Clone BO15593 Report

Search the DGRC for BO15593

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:155
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptCG31522-RA
Protein status:BO15593.pep: validated full length
Sequenced Size:1126

Clone Sequence Records

BO15593.3prime Sequence

755 bp (742 high quality bases) assembled on 2006-05-30

> BO15593.3prime
ATGGTCTAGAAAGCTTGCTTTCGGCGTCTTCCGCTGTTTCAGCTCCTGGG
AGGCGTCGTCCAGCAGCTTGGTGGCATACCCGTTGCTCAGTCCTCCGTTG
GACCCCTTGTGCGCGCTGCCGTTGGCCACCTGCTTGTAGACGTTCTCCAC
CCCATTGGCATGTCCATTGCTCGGCGGGGTGCTGCTCCCGTTGGCCTTGG
ATGCGGGCGTCGCTGTCGCTGTCGCCTCCGTGGTCTGTGGCATGGCCAGA
TCGTCATGGGCGTTGATGCTCTTGCAGTAGCCATTGGGCTTGGCGTGTCC
GTTGGCCAGGGCTCCGTTCTTTTTCATCATGCGGCTCCTGTAGGCTGCCT
TGTAGAACTCGTTGAACAGGAAGAAGAACATGACGGCATGCATGCCAATC
CACCAGACGAACGCCTTCGGGTAGTTGCAATCGATGAAGAGCAGCTGGAA
GGCGTGCACCATGATCAAGATGAACTGGACCATCTGCAGAGTGGTCAGGT
ACTTCTTCCACCAGAGGTATTTCTGGTACTGCGGACCCATGGCGGAGAAC
ATGTAGTAGGTGTACATCACGATGTGGACGAAGGTGTTGAGCAGGCCGAA
GAAGGTGCTGTGACCACCCGGTGTGAACTTGACGCCGAACCAGACCGACA
TGGGCATGCAGCCGTGATGGATGACGTGCAGTGTGGTAACTTGGCTCGAC
TTCTTGCGCAACACGAAGAAAATCGTATCCATGAATTCTGTAAACTTCGA
GAAGT

BO15593.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-PD 1098 CG31522-RD 359..1095 755..19 3685 100 Minus
CG31522-PA 1095 CG31522-RA 356..1092 755..19 3685 100 Minus
CG31522-PB 1098 CG31522-RB 359..1095 755..19 3685 100 Minus
CG31523-PC 1065 CG31523-RC 555..623 559..491 195 91.3 Minus
CG31523-PB 1065 CG31523-RB 555..623 559..491 195 91.3 Minus
CG31523-PA 1065 CG31523-RA 555..623 559..491 195 91.3 Minus
CG31523-PD 1065 CG31523-RD 555..623 559..491 195 91.3 Minus
CG31523-PC 1065 CG31523-RC 428..461 686..653 145 97 Minus
CG31523-PB 1065 CG31523-RB 428..461 686..653 145 97 Minus
CG31523-PA 1065 CG31523-RA 428..461 686..653 145 97 Minus
CG31523-PD 1065 CG31523-RD 428..461 686..653 145 97 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RI 2964 CG31522-RI 893..1629 755..19 3685 100 Minus
CG31522-RH 2213 CG31522-RH 677..1413 755..19 3685 100 Minus
CG31522-RG 2352 CG31522-RG 816..1552 755..19 3685 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4442750..4443056 19..325 1535 100 Plus
3R 32079331 3R 4443902..4444058 325..481 785 100 Plus
3R 32079331 3R 4444110..4444249 479..618 700 100 Plus
3R 32079331 3R 7982801..7983121 435..755 555 78.2 Plus
3R 32079331 3R 4444319..4444428 615..724 550 100 Plus
3R 32079331 3R 4467642..4467766 491..615 325 84 Plus
3R 32079331 3R 22555685..22555806 580..459 235 79.5 Minus
3R 32079331 3R 22559608..22559737 479..608 230 78.5 Plus
3R 32079331 3R 22532970..22533076 482..588 205 79.4 Plus
Blast to na_te.dros performed on 2015-02-12 04:17:36 has no hits.

BO15593.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:51:50 Download gff for BO15593.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PA 356..1095 15..755 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:12 Download gff for BO15593.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PB 359..1098 15..755 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:37:38 Download gff for BO15593.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RG 816..1555 15..755 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:04:40 Download gff for BO15593.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RG 816..1555 15..755 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:04:40 Download gff for BO15593.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4442747..4443055 15..324 99 <- Plus
3R 4443902..4444057 325..480 100 <- Plus
3R 4444112..4444248 481..617 100 <- Plus
3R 4444322..4444427 618..723 100 <- Plus
3R 4444506..4444537 724..755 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:37:38 Download gff for BO15593.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 268469..268777 15..324 99 <- Plus
arm_3R 269624..269779 325..480 100 <- Plus
arm_3R 269834..269970 481..617 100 <- Plus
arm_3R 270044..270149 618..723 100 <- Plus
arm_3R 270228..270259 724..755 100   Plus

BO15593.5prime Sequence

806 bp (774 high quality bases) assembled on 2006-05-30

> BO15593.5prime
GAAGTTATCAGTCGACATGGCCTTAATTATGAAATACATCGACAGCATAA
GCAGATACATGGACTCACATAGTGACTCGAGGACAAAGGGCTGGCCCATG
ATGTCGTCCCCATTCCCCACACTGGCCGTTTGCCTCACATATGTCTATCT
GGTCAAGGTGCTGGGACCCCGATTAATGGAGAACCGAAAGCCTCTGAATC
TGCAAAACACTCTAGTCATGTACAATGCCATACAGGTTGTATTTAGCGCA
TGGCTGTTTTATGAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTT
CCGGTGCCAGCCGGTGGACTACACAGATAGTCCCACATCCCGGAGAATGG
TTCATGCCTGCTGGTGGTACTACTTCTCGAAGTTTACAGAATTCATGGAT
ACGATTTTCTTCGTGTTGCGCAAGAAGTCGAGCCAAGTTACCACACTGCA
CGTCATCCATCACGGCTGCATGCCCATGTCGGTCTGGTTCGGCGTCAAGT
TCACACCGGGTGGTCACAGCACCTTCTTCGGCCTGCTCAACACCTTCGTC
CACATCGTGATGTACACCTACTACATGTTCTCCGCCATGGGTCCGCAGTA
CCAGAAATACCTCTGGTGGAAGAAGTACCTGACCACTCTGCAGATGGTCC
AGTTCATCTTGATCATGGTGCACGCCTTCCAGCTGCTCTTCATCGATTGC
AACTACCCGAAGGCGTTCGTCTGGTGGATTGGCATGCATGCCGTCATGTT
CTTCTTCCTGTTCAACGAGTTCTACAAAGCAGCCTACAGGAGCCGCATGA
TGAAAA

BO15593.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-PA 1095 CG31522-RA 1..790 17..806 3925 99.8 Plus
CG31522-PD 1098 CG31522-RD 334..793 347..806 2275 99.7 Plus
CG31522-PB 1098 CG31522-RB 334..793 347..806 2275 99.7 Plus
CG31522-PD 1098 CG31522-RD 1..249 17..265 1245 100 Plus
CG31522-PB 1098 CG31522-RB 1..249 17..265 1245 100 Plus
CG31522-PC 231 CG31522-RC 1..58 17..74 290 100 Plus
CG31523-PC 1065 CG31523-RC 555..623 568..636 195 91.3 Plus
CG31523-PB 1065 CG31523-RB 555..623 568..636 195 91.3 Plus
CG31523-PA 1065 CG31523-RA 555..623 568..636 195 91.3 Plus
CG31523-PD 1065 CG31523-RD 555..623 568..636 195 91.3 Plus
CG31523-PC 1065 CG31523-RC 428..461 441..474 145 97 Plus
CG31523-PB 1065 CG31523-RB 428..461 441..474 145 97 Plus
CG31523-PA 1065 CG31523-RA 428..461 441..474 145 97 Plus
CG31523-PD 1065 CG31523-RD 428..461 441..474 145 97 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RH 2213 CG31522-RH 322..1111 17..806 3935 99.9 Plus
CG31522-RG 2352 CG31522-RG 461..1250 17..806 3935 99.9 Plus
CG31522-RA 2460 CG31522-RA 569..1358 17..806 3935 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4443902..4444058 802..646 770 99.4 Minus
3R 32079331 3R 4444110..4444249 648..509 700 100 Minus
3R 32079331 3R 7982801..7983135 692..358 625 79.1 Minus
3R 32079331 3R 4444319..4444428 512..403 550 100 Minus
3R 32079331 3R 4446425..4446534 265..156 550 100 Minus
3R 32079331 3R 4446737..4446823 160..74 435 100 Minus
3R 32079331 3R 4446166..4446248 346..264 415 100 Minus
3R 32079331 3R 4467642..4467766 636..512 325 84 Minus
3R 32079331 3R 4447701..4447758 74..17 290 100 Minus
3R 32079331 3R 4444506..4444562 403..347 285 100 Minus
3R 32079331 3R 22555685..22555806 547..668 235 79.5 Plus
3R 32079331 3R 22559608..22559737 648..519 230 78.5 Minus
3R 32079331 3R 22532970..22533076 645..539 205 79.4 Minus
Blast to na_te.dros performed on 2015-02-11 13:13:10 has no hits.

BO15593.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:51:51 Download gff for BO15593.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PA 1..786 17..802 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:13 Download gff for BO15593.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PA 1..786 17..802 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:08:23 Download gff for BO15593.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 562..1354 9..802 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:34:27 Download gff for BO15593.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 562..1354 9..802 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:34:27 Download gff for BO15593.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4446425..4446532 158..265 100 <- Minus
3R 4446740..4446822 75..157 100 <- Minus
3R 4447701..4447762 9..74 93   Minus
3R 4443902..4444057 647..802 99 <- Minus
3R 4444112..4444248 510..646 100 <- Minus
3R 4444322..4444427 404..509 100 <- Minus
3R 4444506..4444562 347..403 100 <- Minus
3R 4446166..4446246 266..346 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:08:23 Download gff for BO15593.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 272147..272254 158..265 100 <- Minus
arm_3R 272462..272544 75..157 100 <- Minus
arm_3R 273423..273484 9..74 93   Minus
arm_3R 269624..269779 647..802 99 <- Minus
arm_3R 269834..269970 510..646 100 <- Minus
arm_3R 270044..270149 404..509 100 <- Minus
arm_3R 270228..270284 347..403 100 <- Minus
arm_3R 271888..271968 266..346 100 <- Minus

BO15593.complete Sequence

1126 bp (1126 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633508

> BO15593.complete
GAAGTTATCAGTCGACATGGCCTTAATTATGAAATACATCGACAGCATAA
GCAGATACATGGACTCACATAGTGACTCGAGGACAAAGGGCTGGCCCATG
ATGTCGTCCCCATTCCCCACACTGGCCGTTTGCCTCACATATGTCTATCT
GGTCAAGGTGCTGGGACCCCGATTAATGGAGAACCGAAAGCCTCTGAATC
TGCAAAACACTCTAGTCATGTACAATGCCATACAGGTTGTATTTAGCGCA
TGGCTGTTTTATGAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTT
CCGGTGCCAGCCGGTGGACTACACAGATAGTCCCACATCCCGGAGAATGG
TTCATGCCTGCTGGTGGTACTACTTCTCGAAGTTTACAGAATTCATGGAT
ACGATTTTCTTCGTGTTGCGCAAGAAGTCGAGCCAAGTTACCACACTGCA
CGTCATCCATCACGGCTGCATGCCCATGTCGGTCTGGTTCGGCGTCAAGT
TCACACCGGGTGGTCACAGCACCTTCTTCGGCCTGCTCAACACCTTCGTC
CACATCGTGATGTACACCTACTACATGTTCTCCGCCATGGGTCCGCAGTA
CCAGAAATACCTCTGGTGGAAGAAGTACCTGACCACTCTGCAGATGGTCC
AGTTCATCTTGATCATGGTGCACGCCTTCCAGCTGCTCTTCATCGATTGC
AACTACCCGAAGGCGTTCGTCTGGTGGATTGGCATGCATGCCGTCATGTT
CTTCTTCCTGTTCAACGAGTTCTACAAGGCAGCCTACAGGAGCCGCATGA
TGAAAAAGAACGGAGCCCTGGCCAACGGACACGCCAAGCCCAATGGCTAC
TGCAAGAGCATCAACGCCCATGACGATCTGGCCATGCCACAGACCACGGA
GGCGACAGCGACAGCGACGCCCGCATCCAAGGCCAACGGGAGCAGCACCC
CGCCGAGCAATGGACATGCCAATGGGGTGGAGAACGTCTACAAGCAGGTG
GCCAACGGCAGCGCGCACAAGGGGTCCAACGGAGGACTGAGCAACGGGTA
TGCCACCAAGCTGCTGGACGACGCCTCCCAGGAGCTGAAACAGCGGAAGA
CGCCGAAAGCAAGCTTTCTAGACCAT

BO15593.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RH 1095 CG31522-PH 1..1092 17..1108 5460 100 Plus
CG31522-RG 1095 CG31522-PG 1..1092 17..1108 5460 100 Plus
CG31522-RA 1095 CG31522-PA 1..1092 17..1108 5460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RH 2213 CG31522-RH 322..1413 17..1108 5460 100 Plus
CG31522-RG 2352 CG31522-RG 461..1552 17..1108 5460 100 Plus
CG31522-RA 2460 CG31522-RA 569..1660 17..1108 5460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4442750..4443056 1108..802 1535 100 Minus
3R 32079331 3R 4443902..4444058 802..646 785 100 Minus
3R 32079331 3R 4444110..4444249 648..509 700 100 Minus
3R 32079331 3R 7982801..7983135 692..358 625 79.1 Minus
3R 32079331 3R 4444319..4444428 512..403 550 100 Minus
3R 32079331 3R 4446425..4446534 265..156 550 100 Minus
3R 32079331 3R 4446737..4446823 160..74 435 100 Minus
3R 32079331 3R 4446166..4446248 346..264 415 100 Minus
3R 32079331 3R 4467642..4467766 636..512 325 84 Minus
3R 32079331 3R 4447701..4447758 74..17 290 100 Minus
3R 32079331 3R 4444506..4444562 403..347 285 100 Minus
3R 32079331 3R 22555685..22555806 547..668 235 79.5 Plus
3R 32079331 3R 22559608..22559737 648..519 230 78.5 Minus
3R 32079331 3R 22532970..22533076 645..539 205 79.4 Minus
Blast to na_te.dros performed on 2014-11-26 15:53:48 has no hits.

BO15593.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:23 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 1..1095 17..1112 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:27 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 537..1638 9..1112 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:05:51 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 569..1660 17..1110 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:23 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 537..1638 9..1112 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:16 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RA 569..1660 17..1110 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:16 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4442748..4443055 803..1110 99 <- Minus
3R 4443902..4444057 647..802 100 <- Minus
3R 4444112..4444248 510..646 100 <- Minus
3R 4444322..4444427 404..509 100 <- Minus
3R 4444506..4444562 347..403 100 <- Minus
3R 4446166..4446246 266..346 100 <- Minus
3R 4446425..4446532 158..265 100 <- Minus
3R 4446740..4446822 75..157 100 <- Minus
3R 4447701..4447758 17..74 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:05:51 Download gff for BO15593.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 268470..268777 803..1110 99 <- Minus
arm_3R 269624..269779 647..802 100 <- Minus
arm_3R 269834..269970 510..646 100 <- Minus
arm_3R 270044..270149 404..509 100 <- Minus
arm_3R 270228..270284 347..403 100 <- Minus
arm_3R 271888..271968 266..346 100 <- Minus
arm_3R 272147..272254 158..265 100 <- Minus
arm_3R 272462..272544 75..157 100 <- Minus
arm_3R 273423..273480 17..74 100   Minus

BO15593.pep Sequence

Translation from 16 to 1126

> BO15593.pep
MALIMKYIDSISRYMDSHSDSRTKGWPMMSSPFPTLAVCLTYVYLVKVLG
PRLMENRKPLNLQNTLVMYNAIQVVFSAWLFYECLMGGWWGSYSFRCQPV
DYTDSPTSRRMVHACWWYYFSKFTEFMDTIFFVLRKKSSQVTTLHVIHHG
CMPMSVWFGVKFTPGGHSTFFGLLNTFVHIVMYTYYMFSAMGPQYQKYLW
WKKYLTTLQMVQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFN
EFYKAAYRSRMMKKNGALANGHAKPNGYCKSINAHDDLAMPQTTEATATA
TPASKANGSSTPPSNGHANGVENVYKQVANGSAHKGSNGGLSNGYATKLL
DDASQELKQRKTPKASFLDH

BO15593.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-PH 364 CG31522-PH 1..364 1..364 1990 100 Plus
CG31522-PG 364 CG31522-PG 1..364 1..364 1990 100 Plus
CG31522-PA 364 CG31522-PA 1..364 1..364 1990 100 Plus
CG31522-PI 392 CG31522-PI 1..392 1..364 1951 92.9 Plus
CG31522-PF 365 CG31522-PF 1..365 1..364 1904 96.4 Plus