Clone Sequence Records
BO15633.5prime Sequence
548 bp (548 high quality bases) assembled on 2006-05-30
> BO15633.5prime
GAAGTTATCAGTCGACATGTCAGCCAAATATACACTGATCTTTGCCCTGG
CGGCTCTCTGCTGTCTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGC
CGAGTTCTCAGCTCTCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGA
CAACAAGGAAGACTCCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCC
AGGAGCAGGAGGAGCAGAATGACAGACTGGAGGGACGCAGCGATGATGTT
GCCGAGGGCAGCGACAACAAAGAGGACAAGGAGACCGCCACCAACAACAA
GGACACCATCGTGAAGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCG
TTCGTGCCGGTCGTCGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGT
CGTCGTAGTGCACGCAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACG
CAGGCGCGGTGGACGACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCG
TGAAGAGGCGTTCCGGCAAGGGCAACAAGGCCGCAAGCTTTCTAGACC
BO15633.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-PA | 519 | CG31813-RA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 10:51:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 893 | CG31813-RB | 52..571 | 13..532 | 2585 | 99.8 | Plus |
CG31813-RA | 653 | CG31813-RA | 52..571 | 13..532 | 2585 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 10:50:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13736189..13736708 | 13..532 | 2585 | 99.8 | Plus |
Blast to na_te.dros performed 2015-02-09 10:51:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 170..125 | 113 | 71.7 | Minus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 477..345 | 106 | 55.7 | Minus |
BO15633.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:17 Download gff for
BO15633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-PA | 1..519 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:46 Download gff for
BO15633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-PA | 1..519 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:38:19 Download gff for
BO15633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..575 | 9..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:40:07 Download gff for
BO15633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..575 | 9..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:40:07 Download gff for
BO15633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13736186..13736714 | 9..537 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:38:19 Download gff for
BO15633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13736186..13736714 | 9..537 | 98 | -> | Plus |
BO15633.3prime Sequence
548 bp (548 high quality bases) assembled on 2006-06-02
> BO15633.3prime
ATGGTCTAGAAAGCTTGCGGCCTTGTTGCCCTTGCCGGAACGCCTCTTCA
CGGAGGTGCGACGGCGAGCACCGCCACGACCACGTCGTCCACCGCGCCTG
CGTCCACCTCGTCGTCCGCCACGGCGCACGGATTTGCGTGCACTACGACG
ACCTCCACGGCGACCACCGCGGCGTCCACCACGACGACGACCGGCACGAA
CGATGCGGCGGGCACGGGCGTCATCCTTGTTGGGCTTCACGATGGTGTCC
TTGTTGTTGGTGGCGGTCTCCTTGTCCTCTTTGTTGTCGCTGCCCTCGGC
AACATCATCGCTGCGTCCCTCCAGTCTGTCATTCTGCTCCTCCTGCTCCT
GGCGCTCCAGGTCTTGCTCCTGGGCGGCCAGCTCGGAGTCTTCCTTGTTG
TCCGACGTCTTCTCGACCAGCTCGGAGCCACGGCGAGAGCTGAGAACTCG
GCTGCGCTGGGCCGCCGCCTCGGTGGAGAACACCAGACAGCAGAGAGCCG
CCAGGGCAAAGATCAGTGTATATTTGGCTGACATGTCGACTGATAACT
BO15633.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-PA | 519 | CG31813-RA | 1..516 | 534..19 | 2580 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:10:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 893 | CG31813-RB | 52..571 | 538..19 | 2585 | 99.8 | Minus |
CG31813-RA | 653 | CG31813-RA | 52..571 | 538..19 | 2585 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:10:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13736189..13736708 | 538..19 | 2585 | 99.8 | Minus |
Blast to na_te.dros performed 2015-02-12 18:10:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 381..426 | 113 | 71.7 | Plus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 74..206 | 106 | 55.7 | Plus |
BO15633.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:16 Download gff for
BO15633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-PA | 1..519 | 15..534 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:45 Download gff for
BO15633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-PA | 1..519 | 15..534 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:49:20 Download gff for
BO15633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..575 | 14..542 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:56:34 Download gff for
BO15633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..575 | 14..542 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:56:34 Download gff for
BO15633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13736186..13736714 | 14..542 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:20 Download gff for
BO15633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13736186..13736714 | 14..542 | 98 | -> | Minus |
BO15633.complete Sequence
550 bp (550 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633524
> BO15633.complete
GAAGTTATCAGTCGACATGTCAGCCAAATATACACTGATCTTTGCCCTGG
CGGCTCTCTGCTGTCTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGC
CGAGTTCTCAGCTCTCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGA
CAACAAGGAAGACTCCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCC
AGGAGCAGGAGGAGCAGAATGACAGACTGGAGGGACGCAGCGATGATGTT
GCCGAGGGCAGCGACAACAAAGAGGACAAGGAGACCGCCACCAACAACAA
GGACACCATCGTGAAGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCG
TTCGTGCCGGTCGTCGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGT
CGTCGTAGTGCACGCAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACG
CAGGCGCGGTGGACGACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCG
TGAAGAGGCGTTCCGGCAAGGGCAACAAGGCCGCAAGCTTTCTAGACCAT
BO15633.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:09:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 519 | CG31813-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
CG31813-RA | 519 | CG31813-PA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 893 | CG31813-RB | 52..571 | 13..532 | 2585 | 99.8 | Plus |
CG31813-RA | 653 | CG31813-RA | 52..571 | 13..532 | 2585 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:09:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13736189..13736708 | 13..532 | 2585 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 01:09:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 170..125 | 113 | 71.7 | Minus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 477..345 | 106 | 55.7 | Minus |
BO15633.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:03 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 1..519 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:00 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 47..573 | 9..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:42 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 56..571 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:03 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 47..573 | 9..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:07 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 56..571 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:07 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13736193..13736708 | 17..534 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:42 Download gff for
BO15633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13736193..13736708 | 17..534 | 99 | | Plus |
BO15633.pep Sequence
Translation from 16 to 550
> BO15633.pep
MSAKYTLIFALAALCCLVFSTEAAAQRSRVLSSRRGSELVEKTSDNKEDS
ELAAQEQDLERQEQEEQNDRLEGRSDDVAEGSDNKEDKETATNNKDTIVK
PNKDDARARRIVRAGRRRGGRRGGRRGGRRSARKSVRRGGRRGGRRRGGR
RGRGGARRRTSVKRRSGKGNKAASFLDH
BO15633.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-PB | 172 | CG31813-PB | 1..172 | 1..172 | 862 | 100 | Plus |
CG31813-PA | 172 | CG31813-PA | 1..172 | 1..172 | 862 | 100 | Plus |