Clone BO15636 Report

Search the DGRC for BO15636

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptJupiter-RC
Protein status:BO15636.pep: validated full length
Sequenced Size:625

Clone Sequence Records

BO15636.3prime Sequence

623 bp (493 high quality bases) assembled on 2006-06-02

> BO15636.3prime
ATGGTCTAAAAAGCTTGCCCACAGGCCCGACTAGTAGCCGCCTGGGGGAA
TGCGGTTCTTGTTGATCACCGGAGTGCCGCCATTGGACGACTCCTGGCGC
TGGGAATACTCGTTGGCTACGACCTTGTAGCCCTCGCCTGTGACGGGGTT
GCCCTCTGATCTCGAGCCACTGTTCATCTTGAGGTTCTCGGTGGAGGACG
ACACCGAAGACGAGGCCGAGGACACCGATCCGCTCTTGCCGTTGTAGTGG
CCATTGGTGGTCAGCAGCTTCTGGGCGGCAACGGCCTCTGTGTTCTGACC
AAAGGGAATGCTGCTCTTCATGTGGTTCTTGCCGGGGGTGATCGGGCGGG
TGGGCTCCCCAAACAGCCGAGAGTGGGAGTCGACGGTCTTCTGGCCGCGA
CGTGGTGCATCACCGTTGTTTTTCACTCCATTATCTTTCTCGGCAGCGAA
TATGTTGGACGCCATGCGATTCTTCACGTTCCTGGGGGTCTGCGGCGTCT
CCGATCCAAAGATGTCGCTCGATCCGCCGCCCGGGGGCCTCACCACCCTC
TTCTTTGCTTTGCCAACATTGTAAAGCTCATCGTGTTTGAAAGCAGCGTA
GGCGGCCATGTCGACTGATATCT

BO15636.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31363-PC 594 Jupiter-RC 1..591 609..19 2855 99.3 Minus
CG31363-PD 576 Jupiter-RD 50..573 542..19 2570 99.6 Minus
CG31363-PE 627 Jupiter-RE 229..624 414..19 1955 99.7 Minus
CG31363-PH 609 Jupiter-RH 211..606 414..19 1955 99.7 Minus
CG31363-PA 594 Jupiter-RA 50..436 542..156 1910 99.7 Minus
CG31363-PE 627 Jupiter-RE 1..196 609..414 905 98.4 Minus
CG31363-PB 558 Jupiter-RB 417..555 157..19 670 99.2 Minus
CG31363-PA 594 Jupiter-RA 455..591 155..19 660 99.2 Minus
CG31363-PH 609 Jupiter-RH 50..178 542..414 620 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:38:43
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RC 1581 CG31363-RC 206..796 609..19 2895 99.3 Minus
Jupiter-RD 1517 CG31363-RD 204..732 547..19 2600 99.4 Minus
Jupiter-RA 1535 CG31363-RA 204..750 547..19 2410 96.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:38:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11592367..11592625 156..414 1295 100 Plus
3R 32079331 3R 11591171..11591310 19..158 685 99.3 Plus
3R 32079331 3R 11593631..11593768 412..549 660 98.6 Plus
3R 32079331 3R 11604141..11604203 547..609 300 98.4 Plus
Blast to na_te.dros performed on 2015-01-31 10:38:39 has no hits.

BO15636.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:18 Download gff for BO15636.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PC 1..594 15..609 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:48 Download gff for BO15636.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PC 1..594 15..609 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:45 Download gff for BO15636.3prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 201..799 15..617 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:47 Download gff for BO15636.3prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 201..799 15..617 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:47 Download gff for BO15636.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11591172..11591307 20..155 99 <- Plus
3R 11592367..11592624 156..413 100 <- Plus
3R 11593633..11593766 414..547 98 <- Plus
3R 11604142..11604208 548..617 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:45 Download gff for BO15636.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416894..7417029 20..155 99 <- Plus
arm_3R 7418089..7418346 156..413 100 <- Plus
arm_3R 7419355..7419488 414..547 98 <- Plus
arm_3R 7429864..7429930 548..617 92   Plus

BO15636.5prime Sequence

623 bp (623 high quality bases) assembled on 2006-05-30

> BO15636.5prime
GAAGTTATCAGTCGACATGGCCGCCTACGCTGCTTTCAAACACGTTGAGC
TTTACAATGTTGGCAAAGCAAAGAAGAGGGTGCTGAGGCCCCCGGGCGGC
GGATCGAGCGACATCTTTGGATCGGAGATGCCGCAGACCCCCAGGAACGT
GAAGAATCGCATGGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAG
TGAAAAACAACGGTGATGCACCACGTCGCGGCCAGAAGACCGTCGACTCC
CACTCTCGGCTGTTTGGGGAGCCCACCCGCCCGATCACCCCCGGCAAGAA
CCACATGAAGAGCAGCATTCCCTTTGGTCAGAACACAGAGGCCGTTGCCG
CCCAGAAGCTGCTGACCACCAATGGCCACTACAACGGCAAGAGCGGATCG
GTGTCCTCGGCCTCGTCTTCGGTGTCGTCCTCCACCGAGAACCTCAAGAT
GAACAGTGGCTCGAGATCAGAGGGCAACCCCGTCACAGGCGAGGGCTACA
AGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGTCGTCCAATGGCGGC
ACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGCGGCTACTCGTCGGG
CCTGTGGGCAAGCTTTCTAGACC

BO15636.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG31363-PC 594 Jupiter-RC 1..591 17..607 2955 100 Plus
CG31363-PD 576 Jupiter-RD 45..573 79..607 2645 100 Plus
CG31363-PE 627 Jupiter-RE 229..624 212..607 1980 100 Plus
CG31363-PH 609 Jupiter-RH 211..606 212..607 1980 100 Plus
CG31363-PA 594 Jupiter-RA 45..436 79..470 1960 100 Plus
CG31363-PE 627 Jupiter-RE 1..196 17..212 980 100 Plus
CG31363-PB 558 Jupiter-RB 417..555 469..607 695 100 Plus
CG31363-PA 594 Jupiter-RA 455..591 471..607 685 100 Plus
CG31363-PH 609 Jupiter-RH 45..178 79..212 670 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RC 1581 CG31363-RC 206..796 17..607 2955 100 Plus
Jupiter-RD 1517 CG31363-RD 204..732 79..607 2645 100 Plus
Jupiter-RA 1535 CG31363-RA 204..750 79..607 2455 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:59:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11592367..11592625 470..212 1295 100 Minus
3R 32079331 3R 11591171..11591310 607..468 700 100 Minus
3R 32079331 3R 11593631..11593768 214..77 690 100 Minus
3R 32079331 3R 11604141..11604203 79..17 315 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:59:15 has no hits.

BO15636.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:19 Download gff for BO15636.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PC 1..594 17..611 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:49 Download gff for BO15636.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PC 1..594 17..611 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:43:36 Download gff for BO15636.5prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 201..799 9..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:05:47 Download gff for BO15636.5prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 201..799 9..611 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:05:47 Download gff for BO15636.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11604142..11604208 9..78 94   Minus
3R 11591168..11591307 471..611 98 <- Minus
3R 11592367..11592624 213..470 100 <- Minus
3R 11593633..11593766 79..212 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:43:36 Download gff for BO15636.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416890..7417029 471..611 98 <- Minus
arm_3R 7418089..7418346 213..470 100 <- Minus
arm_3R 7419355..7419488 79..212 100 <- Minus
arm_3R 7429864..7429930 9..78 94   Minus

BO15636.complete Sequence

625 bp (625 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633526

> BO15636.complete
GAAGTTATCAGTCGACATGGCCGCCTACGCTGCTTTCAAACACGTTGAGC
TTTACAATGTTGGCAAAGCAAAGAAGAGGGTGCTGAGGCCCCCGGGCGGC
GGATCGAGCGACATCTTTGGATCGGAGATGCCGCAGACCCCCAGGAACGT
GAAGAATCGCATGGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAG
TGAAAAACAACGGTGATGCACCACGTCGCGGCCAGAAGACCGTCGACTCC
CACTCTCGGCTGTTTGGGGAGCCCACCCGCCCGATCACCCCCGGCAAGAA
CCACATGAAGAGCAGCATTCCCTTTGGTCAGAACACAGAGGCCGTTGCCG
CCCAGAAGCTGCTGACCACCAATGGCCACTACAACGGCAAGAGCGGATCG
GTGTCCTCGGCCTCGTCTTCGGTGTCGTCCTCCACCGAGAACCTCAAGAT
GAACAGTGGCTCGAGATCAGAGGGCAACCCCGTCACAGGCGAGGGCTACA
AGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGTCGTCCAATGGCGGC
ACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGCGGCTACTCGTCGGG
CCTGTGGGCAAGCTTTCTAGACCAT

BO15636.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RC 594 CG31363-PC 1..591 17..607 2955 100 Plus
Jupiter-RD 576 CG31363-PD 45..573 79..607 2645 100 Plus
Jupiter-RA 594 CG31363-PA 45..591 79..607 2430 96.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RC 1581 CG31363-RC 206..796 17..607 2955 100 Plus
Jupiter-RD 1517 CG31363-RD 204..732 79..607 2645 100 Plus
Jupiter-RA 1535 CG31363-RA 204..750 79..607 2430 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11592367..11592625 470..212 1295 100 Minus
3R 32079331 3R 11591171..11591310 607..468 700 100 Minus
3R 32079331 3R 11593631..11593768 214..77 690 100 Minus
3R 32079331 3R 11604141..11604203 79..17 315 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:35:01 has no hits.

BO15636.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:04 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 1..594 17..611 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:52:59 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 203..793 17..609 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:30:49 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 206..796 17..609 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:05 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 198..796 9..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:44 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RC 206..796 17..609 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:44 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11591169..11591307 471..609 98 <- Minus
3R 11592367..11592624 213..470 100 <- Minus
3R 11593633..11593766 79..212 100 <- Minus
3R 11604142..11604203 17..78 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:30:49 Download gff for BO15636.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416891..7417029 471..609 98 <- Minus
arm_3R 7418089..7418346 213..470 100 <- Minus
arm_3R 7419355..7419488 79..212 100 <- Minus
arm_3R 7429864..7429925 17..78 100   Minus

BO15636.pep Sequence

Translation from 16 to 625

> BO15636.pep
MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQTPRNVKNRMA
SNIFAAEKDNGVKNNGDAPRRGQKTVDSHSRLFGEPTRPITPGKNHMKSS
IPFGQNTEAVAAQKLLTTNGHYNGKSGSVSSASSSVSSSTENLKMNSGSR
SEGNPVTGEGYKVVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLWASF
LDH

BO15636.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:50:24
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-PC 197 CG31363-PC 1..197 1..197 1025 100 Plus
Jupiter-PE 208 CG31363-PE 1..208 1..197 1003 94.7 Plus
Jupiter-PD 191 CG31363-PD 11..191 17..197 925 97.8 Plus
Jupiter-PA 197 CG31363-PA 11..197 17..197 904 94.1 Plus
Jupiter-PH 202 CG31363-PH 11..202 17..197 903 92.2 Plus