Clone Sequence Records
BO15611.3prime Sequence
500 bp (500 high quality bases) assembled on 2006-06-02
> BO15611.3prime
ATGGTCTAGAAAGCTTGCCTTTTCCTCTGGTTTGCTGAAGACAAAGGTCA
GGTTGCACTTGCCGCAGTAGTGACGATCTTCGTGGGCAGCCATGAAGACG
CCGGCGCCGCAGTTCTCACCAGGGCACTCGCGACGGAGACGGTGGATCTT
GCCGTTCTCGTCAACCTTGTAGTATTTCAGGACAGCTAGCTTGACCTTCT
TCCTCTTGTGCTTGATTTTCTTGGGAGTGGAGTAGTTCTTCTTCTTGCGC
TTCTTGGCACCACCACGCAGGCGGAGCACCAAGTGCAAAGTGGACTCCTT
CTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAG
CGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATC
TTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGAT
GGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATGTCGACTGATAACT
BO15611.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5271-PA | 471 | RpS27A-RA | 1..468 | 486..19 | 2340 | 100 | Minus |
CG2960-PA | 387 | RpL40-RA | 106..228 | 381..259 | 390 | 92.6 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 787..881 | 384..290 | 275 | 91.5 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 787..881 | 384..290 | 275 | 91.5 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 787..881 | 384..290 | 275 | 91.5 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 94..197 | 393..290 | 270 | 90.3 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 94..197 | 393..290 | 270 | 90.3 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 94..197 | 393..290 | 270 | 90.3 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 310..425 | 405..290 | 255 | 88.7 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 310..425 | 405..290 | 255 | 88.7 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 310..425 | 405..290 | 255 | 88.7 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1222..1337 | 405..290 | 230 | 87.9 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1222..1337 | 405..290 | 230 | 87.9 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1222..1337 | 405..290 | 230 | 87.9 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1927..2021 | 384..290 | 225 | 89.4 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 559..653 | 384..290 | 225 | 89.4 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1015..1109 | 384..290 | 225 | 89.4 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1471..1565 | 384..290 | 225 | 89.4 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1699..1793 | 384..290 | 225 | 89.4 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 559..653 | 384..290 | 225 | 89.4 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1015..1109 | 384..290 | 225 | 89.4 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1471..1565 | 384..290 | 225 | 89.4 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1699..1793 | 384..290 | 225 | 89.4 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1927..2021 | 384..290 | 225 | 89.4 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 559..653 | 384..290 | 225 | 89.4 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1015..1109 | 384..290 | 225 | 89.4 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1471..1565 | 384..290 | 225 | 89.4 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1699..1793 | 384..290 | 225 | 89.4 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1927..2021 | 384..290 | 225 | 89.4 | Minus |
CG11624-PA | 2292 | Ubi-p63E-RA | 2155..2219 | 384..320 | 200 | 92.3 | Minus |
CG11624-PC | 2292 | Ubi-p63E-RC | 2155..2219 | 384..320 | 200 | 92.3 | Minus |
CG11624-PB | 2292 | Ubi-p63E-RB | 2155..2219 | 384..320 | 200 | 92.3 | Minus |
CG32744-PA | 1605 | CG32744-RA | 1140..1193 | 487..434 | 195 | 94.4 | Minus |
CG32744-PA | 1605 | CG32744-RA | 1368..1409 | 487..446 | 185 | 97.6 | Minus |
CG32744-PA | 1605 | CG32744-RA | 684..725 | 487..446 | 185 | 97.6 | Minus |
CG32744-PA | 1605 | CG32744-RA | 912..953 | 487..446 | 185 | 97.6 | Minus |
CG11700-PA | 906 | CG11700-RA | 1..41 | 486..446 | 180 | 97.5 | Minus |
CG32744-PA | 1605 | CG32744-RA | 456..497 | 487..446 | 160 | 95.2 | Minus |
CG32744-PA | 1605 | CG32744-RA | 82..152 | 405..335 | 155 | 88.7 | Minus |
CG32744-PA | 1605 | CG32744-RA | 228..281 | 487..434 | 145 | 90.7 | Minus |
CG32744-PA | 1605 | CG32744-RA | 10..42 | 477..445 | 140 | 96.9 | Minus |
CG32744-PA | 1605 | CG32744-RA | 313..380 | 402..335 | 140 | 88.2 | Minus |
CG11700-PA | 906 | CG11700-RA | 456..497 | 487..446 | 135 | 92.8 | Minus |
CG11700-PA | 906 | CG11700-RA | 228..269 | 487..446 | 135 | 92.8 | Minus |
CG11700-PA | 906 | CG11700-RA | 684..725 | 487..446 | 135 | 92.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:33:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS27A-RA | 592 | CG5271-RA | 56..523 | 486..19 | 2340 | 100 | Minus |
RpL40-RB | 659 | CG2960-RB | 123..350 | 486..259 | 705 | 87.8 | Minus |
RpL40-RA | 587 | CG2960-RA | 65..292 | 486..259 | 705 | 87.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:33:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10409731..10410053 | 486..164 | 1615 | 100 | Minus |
2L | 23513712 | 2L | 10410239..10410387 | 167..19 | 745 | 100 | Minus |
2L | 23513712 | 2L | 4228025..4228252 | 486..259 | 705 | 87.3 | Minus |
X | 23542271 | X | 6277382..6277609 | 260..487 | 585 | 83.8 | Plus |
X | 23542271 | X | 6277610..6277837 | 260..487 | 585 | 83.8 | Plus |
3L | 28110227 | 3L | 3900848..3901075 | 259..486 | 585 | 83.8 | Plus |
X | 23542271 | X | 6277149..6277381 | 255..487 | 580 | 83.3 | Plus |
X | 23542271 | X | 6278294..6278521 | 260..487 | 570 | 83.3 | Plus |
X | 23542271 | X | 6278522..6278748 | 260..486 | 565 | 83.3 | Plus |
X | 23542271 | X | 6277838..6278065 | 260..487 | 555 | 82.9 | Plus |
X | 23542271 | X | 6278066..6278293 | 260..487 | 555 | 82.9 | Plus |
X | 23542271 | X | 6282957..6283184 | 260..487 | 540 | 82.5 | Plus |
X | 23542271 | X | 6282729..6282956 | 260..487 | 510 | 81.6 | Plus |
X | 23542271 | X | 6282501..6282728 | 260..487 | 480 | 80.7 | Plus |
X | 23542271 | X | 6282306..6282500 | 293..487 | 450 | 82.1 | Plus |
X | 23542271 | X | 6280764..6280882 | 368..486 | 220 | 79 | Plus |
Blast to na_te.dros performed on 2015-01-30 18:33:13 has no hits.
BO15611.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:01 Download gff for
BO15611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5271-PA | 1..471 | 15..486 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:26 Download gff for
BO15611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5271-PA | 1..471 | 15..486 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:59:32 Download gff for
BO15611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS27A-RA | 56..529 | 10..486 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:12:42 Download gff for
BO15611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS27A-RA | 56..529 | 10..486 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:12:42 Download gff for
BO15611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10409731..10410051 | 166..486 | 100 | -> | Minus |
2L | 10410241..10410393 | 10..165 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:59:32 Download gff for
BO15611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10409731..10410051 | 166..486 | 100 | -> | Minus |
arm_2L | 10410241..10410393 | 10..165 | 97 | | Minus |
BO15611.5prime Sequence
500 bp (500 high quality bases) assembled on 2006-05-30
> BO15611.5prime
GAAGTTATCAGTCGACATGCAGATCTTCGTTAAGACCCTCACGGGCAAGA
CCATCACTCTTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCC
AAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT
CGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAACATTC
AGAAGGAGTCCACTTTGCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAG
AAGCGCAAGAAGAAGAACTACTCCACTCCCAAGAAAATCAAGCACAAGAG
GAAGAAGGTCAAGCTAGCTGTCCTGAAATACTACAAGGTTGACGAGAACG
GCAAGATCCACCGTCTCCGTCGCGAGTGCCCTGGTGAGAACTGCGGCGCC
GGCGTCTTCATGGCTGCCCACGAAGATCGTCACTACTGCGGCAAGTGCAA
CCTGACCTTTGTCTTCAGCAAACCAGAGGAAAAGGCAAGCTTTCTAGACC
BO15611.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5271-PA | 471 | RpS27A-RA | 1..468 | 17..484 | 2340 | 100 | Plus |
CG2960-PA | 387 | RpL40-RA | 106..228 | 122..244 | 390 | 92.6 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 787..881 | 119..213 | 275 | 91.5 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 787..881 | 119..213 | 275 | 91.5 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 787..881 | 119..213 | 275 | 91.5 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 94..197 | 110..213 | 270 | 90.3 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 94..197 | 110..213 | 270 | 90.3 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 94..197 | 110..213 | 270 | 90.3 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 310..425 | 98..213 | 255 | 88.7 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 310..425 | 98..213 | 255 | 88.7 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 310..425 | 98..213 | 255 | 88.7 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1222..1337 | 98..213 | 230 | 87.9 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1222..1337 | 98..213 | 230 | 87.9 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1222..1337 | 98..213 | 230 | 87.9 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 559..653 | 119..213 | 225 | 89.4 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1015..1109 | 119..213 | 225 | 89.4 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1471..1565 | 119..213 | 225 | 89.4 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1699..1793 | 119..213 | 225 | 89.4 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 1927..2021 | 119..213 | 225 | 89.4 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 559..653 | 119..213 | 225 | 89.4 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1015..1109 | 119..213 | 225 | 89.4 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1471..1565 | 119..213 | 225 | 89.4 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1699..1793 | 119..213 | 225 | 89.4 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 1927..2021 | 119..213 | 225 | 89.4 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 559..653 | 119..213 | 225 | 89.4 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1015..1109 | 119..213 | 225 | 89.4 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1471..1565 | 119..213 | 225 | 89.4 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1699..1793 | 119..213 | 225 | 89.4 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 1927..2021 | 119..213 | 225 | 89.4 | Plus |
CG11624-PA | 2292 | Ubi-p63E-RA | 2155..2219 | 119..183 | 200 | 92.3 | Plus |
CG11624-PC | 2292 | Ubi-p63E-RC | 2155..2219 | 119..183 | 200 | 92.3 | Plus |
CG11624-PB | 2292 | Ubi-p63E-RB | 2155..2219 | 119..183 | 200 | 92.3 | Plus |
CG32744-PA | 1605 | CG32744-RA | 1140..1193 | 16..69 | 195 | 94.4 | Plus |
CG32744-PA | 1605 | CG32744-RA | 684..725 | 16..57 | 185 | 97.6 | Plus |
CG32744-PA | 1605 | CG32744-RA | 912..953 | 16..57 | 185 | 97.6 | Plus |
CG32744-PA | 1605 | CG32744-RA | 1368..1409 | 16..57 | 185 | 97.6 | Plus |
CG11700-PA | 906 | CG11700-RA | 1..41 | 17..57 | 180 | 97.5 | Plus |
CG32744-PA | 1605 | CG32744-RA | 456..497 | 16..57 | 160 | 95.2 | Plus |
CG32744-PA | 1605 | CG32744-RA | 82..152 | 98..168 | 155 | 88.7 | Plus |
CG32744-PA | 1605 | CG32744-RA | 228..281 | 16..69 | 145 | 90.7 | Plus |
CG32744-PA | 1605 | CG32744-RA | 10..42 | 26..58 | 140 | 96.9 | Plus |
CG32744-PA | 1605 | CG32744-RA | 313..380 | 101..168 | 140 | 88.2 | Plus |
CG11700-PA | 906 | CG11700-RA | 684..725 | 16..57 | 135 | 92.8 | Plus |
CG11700-PA | 906 | CG11700-RA | 228..269 | 16..57 | 135 | 92.8 | Plus |
CG11700-PA | 906 | CG11700-RA | 456..497 | 16..57 | 135 | 92.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:10:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS27A-RA | 592 | CG5271-RA | 56..523 | 17..484 | 2340 | 100 | Plus |
RpL40-RB | 659 | CG2960-RB | 123..350 | 17..244 | 705 | 87.8 | Plus |
RpL40-RA | 587 | CG2960-RA | 65..292 | 17..244 | 705 | 87.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:09:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10409731..10410053 | 17..339 | 1615 | 100 | Plus |
2L | 23513712 | 2L | 10410239..10410387 | 336..484 | 745 | 100 | Plus |
2L | 23513712 | 2L | 4228025..4228252 | 17..244 | 705 | 87.3 | Plus |
X | 23542271 | X | 6277382..6277609 | 243..16 | 585 | 83.8 | Minus |
X | 23542271 | X | 6277610..6277837 | 243..16 | 585 | 83.8 | Minus |
3L | 28110227 | 3L | 3900848..3901075 | 244..17 | 585 | 83.8 | Minus |
X | 23542271 | X | 6277149..6277381 | 248..16 | 580 | 83.3 | Minus |
X | 23542271 | X | 6278294..6278521 | 243..16 | 570 | 83.3 | Minus |
X | 23542271 | X | 6278522..6278748 | 243..17 | 565 | 83.3 | Minus |
X | 23542271 | X | 6277838..6278065 | 243..16 | 555 | 82.9 | Minus |
X | 23542271 | X | 6278066..6278293 | 243..16 | 555 | 82.9 | Minus |
X | 23542271 | X | 6282957..6283184 | 243..16 | 540 | 82.5 | Minus |
X | 23542271 | X | 6282729..6282956 | 243..16 | 510 | 81.6 | Minus |
X | 23542271 | X | 6282501..6282728 | 243..16 | 480 | 80.7 | Minus |
X | 23542271 | X | 6282306..6282500 | 210..16 | 450 | 82.1 | Minus |
X | 23542271 | X | 6280764..6280882 | 135..17 | 220 | 79 | Minus |
Blast to na_te.dros performed on 2015-02-11 13:10:01 has no hits.
BO15611.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:02 Download gff for
BO15611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5271-PA | 1..471 | 17..488 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:27 Download gff for
BO15611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5271-PA | 1..471 | 17..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:07:29 Download gff for
BO15611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS27A-RA | 56..529 | 17..493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:43:01 Download gff for
BO15611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS27A-RA | 56..529 | 17..493 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:43:01 Download gff for
BO15611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
2L | 10410241..10410393 | 338..493 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:07:29 Download gff for
BO15611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
arm_2L | 10410241..10410393 | 338..493 | 97 | | Plus |
BO15611.complete Sequence
502 bp (502 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633515
> BO15611.complete
GAAGTTATCAGTCGACATGCAGATCTTCGTTAAGACCCTCACGGGCAAGA
CCATCACTCTTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCC
AAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT
CGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAACATTC
AGAAGGAGTCCACTTTGCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAG
AAGCGCAAGAAGAAGAACTACTCCACTCCCAAGAAAATCAAGCACAAGAG
GAAGAAGGTCAAGCTAGCTGTCCTGAAATACTACAAGGTTGACGAGAACG
GCAAGATCCACCGTCTCCGTCGCGAGTGCCCTGGTGAGAACTGCGGCGCC
GGCGTCTTCATGGCTGCCCACGAAGATCGTCACTACTGCGGCAAGTGCAA
CCTGACCTTTGTCTTCAGCAAACCAGAGGAAAAGGCAAGCTTTCTAGACC
AT
BO15611.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:50:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS27A-RA | 471 | CG5271-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
RpL40-RB | 387 | CG2960-PB | 1..228 | 17..244 | 705 | 87.3 | Plus |
RpL40-RA | 387 | CG2960-PA | 1..228 | 17..244 | 705 | 87.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:50:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS27A-RA | 592 | CG5271-RA | 56..523 | 17..484 | 2340 | 100 | Plus |
RpL40-RB | 659 | CG2960-RB | 123..350 | 17..244 | 705 | 87.3 | Plus |
RpL40-RA | 587 | CG2960-RA | 65..292 | 17..244 | 705 | 87.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:50:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10409731..10410053 | 17..339 | 1615 | 100 | Plus |
2L | 23513712 | 2L | 10410239..10410387 | 336..484 | 745 | 100 | Plus |
2L | 23513712 | 2L | 4228025..4228252 | 17..244 | 705 | 87.3 | Plus |
X | 23542271 | X | 6277382..6277609 | 243..16 | 585 | 83.8 | Minus |
X | 23542271 | X | 6277610..6277837 | 243..16 | 585 | 83.8 | Minus |
3L | 28110227 | 3L | 3900848..3901075 | 244..17 | 585 | 83.8 | Minus |
3L | 28110227 | 3L | 3901304..3901531 | 244..17 | 585 | 83.8 | Minus |
X | 23542271 | X | 6277149..6277381 | 248..16 | 580 | 83.3 | Minus |
X | 23542271 | X | 6278294..6278521 | 243..16 | 570 | 83.3 | Minus |
3L | 28110227 | 3L | 3900392..3900619 | 244..17 | 570 | 83.3 | Minus |
3L | 28110227 | 3L | 3901532..3901759 | 244..17 | 570 | 83.3 | Minus |
X | 23542271 | X | 6278522..6278748 | 243..17 | 565 | 83.3 | Minus |
X | 23542271 | X | 6277838..6278065 | 243..16 | 555 | 82.9 | Minus |
X | 23542271 | X | 6278066..6278293 | 243..16 | 555 | 82.9 | Minus |
3L | 28110227 | 3L | 3899708..3899935 | 244..17 | 555 | 82.9 | Minus |
3L | 28110227 | 3L | 3899936..3900163 | 244..17 | 555 | 82.9 | Minus |
3L | 28110227 | 3L | 3900164..3900391 | 244..17 | 555 | 82.9 | Minus |
3L | 28110227 | 3L | 3900620..3900847 | 244..17 | 555 | 82.9 | Minus |
3L | 28110227 | 3L | 3901076..3901303 | 244..17 | 555 | 82.9 | Minus |
X | 23542271 | X | 6282957..6283184 | 243..16 | 540 | 82.5 | Minus |
3L | 28110227 | 3L | 3899484..3899707 | 240..17 | 535 | 82.6 | Minus |
X | 23542271 | X | 6282729..6282956 | 243..16 | 510 | 81.6 | Minus |
X | 23542271 | X | 6282501..6282728 | 243..16 | 480 | 80.7 | Minus |
X | 23542271 | X | 6282306..6282500 | 210..16 | 450 | 82.1 | Minus |
X | 23542271 | X | 6280764..6280882 | 135..17 | 220 | 79 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:50:30 has no hits.
BO15611.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 14:13:54 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-11 05:32:37 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:26:58 Download gff for
BO15611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS27A-RA | 56..523 | 17..486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 14:13:54 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:05:47 Download gff for
BO15611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS27A-RA | 56..523 | 17..486 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:05:47 Download gff for
BO15611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
2L | 10410241..10410387 | 338..486 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:26:58 Download gff for
BO15611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
arm_2L | 10410241..10410387 | 338..486 | 98 | | Plus |
BO15611.pep Sequence
Translation from 16 to 502
> BO15611.pep
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKL
AVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVF
SKPEEKASFLDH
BO15611.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS27A-PA | 156 | CG5271-PA | 1..156 | 1..156 | 819 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 457..533 | 1..77 | 385 | 100 | Plus |
Ubi-p5E-PA | 534 | CG32744-PA | 457..533 | 1..77 | 385 | 100 | Plus |
RpL40-PB | 128 | CG2960-PB | 1..76 | 1..76 | 381 | 100 | Plus |
RpL40-PA | 128 | CG2960-PA | 1..76 | 1..76 | 381 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 1..76 | 1..76 | 381 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 77..152 | 1..76 | 381 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 153..228 | 1..76 | 381 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 229..304 | 1..76 | 381 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 305..380 | 1..76 | 381 | 100 | Plus |
Ubi-p5E-PB | 534 | CG32744-PB | 381..456 | 1..76 | 381 | 100 | Plus |