BO15616.complete Sequence
1051 bp (1051 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633517
> BO15616.complete
GAAGTTATCAGTCGACATGCAGCCAGTTCTGGAAGTGAGCATTTACACCC
TGCTGAAGATGGCGTTCATTTGGCAGCTGATCTCGGCGGCCATCTACCTC
GTAGGACTGCTCACCATCGGTGTGTTTCTGTACGACAACCTGAAGTCATT
GGTCAGCATAATCAAGGCCGTCCTGGAACCCTACTTCCAGCCCCACTTGC
CAAGGACATTGGTGGATAAGTTCGGACAGTGGGCAGTGGTGACTGGAGCC
ACCGATGGCATTGGCAAGGAGTACGCCAGGGAGCTGGCTCGCCAGGGTAT
CAACCTGGTGCTCATCTCGCGGACGAAGGAGAAGCTCATTGCGGTTACCA
ATGAGATTGAGAGCCAGTACAAAGTGAAGACCAAGTGGATTGCAGCGGAT
TTCGCCAAGGGACGTGAGGTGTACGATCAGATCGAAAAGGAACTGGCGGG
CATAGACGTTGGCATTTTGGTCAACAACGTGGGCATGATGTATGAGCACC
CCGAGAGTCTGGACCTGGTCTCAGAGGATCTTCTTTGGAACCTTCTTACC
GTCAACATGGGATCGGTTACCATGCTCACCCGCAAGATCCTGCCCCAGAT
GATTGGTCGCCGAAAGGGCGCCATTGTCAATCTGGGATCCTCCTCTGAGC
TCCAGCCACTGCCCAACATGACCGTCTATGCTGCGAGCAAGAAGTTTGTC
ACCTACTTCTCCAAGGCCCTGGAACTGGAGGTGGCGGAGCACAATATCCA
CGTGCAGCTGGTGATGCCCAACTTTGTGGTGACCAAAATGAATGCCTACA
CCGATCGGGTAATGCAGGGAGGTCTGTTTTTCCCGAACGCATACACTTTT
GCCCGGTCCGCCGTATTTACACTGGGAAAAACGAGCGAGACCAACGGTTT
CTGGACCCATGGCATTCAGTATGCCATTATGAAATTGGCTCCCCTGCCGA
TCCGCACATACTTGGGACACCAACTGTTCAAACGACTGAGAATCGAGGCC
CTCGAGCAAAAGCAAAAGAAACTGAAGCTTACTGCAAGCTTTCTAGACCA
T
BO15616.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:37:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13284-RD | 1020 | CG13284-PD | 1..1017 | 17..1033 | 5085 | 100 | Plus |
CG13284-RB | 1020 | CG13284-PB | 1..1017 | 17..1033 | 5085 | 100 | Plus |
CG13284-RC | 1017 | CG13284-PC | 3..1014 | 22..1033 | 5060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:37:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13284-RD | 2178 | CG13284-RD | 227..1244 | 16..1033 | 5090 | 100 | Plus |
CG13284-RB | 1316 | CG13284-RB | 227..1244 | 16..1033 | 5090 | 100 | Plus |
CG13284-RC | 1676 | CG13284-RC | 593..1604 | 22..1033 | 5060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:37:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16843513..16843962 | 919..470 | 2250 | 100 | Minus |
2L | 23513712 | 2L | 16846751..16846971 | 236..16 | 1105 | 100 | Minus |
2L | 23513712 | 2L | 16849410..16849778 | 904..536 | 810 | 81.3 | Minus |
2L | 23513712 | 2L | 16853968..16854336 | 904..536 | 810 | 81.3 | Minus |
2L | 23513712 | 2L | 16844679..16844803 | 359..235 | 625 | 100 | Minus |
2L | 23513712 | 2L | 16843281..16843397 | 1033..917 | 585 | 100 | Minus |
2L | 23513712 | 2L | 16844509..16844620 | 470..359 | 560 | 100 | Minus |
2L | 23513712 | 2L | 16850158..16850282 | 359..235 | 295 | 82.4 | Minus |
2L | 23513712 | 2L | 16854716..16854840 | 359..235 | 295 | 82.4 | Minus |
2L | 23513712 | 2L | 16849984..16850093 | 470..361 | 250 | 81.8 | Minus |
2L | 23513712 | 2L | 16854542..16854651 | 470..361 | 250 | 81.8 | Minus |
2L | 23513712 | 2L | 16849173..16849264 | 1008..917 | 190 | 80.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:37:28 has no hits.
BO15616.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:14 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13284-RB | 1..1020 | 17..1034 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:18 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13284-RB | 225..1248 | 16..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:48 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13284-RB | 228..1244 | 17..1035 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:14 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13284-RB | 225..1248 | 16..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:21 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13284-RB | 228..1244 | 17..1035 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:21 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16846751..16846970 | 17..236 | 100 | | Minus |
2L | 16843279..16843394 | 920..1035 | 98 | <- | Minus |
2L | 16843513..16843961 | 471..919 | 100 | <- | Minus |
2L | 16844509..16844619 | 360..470 | 100 | <- | Minus |
2L | 16844679..16844801 | 237..359 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:48 Download gff for
BO15616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16843279..16843394 | 920..1035 | 98 | <- | Minus |
arm_2L | 16843513..16843961 | 471..919 | 100 | <- | Minus |
arm_2L | 16844509..16844619 | 360..470 | 100 | <- | Minus |
arm_2L | 16844679..16844801 | 237..359 | 100 | <- | Minus |
arm_2L | 16846751..16846970 | 17..236 | 100 | | Minus |
BO15616.pep Sequence
Translation from 16 to 1051
> BO15616.pep
MQPVLEVSIYTLLKMAFIWQLISAAIYLVGLLTIGVFLYDNLKSLVSIIK
AVLEPYFQPHLPRTLVDKFGQWAVVTGATDGIGKEYARELARQGINLVLI
SRTKEKLIAVTNEIESQYKVKTKWIAADFAKGREVYDQIEKELAGIDVGI
LVNNVGMMYEHPESLDLVSEDLLWNLLTVNMGSVTMLTRKILPQMIGRRK
GAIVNLGSSSELQPLPNMTVYAASKKFVTYFSKALELEVAEHNIHVQLVM
PNFVVTKMNAYTDRVMQGGLFFPNAYTFARSAVFTLGKTSETNGFWTHGI
QYAIMKLAPLPIRTYLGHQLFKRLRIEALEQKQKKLKLTASFLDH
BO15616.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13284-PD | 339 | CG13284-PD | 1..339 | 1..339 | 1716 | 100 | Plus |
CG13284-PB | 339 | CG13284-PB | 1..339 | 1..339 | 1716 | 100 | Plus |
CG13284-PC | 338 | CG13284-PC | 2..338 | 3..339 | 1706 | 100 | Plus |
CG13284-PE | 325 | CG13284-PE | 1..325 | 15..339 | 1649 | 100 | Plus |
CG13284-PA | 325 | CG13284-PA | 1..325 | 15..339 | 1649 | 100 | Plus |