Clone BO15616 Report

Search the DGRC for BO15616

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG13284-RB
Protein status:BO15616.pep: validated full length
Sequenced Size:1051

Clone Sequence Records

BO15616.complete Sequence

1051 bp (1051 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633517

> BO15616.complete
GAAGTTATCAGTCGACATGCAGCCAGTTCTGGAAGTGAGCATTTACACCC
TGCTGAAGATGGCGTTCATTTGGCAGCTGATCTCGGCGGCCATCTACCTC
GTAGGACTGCTCACCATCGGTGTGTTTCTGTACGACAACCTGAAGTCATT
GGTCAGCATAATCAAGGCCGTCCTGGAACCCTACTTCCAGCCCCACTTGC
CAAGGACATTGGTGGATAAGTTCGGACAGTGGGCAGTGGTGACTGGAGCC
ACCGATGGCATTGGCAAGGAGTACGCCAGGGAGCTGGCTCGCCAGGGTAT
CAACCTGGTGCTCATCTCGCGGACGAAGGAGAAGCTCATTGCGGTTACCA
ATGAGATTGAGAGCCAGTACAAAGTGAAGACCAAGTGGATTGCAGCGGAT
TTCGCCAAGGGACGTGAGGTGTACGATCAGATCGAAAAGGAACTGGCGGG
CATAGACGTTGGCATTTTGGTCAACAACGTGGGCATGATGTATGAGCACC
CCGAGAGTCTGGACCTGGTCTCAGAGGATCTTCTTTGGAACCTTCTTACC
GTCAACATGGGATCGGTTACCATGCTCACCCGCAAGATCCTGCCCCAGAT
GATTGGTCGCCGAAAGGGCGCCATTGTCAATCTGGGATCCTCCTCTGAGC
TCCAGCCACTGCCCAACATGACCGTCTATGCTGCGAGCAAGAAGTTTGTC
ACCTACTTCTCCAAGGCCCTGGAACTGGAGGTGGCGGAGCACAATATCCA
CGTGCAGCTGGTGATGCCCAACTTTGTGGTGACCAAAATGAATGCCTACA
CCGATCGGGTAATGCAGGGAGGTCTGTTTTTCCCGAACGCATACACTTTT
GCCCGGTCCGCCGTATTTACACTGGGAAAAACGAGCGAGACCAACGGTTT
CTGGACCCATGGCATTCAGTATGCCATTATGAAATTGGCTCCCCTGCCGA
TCCGCACATACTTGGGACACCAACTGTTCAAACGACTGAGAATCGAGGCC
CTCGAGCAAAAGCAAAAGAAACTGAAGCTTACTGCAAGCTTTCTAGACCA
T

BO15616.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-RD 1020 CG13284-PD 1..1017 17..1033 5085 100 Plus
CG13284-RB 1020 CG13284-PB 1..1017 17..1033 5085 100 Plus
CG13284-RC 1017 CG13284-PC 3..1014 22..1033 5060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-RD 2178 CG13284-RD 227..1244 16..1033 5090 100 Plus
CG13284-RB 1316 CG13284-RB 227..1244 16..1033 5090 100 Plus
CG13284-RC 1676 CG13284-RC 593..1604 22..1033 5060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16843513..16843962 919..470 2250 100 Minus
2L 23513712 2L 16846751..16846971 236..16 1105 100 Minus
2L 23513712 2L 16849410..16849778 904..536 810 81.3 Minus
2L 23513712 2L 16853968..16854336 904..536 810 81.3 Minus
2L 23513712 2L 16844679..16844803 359..235 625 100 Minus
2L 23513712 2L 16843281..16843397 1033..917 585 100 Minus
2L 23513712 2L 16844509..16844620 470..359 560 100 Minus
2L 23513712 2L 16850158..16850282 359..235 295 82.4 Minus
2L 23513712 2L 16854716..16854840 359..235 295 82.4 Minus
2L 23513712 2L 16849984..16850093 470..361 250 81.8 Minus
2L 23513712 2L 16854542..16854651 470..361 250 81.8 Minus
2L 23513712 2L 16849173..16849264 1008..917 190 80.4 Minus
Blast to na_te.dros performed on 2014-11-27 15:37:28 has no hits.

BO15616.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:14 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 1..1020 17..1034 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:18 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 225..1248 16..1041 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:48 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 228..1244 17..1035 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:14 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 225..1248 16..1041 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:21 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 228..1244 17..1035 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:21 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16846751..16846970 17..236 100   Minus
2L 16843279..16843394 920..1035 98 <- Minus
2L 16843513..16843961 471..919 100 <- Minus
2L 16844509..16844619 360..470 100 <- Minus
2L 16844679..16844801 237..359 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:48 Download gff for BO15616.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16843279..16843394 920..1035 98 <- Minus
arm_2L 16843513..16843961 471..919 100 <- Minus
arm_2L 16844509..16844619 360..470 100 <- Minus
arm_2L 16844679..16844801 237..359 100 <- Minus
arm_2L 16846751..16846970 17..236 100   Minus

BO15616.pep Sequence

Translation from 16 to 1051

> BO15616.pep
MQPVLEVSIYTLLKMAFIWQLISAAIYLVGLLTIGVFLYDNLKSLVSIIK
AVLEPYFQPHLPRTLVDKFGQWAVVTGATDGIGKEYARELARQGINLVLI
SRTKEKLIAVTNEIESQYKVKTKWIAADFAKGREVYDQIEKELAGIDVGI
LVNNVGMMYEHPESLDLVSEDLLWNLLTVNMGSVTMLTRKILPQMIGRRK
GAIVNLGSSSELQPLPNMTVYAASKKFVTYFSKALELEVAEHNIHVQLVM
PNFVVTKMNAYTDRVMQGGLFFPNAYTFARSAVFTLGKTSETNGFWTHGI
QYAIMKLAPLPIRTYLGHQLFKRLRIEALEQKQKKLKLTASFLDH

BO15616.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:49:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-PD 339 CG13284-PD 1..339 1..339 1716 100 Plus
CG13284-PB 339 CG13284-PB 1..339 1..339 1716 100 Plus
CG13284-PC 338 CG13284-PC 2..338 3..339 1706 100 Plus
CG13284-PE 325 CG13284-PE 1..325 15..339 1649 100 Plus
CG13284-PA 325 CG13284-PA 1..325 15..339 1649 100 Plus