BO15627.complete Sequence
979 bp (979 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633522
> BO15627.complete
GAAGTTATCAGTCGACATGAGTGCACATACAGTTGCGATGATGATGCTAC
ACCCCACACCCGACCAGCGCGTGAGCATCCGCGAGGAGCTGCGTGAGCCG
GAGGACCCCGCAGACATTGAGCGCGACATCAAGCTGATTCGCGAGTGGCT
GGAGACACAGCCGCACCTGCCCAAGGACATGGACGACATGCGCCTCACGA
CCTTCCTGCGCGGCTGCAAGTTCAGCCTGGAGAAGGTGAAGAAAAAGCTG
GACATGTACTACACCATGCGCAACGCGGTGCCAGAGTTCTTCTCCAACCG
GGACATCAATCGGGAGGAACTAAACATCGTACTGGACTATGTGCACTGCC
CGACTCTCCCGGGGATTACGCCCAATGGACGCCGCATCACGTTCATCCGG
GGTATCGATTGCGACTTCCAGCCCCACCACATCCTGGACGCCATGAAGGT
GGCCCTGATGATCGGGGACGTGCGCCTGGCGGAGGAGAGCGTCGGCATCG
CCGGCGACATCTTCATCCTGGACGCGTCGGTGGCCAGCGCCGCCCACTTC
GCCAAGTTCTCGCCCACCGTGGTGAAGAAGTTCCTGATCGCCGTGCAAGA
GGCCTATCCCGTGAAGGTGAAGGAGGTGCATGTGATCAACATCTCGCCGC
TGGTGGACACTATCTTCAACTTTGTGAAGCCGTTCGTGAAGGAGAAGATC
CGCAGCCGCATAACCTTCCACAACGACGTGGAGAGTCTCTACAAGGTGGT
GCCCCGTGACCTCCTGCCCAACGAGTACGGCGGCAAGGCCGGCGGCGTCG
TCGAGCTGAACCAGTGGTGGAAGCAGAAGCTGGTCGACAACACCCAGTGG
TTCAAGGACCAGGAGGACAAGAAGGCGAACGAGTCCCTTCGCCCCGGCGC
TCCCAAGACCAGCGATGACCTCTTCGGCATGGAGGGCACCTTCCGGCAGC
TGAACATCGACGCAAGCTTTCTAGACCAT
BO15627.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2663-RC | 927 | CG2663-PC | 1..924 | 38..961 | 4620 | 100 | Plus |
| CG2663-RA | 927 | CG2663-PA | 1..924 | 38..961 | 4620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:47:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2663-RC | 1645 | CG2663-RC | 469..1414 | 16..961 | 4730 | 100 | Plus |
| CG2663-RA | 1287 | CG2663-RA | 132..1056 | 37..961 | 4625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:47:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5400825..5401443 | 961..343 | 3095 | 100 | Minus |
| 3R | 32079331 | 3R | 5401506..5401812 | 343..37 | 1535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:47:56 has no hits.
BO15627.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:02 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2663-RB | 1..948 | 17..962 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:59 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2663-RB | 453..1413 | 5..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:23:01 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2663-RB | 464..1408 | 17..963 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:02 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2663-RB | 453..1413 | 5..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:07 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2663-RC | 470..1414 | 17..963 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:07 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5400823..5401443 | 343..963 | 99 | <- | Minus |
| 3R | 5401507..5401811 | 38..342 | 100 | <- | Minus |
| 3R | 5403516..5403536 | 17..37 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:23:01 Download gff for
BO15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1226545..1227165 | 343..963 | 99 | <- | Minus |
| arm_3R | 1227229..1227533 | 38..342 | 100 | <- | Minus |
| arm_3R | 1229238..1229258 | 17..37 | 100 | | Minus |
BO15627.pep Sequence
Translation from 16 to 979
> BO15627.pep
MSAHTVAMMMLHPTPDQRVSIREELREPEDPADIERDIKLIREWLETQPH
LPKDMDDMRLTTFLRGCKFSLEKVKKKLDMYYTMRNAVPEFFSNRDINRE
ELNIVLDYVHCPTLPGITPNGRRITFIRGIDCDFQPHHILDAMKVALMIG
DVRLAEESVGIAGDIFILDASVASAAHFAKFSPTVVKKFLIAVQEAYPVK
VKEVHVINISPLVDTIFNFVKPFVKEKIRSRITFHNDVESLYKVVPRDLL
PNEYGGKAGGVVELNQWWKQKLVDNTQWFKDQEDKKANESLRPGAPKTSD
DLFGMEGTFRQLNIDASFLDH
BO15627.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2663-PC | 308 | CG2663-PC | 1..308 | 8..315 | 1618 | 100 | Plus |
| CG2663-PA | 308 | CG2663-PA | 1..308 | 8..315 | 1618 | 100 | Plus |
| CG12926-PA | 313 | CG12926-PA | 26..313 | 29..315 | 510 | 37.4 | Plus |
| CG33966-PA | 310 | CG33966-PA | 8..310 | 14..315 | 505 | 35.1 | Plus |
| CG33514-PA | 311 | CG33514-PA | 9..311 | 14..315 | 496 | 35.2 | Plus |
