEDWIKALACPCAQVKGPGKKPLYSVLMLKYFMALAVGITS
GVWIWSGKTLESWRRFWRRLLGAPDRTGANQALIKQRPPIPHPYAGSGMG
MPVGSAAGSLLATPYTQAGGASVASTSHHHLHHHVLKQPAASHVASFLDH
BO15570.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-PG | 694 | CG9739-PG | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PF | 806 | CG9739-PF | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PE | 694 | CG9739-PE | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PD | 694 | CG9739-PD | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PC | 694 | CG9739-PC | 1..694 | 1..694 | 3769 | 100 | Plus |
