BO15605.complete Sequence
1459 bp (1459 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633511
> BO15605.complete
GAAGTTATCAGTCGACATGAAAACCCAAATAACAGACATTAATCATTTTG
CTTTCTTTCGCATACTCGACATTCTGAAGAAAAACTGTGAAACACAGCAT
GGCGATGAAACTGAGGAGATCATAAAATACGCTGATATCCTTAATTTCGC
TACCGCAAGCTTTAAATTTACACGAATCGTTAGGGACTGGGATATACATT
TCTACACACGTTTGGCGATACATGAGTTGCATGTAGTTCCGCGGAGAAAT
ATAACCATAAACCTTGACGCGATGTATAAAACTCTAAATGCAGAAACAGA
GGAAGGAAGAAAGCATTTGGTGAACATCATAACTAGTATCGTATCAAATC
CCAGTATTCGAAGACTTAAACTGAATAATCTCGATGCATTCTTTTACGAG
GAGCACTCGAGTTTCGCTGATGAAATTTTAAAGATATTGCAATTGAAACG
TAACAGCAAACCAATTGAGTTAATTCTTAATATACCAGGTCGTGAAATAC
GTAACCTTCATGGCTTTCGAAATATCTCCAAGCTCATCCTAACGGCATCT
ATTGAAATTTCTGACCTTGAGAAATTTTGCCTTTATAACCCTAAATTGAG
TACCTTGGAAGTGAATCAAAGTCACTTTTCCGACCATGGAAAGCTAGCTC
AAATCGTTCCCCACTGCTCCAATTTAAAGAATTTAAAATTTATACTGGAT
GATAATGCATGGGATAATGATTACGTCAGACTATCGCGTTTAAATAGGCT
ACAAAAATTGATAATTCTGCTGCCTGAAAATAATGAAAATGATATGGAAA
TCGACATTGAATCGCACGAAGAAGAAGAAGATATGGGCATGTACTTCGAG
GAAATTGGAGCAGTCTCAACTTATACGCGGTCCATTCCAATCTTTCAGCT
CCTTAAAGCTTTACACGAAAAGGAAAAATCTACACTAAGGGAATTGCGTT
TAGGTTTTAACATTGATGATGAAATGGTACAGCTTATTTCGAAATTAAAT
GAACTACGAGGGTTGGAGTGCGGATTTTATGATCCTAAAAGCGTTAGCCA
TTTTGTACAACACCCAAATCTTAAACGATTAAGCACACTCAATAAGGCTT
CAATAATTACCGATGATTATGCAGCTTTGCTAGAAAAACAATGCACTATC
TCAAATTTAGACACAAAAATTATTTTTAATGCTAAGGGAACCCTAAGTAT
ATTTACAGAGAAGGTGGACATTCTTCGGTCGGGTAACTGTGAATCGTTTT
TGAAACTGAAAAACCTTAAAAAAATATTTGTTCCTGACAATATGATCAAA
TATGAGAAAGCGACATTGGACCGGTTTTTAGCGCTCGGTGTGGAACTGAT
AGACTATAACAGTGCAAGTTCGGGCCTTGAGTCTGTTTCTGATTCTGGCC
CAGATTATAGTTTTCTTTGGAACCATTCGGATGAAAATAAAGCAAGCTTT
CTAGACCAT
BO15605.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-RA | 1428 | CG32115-PA | 1..1425 | 17..1441 | 7125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:41:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-RA | 1560 | CG32115-RA | 120..1544 | 17..1441 | 7125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12912043..12912998 | 1441..486 | 4780 | 100 | Minus |
| 3L | 28110227 | 3L | 12913054..12913527 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:40:57 has no hits.
BO15605.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:26 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 1..1428 | 17..1445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:33 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 114..1547 | 9..1445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:18 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 120..1544 | 17..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:27 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 114..1547 | 9..1445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:41 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 120..1544 | 17..1443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:41 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12912041..12912995 | 489..1443 | 99 | <- | Minus |
| 3L | 12913056..12913527 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:18 Download gff for
BO15605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12905141..12906095 | 489..1443 | 99 | <- | Minus |
| arm_3L | 12906156..12906627 | 17..488 | 100 | | Minus |
BO15605.pep Sequence
Translation from 16 to 1459
> BO15605.pep
MKTQITDINHFAFFRILDILKKNCETQHGDETEEIIKYADILNFATASFK
FTRIVRDWDIHFYTRLAIHELHVVPRRNITINLDAMYKTLNAETEEGRKH
LVNIITSIVSNPSIRRLKLNNLDAFFYEEHSSFADEILKILQLKRNSKPI
ELILNIPGREIRNLHGFRNISKLILTASIEISDLEKFCLYNPKLSTLEVN
QSHFSDHGKLAQIVPHCSNLKNLKFILDDNAWDNDYVRLSRLNRLQKLII
LLPENNENDMEIDIESHEEEEDMGMYFEEIGAVSTYTRSIPIFQLLKALH
EKEKSTLRELRLGFNIDDEMVQLISKLNELRGLECGFYDPKSVSHFVQHP
NLKRLSTLNKASIITDDYAALLEKQCTISNLDTKIIFNAKGTLSIFTEKV
DILRSGNCESFLKLKNLKKIFVPDNMIKYEKATLDRFLALGVELIDYNSA
SSGLESVSDSGPDYSFLWNHSDENKASFLDH
BO15605.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-PA | 475 | CG32115-PA | 1..475 | 1..475 | 2442 | 100 | Plus |
| CG32107-PE | 956 | CG32107-PE | 10..252 | 2..250 | 223 | 24 | Plus |
| CG32107-PD | 980 | CG32107-PD | 10..252 | 2..250 | 223 | 24 | Plus |
