BO15603.complete Sequence
1369 bp (1369 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633510
> BO15603.complete
GAAGTTATCAGTCGACATGTATGATCTCGACATGGAGACCTCCTTTAATT
CGCTGTGGGAAACCTGTATCTTGCGTCAGTCAACTGGGGCAAACGATATC
GATGAGAGCGAGTTGAACCAGGAGTATTTGAAGGAGGGATCCGTGTTTGT
GCACAACACTGATGTGGATGGCAAGCCGTTGTTGGTATTCCGCGTTAAGA
TGCACAGTAAGTCCAAGAACCTGGACGAACTGATACGCATCGTGGTGTAC
TGGGTGGAAAGGACTCAGAGGGAGCAGCATCTGACCCAGTTGACCATATT
CTTCGACATGTCGGGCACGAGTTTGGCCTCCATGGATCTGGAGTTTGTGA
AACGCATTGTGGAGACATTTAAGCAGTTCTATCCCAATAGCTTGAACTAC
ATTTTGGTATATGAACTGGGCTGGGTACTAAATGCTGCTTTTAAGGTCAT
CAAGGCGGTGCTGCCACCCAAAGCGGTTGAGATTTTAAAAATGATATCGA
AAAAGGACATCAACCAGTACATTAACAAGGATAACTGCCTGGCCATCTGG
GGTGGCGAGGATAACTACGAATTTAGCTTTGTGCCGGAGGCTAAAAAGGT
CATTTCCAAACCGGTGGCTGCCAATGCTGGCGATGATGACCAATTCGCGG
ACAAAAAGGTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACC
AACATCAACAAGATGCACACTCCATCCGAGGGCATGTTGCACATCAATCC
CAAGGATTTTGTCAACTTCAATTCCAAGAATGCGGAAGCCACGATGACCA
TCAAGTCTATTGCCACCTCGGCAGTGACGTACAAGATCCAAACCACATCG
CCGGAGAAGTTCCGTGTGCGACCACGTTGCGGCATCATCCAGCCCAATCA
GGAGGCCACCATCAACATATGGTTGAAGTCGGAGCACAAGCTTAGTGACG
ACAGCAAGGATAAGTTCCTGGTGATGGCTATGGTCGCGCCAGGCGGTGAA
TGCGGTGGCGCCGATGTGACCGAGCTGTGGCGGAGCAAATCCCCCACATC
TGCGGATGTGGAGCAGCATCGACTGGTCTGCCGCTTCGATGAGAACAAAT
CAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGAT
TGCAGCAAGAAGTCCGGTGCTGGCGTAGATCCAGCTACGGCAATGGAGCG
TCAGTTGGCATTCACCCAGAACCTGCAATACGTGACGCTGGCGCTGTTGT
TCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCAG
CACGCCGCTACCTGTCCCAAGGCAACGGCGTATTCGTGCGCTAAGCGCAA
AGCAAGCTTTCTAGACCAT
BO15603.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vap-33B-RF | 1965 | CG33523-PF | 160..1494 | 17..1351 | 6675 | 100 | Plus |
Vap-33B-RD | 1497 | CG33523-PD | 160..1494 | 17..1351 | 6675 | 100 | Plus |
Vap-33B-RA | 705 | CG33523-PA | 9..702 | 658..1351 | 3470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vap-33B-RF | 2574 | CG33523-RF | 403..1737 | 17..1351 | 6675 | 100 | Plus |
Vap-33B-RD | 2574 | CG33523-RD | 403..1737 | 17..1351 | 6675 | 100 | Plus |
Vap-33B-RE | 2672 | CG33523-RE | 1142..1835 | 658..1351 | 3470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:18:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5924905..5925322 | 17..434 | 2090 | 100 | Plus |
3L | 28110227 | 3L | 5928702..5929040 | 834..1172 | 1695 | 100 | Plus |
3L | 28110227 | 3L | 5925400..5925626 | 434..660 | 1135 | 100 | Plus |
3L | 28110227 | 3L | 5929104..5929283 | 1172..1351 | 900 | 100 | Plus |
3L | 28110227 | 3L | 5928536..5928640 | 731..835 | 525 | 100 | Plus |
3L | 28110227 | 3L | 5928222..5928297 | 657..732 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:18:54 has no hits.
BO15603.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:25 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33523-RD | 153..1497 | 8..1355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:31 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33523-RD | 203..1552 | 8..1360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:29 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33523-RD | 212..1546 | 17..1353 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:26 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33523-RD | 203..1552 | 8..1360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:36 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vap-33B-RD | 403..1737 | 17..1353 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:36 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5925401..5925624 | 435..658 | 100 | -> | Plus |
3L | 5928224..5928296 | 659..731 | 100 | -> | Plus |
3L | 5928537..5928640 | 732..835 | 100 | -> | Plus |
3L | 5928704..5929039 | 836..1171 | 100 | -> | Plus |
3L | 5929104..5929283 | 1172..1353 | 98 | | Plus |
3L | 5924905..5925322 | 17..434 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:29 Download gff for
BO15603.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5921637..5921740 | 732..835 | 100 | -> | Plus |
arm_3L | 5918005..5918422 | 17..434 | 100 | -> | Plus |
arm_3L | 5918501..5918724 | 435..658 | 100 | -> | Plus |
arm_3L | 5921324..5921396 | 659..731 | 100 | -> | Plus |
arm_3L | 5921804..5922139 | 836..1171 | 100 | -> | Plus |
arm_3L | 5922204..5922383 | 1172..1353 | 98 | | Plus |
BO15603.pep Sequence
Translation from 16 to 1369
> BO15603.pep
MYDLDMETSFNSLWETCILRQSTGANDIDESELNQEYLKEGSVFVHNTDV
DGKPLLVFRVKMHSKSKNLDELIRIVVYWVERTQREQHLTQLTIFFDMSG
TSLASMDLEFVKRIVETFKQFYPNSLNYILVYELGWVLNAAFKVIKAVLP
PKAVEILKMISKKDINQYINKDNCLAIWGGEDNYEFSFVPEAKKVISKPV
AANAGDDDQFADKKVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVN
FNSKNAEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATIN
IWLKSEHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQ
HRLVCRFDENKSKAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFT
QNLQYVTLALLFLLFAGFGFLMYQQLGQHAATCPKATAYSCAKRKASFLD
H
BO15603.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vap-33B-PF | 654 | CG33523-PF | 54..502 | 1..449 | 2308 | 99.3 | Plus |
Vap-33B-PD | 498 | CG33523-PD | 54..498 | 1..445 | 2307 | 100 | Plus |
Vap-33B-PA | 234 | CG33523-PA | 3..234 | 214..445 | 1199 | 99.6 | Plus |
Vap-33B-PC | 240 | CG33523-PC | 10..240 | 215..445 | 1197 | 100 | Plus |
Vap-33B-PE | 285 | CG33523-PE | 54..271 | 1..218 | 1119 | 98.6 | Plus |