Clone BO15625 Report

Search the DGRC for BO15625

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG13599-RA
Protein status:BO15625.pep: validated full length
Sequenced Size:919

Clone Sequence Records

BO15625.3prime Sequence

870 bp (772 high quality bases) assembled on 2006-06-02

> BO15625.3prime
ATGGTCTAGAAAGCTTGCGCTAGACCACAAATCTCCCGATTTTTGGTTGC
CAGGAGCTCTGAAACCGCGAACTATGACCTCGGCCTGCCACCAACCGCTG
GTTTCATTTGCTGCTTTCAAAACGTCATGCTCTTCGTTGGTCTGGCTAAC
GTCTTCCCCAGATTTATCCAGATTCCGCACGCCAAGATCGTGGTAAATAT
CCATCTCCTTGCAGCAGCGTAATTCATTCGGTGTGTTTTCACTGCAATGC
AGTAGATGCAGGTGTATGTTCTTGCAGCTGCGCGGAAGTTGGCTTAATAT
ATGCTTTGGGATTAGATTAAAGGAGTCACAATGGGATCCTTGGGGTCGAT
CGGAGTCTGTAAGGAGCTCCATTTCTAGAAACACGTTGGTGACTTTTAGT
TCGGTGGAGAATAGCCTGTACAGCTCCTCGCAGGTGAGCAGGCGGAGCAG
CGCCTGGTTGATGCGACCTTCGGGCAGAGCATGGTGCTCGCAATAGTGAT
CTCTGGATATGGAATCATGTGGTATGTGCAGAGTATAGGCCTCCGAGGGC
ATGAACATATTGTTGCCAAAAAGAAATCGCAGGCTCTTCACTTCAGAGCT
CCTGAAGGCTTGTCGGATGATCTCTCTCATGTCACTAATAGATTCCTTGG
TGGCCTTTGCCTTAGAGCGCTGCTGGTTGCGTTGGTAATGAGCAAAGGAC
TCCTGATCCTTGGATTCTCCCGATTCATCAGCATCTGACCATTTATCCAC
ATAATATTTGTATGTTTTGTACACGAAAGGGATTTGCCGGCGTTGATAGA
GACAGAAGTCCAGGATGCCATTCACGAACTCCGCTGTTGTCCCACTGGTC
AGAACCTCAATGTTATCCAG

BO15625.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-PA 888 CG13599-RA 34..885 870..19 4185 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 1029 CG13599-RA 108..959 870..19 4215 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23932054..23932658 623..19 3025 100 Minus
3R 32079331 3R 23931746..23931994 870..622 1200 98.8 Minus
Blast to na_te.dros performed on 2015-02-03 07:10:48 has no hits.

BO15625.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:10 Download gff for BO15625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-PA 34..888 15..870 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:36 Download gff for BO15625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-PA 34..888 15..870 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:36:14 Download gff for BO15625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 108..966 10..870 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:42:37 Download gff for BO15625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 108..966 10..870 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:42:37 Download gff for BO15625.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23931746..23931994 622..870 98 -> Minus
3R 23932056..23932665 10..621 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:14 Download gff for BO15625.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19757468..19757716 622..870 98 -> Minus
arm_3R 19757778..19758387 10..621 99   Minus

BO15625.5prime Sequence

918 bp (816 high quality bases) assembled on 2006-05-30

> BO15625.5prime
GAAGTTATCAGTCGACATGGATCAAAATGTCAAGAATGTTGATCTTAAAC
TGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGTGAAT
GGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCGTGTA
CAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAATCGG
GAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCAGCAG
CGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAGAGAT
CATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTTCTTT
TTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACATACCA
CATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGCCCGA
AGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAGCTGT
ACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGAAATG
GAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACTCCTT
TAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGCAAGA
ACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGAATTA
CGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGAATCT
GGATAAATCTGGGGAAGACGTTAGCCAGACCAACGAAGAGCATGACGTTT
TGAAAGCAGCAAATGAAAACAGCGGGTGGTGGCAGGCCGAGGTCATAGTT
CGCGGTTTCAGAGCTCCTGNCAACCAAAAATCGGGAGATTTGTGGTCTAG
CGCAAGCTTTCTAGACAT

BO15625.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-PA 888 CG13599-RA 1..885 17..901 4356 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 1029 CG13599-RA 75..959 17..901 4384 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23932054..23932658 297..901 2984 99.5 Plus
3R 32079331 3R 23931713..23931994 17..298 1410 100 Plus
Blast to na_te.dros performed on 2015-02-11 13:10:48 has no hits.

BO15625.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:11 Download gff for BO15625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-PA 1..888 17..905 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:38 Download gff for BO15625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-PA 1..888 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:07:42 Download gff for BO15625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 75..966 17..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:44:50 Download gff for BO15625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 75..966 17..910 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:44:50 Download gff for BO15625.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23931713..23931994 17..298 100 -> Plus
3R 23932056..23932665 299..910 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:07:42 Download gff for BO15625.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19757435..19757716 17..298 100 -> Plus
arm_3R 19757778..19758387 299..910 98   Plus

BO15625.complete Sequence

919 bp (919 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633520

> BO15625.complete
GAAGTTATCAGTCGACATGGATCAAAATGTCAAGAATGTTGATCTTAAAC
TGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGTGAAT
GGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCGTGTA
CAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAATCGG
GAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCAGCAG
CGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAGAGAT
CATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTTCTTT
TTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACATACCA
CATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGCCCGA
AGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAGCTGT
ACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGAAATG
GAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACTCCTT
TAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGCAAGA
ACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGAATTA
CGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGAATCT
GGATAAATCTGGGGAAGACGTTAGCCAGACCAACGAAGAGCATGACGTTT
TGAAAGCAGCAAATGAAACCAGCGGTTGGTGGCAGGCCGAGGTCATAGTT
CGCGGTTTCAGAGCTCCTGGCAACCAAAAATCGGGAGATTTGTGGTCTAG
CGCAAGCTTTCTAGACCAT

BO15625.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 888 CG13599-PA 1..885 17..901 4425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 1029 CG13599-RA 75..959 17..901 4425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:56:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23932054..23932658 297..901 3025 100 Plus
3R 32079331 3R 23931713..23931994 17..298 1410 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:56:52 has no hits.

BO15625.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:01 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 1..888 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:57 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 71..962 17..910 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:04 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 75..959 17..903 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:01 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 71..962 17..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:23 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 75..959 17..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:23 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23931713..23931994 17..298 100 -> Plus
3R 23932056..23932658 299..903 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:04 Download gff for BO15625.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19757435..19757716 17..298 100 -> Plus
arm_3R 19757778..19758380 299..903 99   Plus

BO15625.pep Sequence

Translation from 16 to 919

> BO15625.pep
MDQNVKNVDLKLDNIEVLTSGTTAEFVNGILDFLLYQRRQIPFVYKTYKY
YVDKWSDADESGESKDQESFAHYQRNQQRSKAKATKESISDMREIIRQAF
RSSEVKSLRFLFGNNMFMPSEAYTLHIPHDSISRDHYCEHHALPEGRINQ
ALLRLLTCEELYRLFSTELKVTNVFLEMELLTDSDRPQGSHCDSFNLIPK
HILSQLPRSCKNIHLHLLHCSENTPNELRCCKEMDIYHDLGVRNLDKSGE
DVSQTNEEHDVLKAANETSGWWQAEVIVRGFRAPGNQKSGDLWSSASFLD
H

BO15625.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:50:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-PA 295 CG13599-PA 1..295 1..295 1566 100 Plus