Clone BO15571 Report

Search the DGRC for BO15571

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:155
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptCG12325-RA
Protein status:BO15571.pep: Imported from assembly
Sequenced Size:2881

Clone Sequence Records

BO15571.complete Sequence

2881 bp assembled on 2010-04-13

GenBank Submission: KX796567

> BO15571.complete
GAAGTTATCAGTCGACATGAAGTTTTCCTACAAATTTTCCAACCTGTTGG
GCACAATATATCGTAATGGAAACTTGGTGTTCACACCGGATGGCAATTCC
GTTATCAGTCCGGTTGGCAATAGGATAACGGTCTACGATTTAAAAAACAA
CAAATCGCGCACCTTGTCCCTGGAATCGCGGTATAACTACACGAACATAG
CTCTTTCCCCGGATGGAAGTCTGCTCATCGCAGTCAATGAAAAGGGTGAG
GCGCAGCTCATCAGCATGATGTCCTGTACGGTGATACATCGTCACAAGTT
CCAGACGGGCGTACAGTGCATCTGCTTCAGTCCAAATGGAGCATTCTTTG
CCGTCGCTGTGCAGAACGTAGTGTTGATATTCTGTGCACCTGGTGAGATC
ACAGGGGAGTACAATCCTTTCGTCCTGCGCCGAAGATTCCTAGGTGGATT
CGACGATGTCACTTGGCTGGACTGGTCTTCGGACTCTCGACTTTTGGCAA
TCGGCTGTCGGGATAGCTCCACCAAAATCGTTGCCATCAACTATACAAAG
AACTTCCGCACCTATAACCTAAGTGGCCACACAGACGCCATTGTAGCTTG
TTTTTTCGAGGCAAACAGCTTGCACTTGAACACCATAAGCCGCAATGGTC
AGCTCTGCTTGTGGGAATGCAGCCTAGCTCCCTCGGATTTAGAGGATGCT
GAAAGGCCAAAAATCGCTCCCCCTCAAAGGAAGAAGGAAAAGAAGGCAGT
ATCTGACAATGAGTCAGAAGATGACGTTGAAAATGTAGTGGAAAAGGATG
CGTTGAAGGAGGAATCTACCAAGGAAGCCGAAGATGTCAACCATATAAAA
AATGAGGACGAGACGAAGAGTCACCCCTTCTTTTACAAAAAAATAACTCG
TCATTACTTGGCCGATGAGCCGCGAAAAGAACAGCGGGATGTACAACTGA
CCGCGGCAAACTACAACACTCGTACCAAGGTTTTGGTGGTAGCCTTCAGT
TCCGGAGCTTTCTACCTCTACGAATTGCCCGACGTCAACATGATTCATTC
GCTGAGCATTTCCGACTATCCTATTTCGGCGGCTCTCTTCAACTGCACTG
GTGACTGGGTCGCATTGGCCTCCCGAGAGATTGGCCAACTTCTGGTTTGG
GAGTGGCAAAGCGAGCAATACATAATGAAGCAGCAGGGACACAGCAGCGA
AATGACCTGCATTGCTTACTCCTCGGATGGTCAGTTCATCGCCACTGGCG
GCGAAGACTCCAAGGTGAAGCTCTGGAACACGCAGAGCAGTTTCTGTTTT
GTTACTTTCAGCGAGCACACCAGTGGAGTTACTGGCATACAGTTCAGCAG
GAACAAGAAGTTCCTGGTTAGCAGTTCCCTAGACGGCACAGTGCGTGCTT
TTGATGTCAACAGATACCGCAACTTCAGGACTTTCACCTCACCGAATCCT
GCTCAGTTCTCCTGTGTAGCTGTGGATTACTCTGGCGAGTTAGTTGTGGC
TGGCGGCCAGGACGTATTCGATATCTTCCTGTGGTCAGTTAAAACAGGAA
AGCTGCTGGAGATCATCAGTGGCCATGAGGGACCCGTAGTTTCCATTGCA
TTCTCACCAGTGGCTACTTCATCAACTTTGGTGTCTGGTTCTTGGGACAA
GACCGTCAAGATATGGAACTGCCTGGAGAGCAACAGCGAGCACGAAACTA
TTGATGCTGTTTCAGATGTTACAAATGTTACTTTCAGTCCTAGTGGTGAA
GAGATTGCTGTGGCCACTCTCAGTGGTAATATAACAATTTTCGACATCAA
ATCTGCTGGCCAAGTTACTACTATAGAGGGTCGCAATGATCTGAGCGCAG
GGCGCCTGGAAACCGATATTATAACAGCGAGGAAAAATGCTCAGGCAAAC
TATTTTTCCACCATTGAGTACTCAGCGGATGGAGAGTGCATACTGGCGGC
TGGAAAGTCTGCAAACATATGCATTTACCATGTTAGGGAGGCAATACTTT
TGAAGAAATTTGAGATCACACAAAACCACAGCTTAGATGGCCTTAATGAC
TTTATCAGTCGAAAACATTTAAGTGAATTTGGCAACATGGCTCTTGTGGA
AGAACGAGAAGAGCTGGAGGGCGGCAGGGTGGCTATTCGATTGCCGGGCG
TACAACGGGGAGACATGTCATCCAGGAGATTCCAGCAAGAGGTTAGGGTG
TTCTCCGTAAAGTTCTCACCCACAGGCCAGGCATTTGCGGCTGCTGGCAC
TGAAGGACTATGCATATACGCCTTAGATAAGGGTGTTGTCTTCGATCCCT
TTGATCTCTCGCTGGAAGTTACGCCGAAAGCGGTCCACGAGTCCCTCAAG
CAGCAGAATTACACCAAGGCGTTGGTCATGTCCCTCAAGCTAAACGAGCC
CAATTTGATTGCCCTAGTGCTGGAGCGAGTGCCGTATAAGGACGTCGAAC
TGGTTTGTGCGGATCTGTCGCCGGAGTTTGCCCAGCGACTGTTGCAACAA
TTGGCCCGTCAGCTCCAGTCCACGCCACACATAGAGTTCTATCTGCAATG
GAGCTGCTGTCTGCTGACCAAACACGGAAACCAAGATGGAGTCTTTCAGC
ACACGGGCTTGCTGGCACTGCACGAGGTTCTTTCGAGGAAATACGAAATG
CTTAACAAAATCTGCGACTACAACAAGTACACGTTGAAAGTACTCCTGGA
TAGAGCTGATAAGTTGGAGCAGAAAAACGAGGGCAAACCCAATGCGACGG
AGGAAGATAGTGATGAGGAAATGCTACTTATCAGGTCGAAGGACGACGAA
AATGGACAGGCGCAGTTTAGCGATGAGGAGGAGAGCGACAGCGGATCCGA
AGAAGAGATGGCTGCAAGCTTTCTAGACCAT

BO15571.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-RB 2850 CG12325-PB 1..2847 17..2863 14235 100 Plus
CG12325-RA 2850 CG12325-PA 1..2847 17..2863 14235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-RB 3410 CG12325-RB 296..3142 17..2863 14235 100 Plus
CG12325-RA 3220 CG12325-RA 106..2952 17..2863 14235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:58:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10823939..10825204 148..1413 6330 100 Plus
2R 25286936 2R 10825260..10825602 1411..1753 1715 100 Plus
2R 25286936 2R 10826080..10826316 2048..2284 1185 100 Plus
2R 25286936 2R 10826897..10827114 2444..2661 1090 100 Plus
2R 25286936 2R 10827175..10827376 2662..2863 1010 100 Plus
2R 25286936 2R 10826378..10826540 2282..2444 815 100 Plus
2R 25286936 2R 10825871..10826019 1900..2048 745 100 Plus
2R 25286936 2R 10825666..10825813 1752..1899 740 100 Plus
2R 25286936 2R 10823771..10823883 35..147 565 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:58:36 has no hits.

BO15571.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:16 Download gff for BO15571.complete
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 101..2947 17..2865 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:27 Download gff for BO15571.complete
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 106..2952 17..2865 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:52 Download gff for BO15571.complete
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 106..2952 17..2865 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:52 Download gff for BO15571.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10826898..10827114 2445..2661 100 -> Plus
2R 10827175..10827376 2662..2865 99   Plus
2R 10823700..10823717 17..34 100 -> Plus
2R 10823771..10823883 35..147 100 -> Plus
2R 10823939..10825204 148..1413 100 -> Plus
2R 10825263..10825602 1414..1753 100 -> Plus
2R 10825668..10825813 1754..1899 100 -> Plus
2R 10825871..10826018 1900..2047 100 -> Plus
2R 10826080..10826314 2048..2282 100 -> Plus
2R 10826379..10826540 2283..2444 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:27 Download gff for BO15571.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6713173..6713318 1754..1899 100 -> Plus
arm_2R 6713376..6713523 1900..2047 100 -> Plus
arm_2R 6712768..6713107 1414..1753 100 -> Plus
arm_2R 6711205..6711222 17..34 100 -> Plus
arm_2R 6711276..6711388 35..147 100 -> Plus
arm_2R 6711444..6712709 148..1413 100 -> Plus
arm_2R 6714403..6714619 2445..2661 100 -> Plus
arm_2R 6713585..6713819 2048..2282 100 -> Plus
arm_2R 6713884..6714045 2283..2444 100 -> Plus
arm_2R 6714680..6714881 2662..2865 99   Plus

BO15571.3prime Sequence

862 bp (804 high quality bases) assembled on 2006-05-30

> BO15571.3prime
CTTAAAGGGCGCGCCAAANGAATGGTCTAGAAAGCTTGCAGCCTTTTCTT
CTTCGGATCCGCTGTCGCTCTCCTCCTCATCGCTAAACTGCGCCTGTCCA
TTTTCGTCGTCCTTCCACCTGATAAGTAGCATTTCCTCATCACTATCTTC
CTCCGTCGCATTGGGTTTGCCCTCGTTTTTCTGCTCCAACTTATCAGCTC
TATCCAGGAGTACTTTCAACGTGTACTTGTTGTAGTCGCAGATTTTGTTA
AGCATTTCGTATTTCCTCGAAAGAACCTCGTGCAGTGCCAGCAAGCCCGT
GTGCTGAAAGACTCCATCTTGGTTTCCGTGTTTGGTCAGCAGACAGCAGC
TCCATTGCAGATAGAACTCTATGTGTGGCGTGGACTGGAGCTGACGGGCC
AATTGTTGCAACAGTCGCTGGGCAAACTCCGGCGACAGATCCGCACAAAC
CAGTTCGACGTCCTTATACGGCACTCGCTCCAGCACTAGGGCAATCAAAT
TGGGCTCGTTTAGCTTGAGGGACATGACCAACGCCTTGGTGTAATTCTGC
TGCTTGAGGGACTCGTGGACCGCTTTCGGCGTAACTTCCAGCGAGAGATC
AAAGGGATCGAAGACAACACCCTTATCTAAGGCGTATATGCATAGTCCTT
CAGTGCCAGCAGCCGCAAATGCCTGGCCTGTGGGTGAGAACTTTACGGAG
AACACCCTAACCTCTTGCTGGAATCTCCTGGATGACATGTCTCCCCGGTT
GTACGCCCGGCAATCGAATAGCCACCCTGCCGCCCTCCAGCTCTTCTCGT
TCTTCCACAAGAGCCATGTTGCCAAATTCACTTAAATGTTTTCAACTGAT
AAAATCATTAAA

BO15571.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-PA 2850 CG12325-RA 2140..2840 747..47 3480 99.8 Minus
CG12325-PA 2850 CG12325-RA 2027..2140 861..748 520 98.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-RB 3410 CG12325-RB 2322..3142 861..40 4010 99.3 Minus
CG12325-RA 3220 CG12325-RA 2132..2952 861..40 4010 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:00:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10826083..10826316 853..619 1110 99.1 Minus
2R 25286936 2R 10826897..10827114 459..242 1090 100 Minus
2R 25286936 2R 10827175..10827376 241..40 965 98.5 Minus
2R 25286936 2R 10826378..10826540 621..459 815 100 Minus
Blast to na_te.dros performed on 2015-02-11 18:00:22 has no hits.

BO15571.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:51:18 Download gff for BO15571.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-PA 2029..2850 37..859 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:55:27 Download gff for BO15571.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-PA 2029..2850 37..859 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:28:01 Download gff for BO15571.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 2134..2956 36..859 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:31:30 Download gff for BO15571.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 2134..2956 36..859 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:31:30 Download gff for BO15571.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 10827175..10827380 36..241 97   Minus
2R 10826076..10826314 621..859 97 -> Minus
2R 10826379..10826540 459..620 100 -> Minus
2R 10826898..10827114 242..458 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:28:01 Download gff for BO15571.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6713581..6713819 621..859 97 -> Minus
arm_2R 6713884..6714045 459..620 100 -> Minus
arm_2R 6714403..6714619 242..458 100 -> Minus
arm_2R 6714680..6714885 36..241 97   Minus

BO15571.5prime Sequence

834 bp (764 high quality bases) assembled on 2006-05-30

> BO15571.5prime
GAAGTTATCAGTCGACATGAAGTTTTCCTACAAATTTTCCAACCTGTTGG
GCACAATATATCGTAATGGAAACTTGGTGTTCACACCGGATGGCAATTCC
GTTATCAGTCCGGTTGGCAATAGGATAACGGTCTACGATTTAAAAAACAA
CAAATCGCGCACCTTGTCCCTGGAATCGCGGTATAACTACACGAACATAG
CTCTTTCCCCGGATGGAAGTCTGCTCATCGCAGTCAATGAAAAGGGTGAG
GCGCAGCTCATCAGCATGATGTCCTGTACGGTGATACATCGTCACAAGTT
CCAGACGGGCGTACAGTGCATCTGCTTCAGTCCAAATGGAGCATTCTTTG
CCGTCGCTGTGCAGAACGTAGTGTTGATATTCTGTGCACCTGGTGAGATC
ACAGGGGAGTACAATCCTTTCGTCCTGCGCCGAAGATTCCTAGGTGGATT
CGACGATGTCACTTGGCTGGACTGGTCTTCGGACTCTCGACTTTTGGCAA
TCGGCTGTCGGGATAGCTCCACCAAAATCGTTGCCATCAACTATACAAAG
AACTTCCGCACCTATAACCTAAGTGGCCACACAGACGCCATTGTAGCTTG
TTTTTTCGAGGCAAACAGCTTGCACTTGAACACCATAAGCCGCAATGGTC
AGCTCTGCTTGTGGGAATGCAGCCTAGCTCCCTCGGATTTAGAGGATGCT
GAAAGGCCAAAAATCGCTCCCCCCTCAAGGAAGAAGGAAAAGAAGGCAGT
ATCTGACAATGAGTCAGAAGATGACGTTGAAAATGTAATGGAAAAGGATG
CGTTGAAGGAGGAATCTACCAAGGAAGCCAAAAA

BO15571.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-PA 2850 CG12325-RA 1..707 17..723 3535 100 Plus
CG12325-PA 2850 CG12325-RA 711..813 727..829 490 99 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-RB 3410 CG12325-RB 296..1108 17..829 4005 99.6 Plus
CG12325-RA 3220 CG12325-RA 106..918 17..829 4005 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10823939..10824620 148..829 3350 99.4 Plus
2R 25286936 2R 10823771..10823883 35..147 565 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:42:27 has no hits.

BO15571.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:51:19 Download gff for BO15571.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-PA 1..813 17..829 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:55:28 Download gff for BO15571.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-PA 1..813 17..829 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:10:34 Download gff for BO15571.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 106..918 17..829 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:26:38 Download gff for BO15571.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12325-RA 106..918 17..829 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:26:38 Download gff for BO15571.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10823700..10823717 17..34 100 -> Plus
2R 10823771..10823883 35..147 100 -> Plus
2R 10823939..10824620 148..829 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:10:34 Download gff for BO15571.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6711205..6711222 17..34 100 -> Plus
arm_2R 6711276..6711388 35..147 100 -> Plus
arm_2R 6711444..6712125 148..829 99   Plus

BO15571.pep Sequence

Translation from 16 to 2881

> BO15571.pep
MKFSYKFSNLLGTIYRNGNLVFTPDGNSVISPVGNRITVYDLKNNKSRTL
SLESRYNYTNIALSPDGSLLIAVNEKGEAQLISMMSCTVIHRHKFQTGVQ
CICFSPNGAFFAVAVQNVVLIFCAPGEITGEYNPFVLRRRFLGGFDDVTW
LDWSSDSRLLAIGCRDSSTKIVAINYTKNFRTYNLSGHTDAIVACFFEAN
SLHLNTISRNGQLCLWECSLAPSDLEDAERPKIAPPQRKKEKKAVSDNES
EDDVENVVEKDALKEESTKEAEDVNHIKNEDETKSHPFFYKKITRHYLAD
EPRKEQRDVQLTAANYNTRTKVLVVAFSSGAFYLYELPDVNMIHSLSISD
YPISAALFNCTGDWVALASREIGQLLVWEWQSEQYIMKQQGHSSEMTCIA
YSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFL
VSSSLDGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYSGELVVAGGQDV
FDIFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIW
NCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIFDIKSAGQV
TTIEGRNDLSAGRLETDIITARKNAQANYFSTIEYSADGECILAAGKSAN
ICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLSEFGNMALVEEREEL
EGGRVAIRLPGVQRGDMSSRRFQQEVRVFSVKFSPTGQAFAAAGTEGLCI
YALDKGVVFDPFDLSLEVTPKAVHESLKQQNYTKALVMSLKLNEPNLIAL
VLERVPYKDVELVCADLSPEFAQRLLQQLARQLQSTPHIEFYLQWSCCLL
TKHGNQDGVFQHTGLLALHEVLSRKYEMLNKICDYNKYTLKVLLDRADKL
EQKNEGKPNATEEDSDEEMLLIRSKDDENGQAQFSDEEESDSGSEEEMAA
SFLDH

BO15571.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12325-PB 949 CG12325-PB 1..949 1..949 4911 100 Plus
CG12325-PA 949 CG12325-PA 1..949 1..949 4911 100 Plus
wds-PB 361 CG17437-PB 70..284 391..608 245 26.5 Plus
wds-PA 361 CG17437-PA 70..284 391..608 245 26.5 Plus
Taf5-PA 704 CG7704-PA 448..646 391..593 240 29.6 Plus
wds-PB 361 CG17437-PB 113..354 344..591 227 27.6 Plus
wds-PA 361 CG17437-PA 113..354 344..591 227 27.6 Plus
wds-PB 361 CG17437-PB 60..329 338..608 212 23.8 Plus
wds-PA 361 CG17437-PA 60..329 338..608 212 23.8 Plus
wds-PB 361 CG17437-PB 122..357 316..550 207 20.1 Plus
wds-PA 361 CG17437-PA 122..357 316..550 207 20.1 Plus