Clone BO15603 Report

Search the DGRC for BO15603

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:3
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO15603.pep: validated not full length
Sequenced Size:1369

Clone Sequence Records

BO15603.complete Sequence

1369 bp (1369 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633510

> BO15603.complete
GAAGTTATCAGTCGACATGTATGATCTCGACATGGAGACCTCCTTTAATT
CGCTGTGGGAAACCTGTATCTTGCGTCAGTCAACTGGGGCAAACGATATC
GATGAGAGCGAGTTGAACCAGGAGTATTTGAAGGAGGGATCCGTGTTTGT
GCACAACACTGATGTGGATGGCAAGCCGTTGTTGGTATTCCGCGTTAAGA
TGCACAGTAAGTCCAAGAACCTGGACGAACTGATACGCATCGTGGTGTAC
TGGGTGGAAAGGACTCAGAGGGAGCAGCATCTGACCCAGTTGACCATATT
CTTCGACATGTCGGGCACGAGTTTGGCCTCCATGGATCTGGAGTTTGTGA
AACGCATTGTGGAGACATTTAAGCAGTTCTATCCCAATAGCTTGAACTAC
ATTTTGGTATATGAACTGGGCTGGGTACTAAATGCTGCTTTTAAGGTCAT
CAAGGCGGTGCTGCCACCCAAAGCGGTTGAGATTTTAAAAATGATATCGA
AAAAGGACATCAACCAGTACATTAACAAGGATAACTGCCTGGCCATCTGG
GGTGGCGAGGATAACTACGAATTTAGCTTTGTGCCGGAGGCTAAAAAGGT
CATTTCCAAACCGGTGGCTGCCAATGCTGGCGATGATGACCAATTCGCGG
ACAAAAAGGTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACC
AACATCAACAAGATGCACACTCCATCCGAGGGCATGTTGCACATCAATCC
CAAGGATTTTGTCAACTTCAATTCCAAGAATGCGGAAGCCACGATGACCA
TCAAGTCTATTGCCACCTCGGCAGTGACGTACAAGATCCAAACCACATCG
CCGGAGAAGTTCCGTGTGCGACCACGTTGCGGCATCATCCAGCCCAATCA
GGAGGCCACCATCAACATATGGTTGAAGTCGGAGCACAAGCTTAGTGACG
ACAGCAAGGATAAGTTCCTGGTGATGGCTATGGTCGCGCCAGGCGGTGAA
TGCGGTGGCGCCGATGTGACCGAGCTGTGGCGGAGCAAATCCCCCACATC
TGCGGATGTGGAGCAGCATCGACTGGTCTGCCGCTTCGATGAGAACAAAT
CAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGAT
TGCAGCAAGAAGTCCGGTGCTGGCGTAGATCCAGCTACGGCAATGGAGCG
TCAGTTGGCATTCACCCAGAACCTGCAATACGTGACGCTGGCGCTGTTGT
TCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCAG
CACGCCGCTACCTGTCCCAAGGCAACGGCGTATTCGTGCGCTAAGCGCAA
AGCAAGCTTTCTAGACCAT

BO15603.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
Vap-33B-RF 1965 CG33523-PF 160..1494 17..1351 6675 100 Plus
Vap-33B-RD 1497 CG33523-PD 160..1494 17..1351 6675 100 Plus
Vap-33B-RA 705 CG33523-PA 9..702 658..1351 3470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
Vap-33B-RF 2574 CG33523-RF 403..1737 17..1351 6675 100 Plus
Vap-33B-RD 2574 CG33523-RD 403..1737 17..1351 6675 100 Plus
Vap-33B-RE 2672 CG33523-RE 1142..1835 658..1351 3470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5924905..5925322 17..434 2090 100 Plus
3L 28110227 3L 5928702..5929040 834..1172 1695 100 Plus
3L 28110227 3L 5925400..5925626 434..660 1135 100 Plus
3L 28110227 3L 5929104..5929283 1172..1351 900 100 Plus
3L 28110227 3L 5928536..5928640 731..835 525 100 Plus
3L 28110227 3L 5928222..5928297 657..732 380 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:18:54 has no hits.

BO15603.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:25 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 153..1497 8..1355 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:31 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 203..1552 8..1360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:29 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 212..1546 17..1353 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:26 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 203..1552 8..1360 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:36 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
Vap-33B-RD 403..1737 17..1353 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:36 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5925401..5925624 435..658 100 -> Plus
3L 5928224..5928296 659..731 100 -> Plus
3L 5928537..5928640 732..835 100 -> Plus
3L 5928704..5929039 836..1171 100 -> Plus
3L 5929104..5929283 1172..1353 98   Plus
3L 5924905..5925322 17..434 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:29 Download gff for BO15603.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5921637..5921740 732..835 100 -> Plus
arm_3L 5918005..5918422 17..434 100 -> Plus
arm_3L 5918501..5918724 435..658 100 -> Plus
arm_3L 5921324..5921396 659..731 100 -> Plus
arm_3L 5921804..5922139 836..1171 100 -> Plus
arm_3L 5922204..5922383 1172..1353 98   Plus

BO15603.pep Sequence

Translation from 16 to 1369

> BO15603.pep
MYDLDMETSFNSLWETCILRQSTGANDIDESELNQEYLKEGSVFVHNTDV
DGKPLLVFRVKMHSKSKNLDELIRIVVYWVERTQREQHLTQLTIFFDMSG
TSLASMDLEFVKRIVETFKQFYPNSLNYILVYELGWVLNAAFKVIKAVLP
PKAVEILKMISKKDINQYINKDNCLAIWGGEDNYEFSFVPEAKKVISKPV
AANAGDDDQFADKKVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVN
FNSKNAEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATIN
IWLKSEHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQ
HRLVCRFDENKSKAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFT
QNLQYVTLALLFLLFAGFGFLMYQQLGQHAATCPKATAYSCAKRKASFLD
H

BO15603.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
Vap-33B-PF 654 CG33523-PF 54..502 1..449 2308 99.3 Plus
Vap-33B-PD 498 CG33523-PD 54..498 1..445 2307 100 Plus
Vap-33B-PA 234 CG33523-PA 3..234 214..445 1199 99.6 Plus
Vap-33B-PC 240 CG33523-PC 10..240 215..445 1197 100 Plus
Vap-33B-PE 285 CG33523-PE 54..271 1..218 1119 98.6 Plus