Clone Sequence Records
BO15645.3prime Sequence
776 bp (776 high quality bases) assembled on 2006-06-02
> BO15645.3prime
ATGGTCTAGAAAGCTTGCTCTGCCGTAGAAACTGAAGATGCTCCTGTCAG
CCAGCTTCTTTGGCGTATACTGCCACGCATCGGACCTAGACCCCACCTCC
AGTGCTTCCTGATCCTGCCCCTGATCCTGCAGTGCGTCGCGAACGAAGAA
TACTCCTCTGGCGCCAAAGCGCAGGCAGCTGAAGCGGTACTCGAAGAACT
GGCTGGCCAGAACTTTAAAGACCACCGACAGACATATCTGCATGTTGCCC
TCGCCGAACGCACGGATGTCGTAGAGTCTGAGGCAGCTGGAGAGCGGCAG
CGGCACGCAGTATTCGGGCGGATTTCGAGTCGAGAACCCGAAGGTTGCCA
CCTTGCGCTGGTTTATCTCGACGCTGAGGCGCAGACCTAGATCCGCCCGG
GTGTAGTCGAGGGCGGCGCACAACCGCTGGTTGGCTGATTCGCCGAGTCC
CAGAGCCAGGCCAAGGCAGCACCGGCAAGAGAACTCGACGCAGGAGCAGG
GCTGCCAGAGCTGGGGTAGCTCTACGATGTTACCGTTCACGGGCTGCCGT
CTGCCCCGCGAAACAGCCGAGTACCGCAGCGGCTCCAGCTGTTGGCCACT
AAAGGGGTTGTAGATAACCAGTCGTGGCACTGCACCCGGAAAATCAGCGG
GACTCGGATCCCGCCCCAGCGCGTCTAGAGCGTAGAACTCCGTCCGACAG
GGCACGACGACCGTCGTCAGCAGGCAGATCAGTCCGGGGATATTTCTTAG
TCGCCGGCACATGTCGACTGATAACT
BO15645.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-PA | 747 | CG31516-RA | 1..744 | 762..19 | 3720 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:30:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-RA | 1668 | CG31516-RA | 434..1178 | 763..19 | 3725 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4218953..4219697 | 19..763 | 3725 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:30:40 has no hits.
BO15645.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:26 Download gff for
BO15645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-PA | 1..747 | 15..762 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:56:59 Download gff for
BO15645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-PA | 1..747 | 15..762 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:48:32 Download gff for
BO15645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 425..1185 | 11..773 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:02:03 Download gff for
BO15645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 425..1185 | 11..773 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:02:03 Download gff for
BO15645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4218946..4219706 | 11..773 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:48:32 Download gff for
BO15645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 44668..45428 | 11..773 | 98 | | Plus |
BO15645.5prime Sequence
776 bp (776 high quality bases) assembled on 2006-05-30
> BO15645.5prime
GAAGTTATCAGTCGACATGTGCCGGCGACTAAGAAATATCCCCGGACTGA
TCTGCCTGCTGACGACGGTCGTCGTGCCCTGTCGGACGGAGTTCTACGCT
CTAGACGCGCTGGGGCGGGATCCGAGTCCCGCTGATTTTCCGGGTGCAGT
GCCACGACTGGTTATCTACAACCCCTTTAGTGGCCAACAGCTGGAGCCGC
TGCGGTACTCGGCTGTTTCGCGGGGCAGACGGCAGCCCGTGAACGGTAAC
ATCGTAGAGCTACCCCAGCTCTGGCAGCCCTGCTCCTGCGTCGAGTTCTC
TTGCCGGTGCTGCCTTGGCCTGGCTCTGGGACTCGGCGAATCAGCCAACC
AGCGGTTGTGCGCCGCCCTCGACTACACCCGGGCGGATCTAGGTCTGCGC
CTCAGCGTCGAGATAAACCAGCGCAAGGTGGCAACCTTCGGGTTCTCGAC
TCGAAATCCGCCCGAATACTGCGTGCCGCTGCCGCTCTCCAGCTGCCTCA
GACTCTACGACATCCGTGCGTTCGGCGAGGGCAACATGCAGATATGTCTG
TCGGTGGTCTTTAAAGTTCTGGCCAGCCAGTTCTTCGAGTACCGCTTCAG
CTGCCTGCGCTTTGGCGCCAGAGGAGTATTCTTCGTTCGCGACGCACTGC
AGGATCAGGGGCAGGATCAGGAAGCACTGGAGGTGGGGTCTAGGTCCGAT
GCGTGGCAGTATACGCCAAAGAAGCTGGCTGACAGGAGCATCTTCAGTTT
CTACGGCAGAGCAAGCTTTCTAGACC
BO15645.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-PA | 747 | CG31516-RA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-RA | 1668 | CG31516-RA | 434..1178 | 16..760 | 3725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4218953..4219697 | 760..16 | 3725 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:00:33 has no hits.
BO15645.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:27 Download gff for
BO15645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-PA | 1..747 | 17..764 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:00 Download gff for
BO15645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-PA | 1..747 | 17..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:43:42 Download gff for
BO15645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 425..1185 | 6..768 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:05:57 Download gff for
BO15645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 425..1185 | 6..768 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:05:57 Download gff for
BO15645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4218946..4219706 | 6..768 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:43:42 Download gff for
BO15645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 44668..45428 | 6..768 | 98 | | Minus |
BO15645.complete Sequence
778 bp (778 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633530
> BO15645.complete
GAAGTTATCAGTCGACATGTGCCGGCGACTAAGAAATATCCCCGGACTGA
TCTGCCTGCTGACGACGGTCGTCGTGCCCTGTCGGACGGAGTTCTACGCT
CTAGACGCGCTGGGGCGGGATCCGAGTCCCGCTGATTTTCCGGGTGCAGT
GCCACGACTGGTTATCTACAACCCCTTTAGTGGCCAACAGCTGGAGCCGC
TGCGGTACTCGGCTGTTTCGCGGGGCAGACGGCAGCCCGTGAACGGTAAC
ATCGTAGAGCTACCCCAGCTCTGGCAGCCCTGCTCCTGCGTCGAGTTCTC
TTGCCGGTGCTGCCTTGGCCTGGCTCTGGGACTCGGCGAATCAGCCAACC
AGCGGTTGTGCGCCGCCCTCGACTACACCCGGGCGGATCTAGGTCTGCGC
CTCAGCGTCGAGATAAACCAGCGCAAGGTGGCAACCTTCGGGTTCTCGAC
TCGAAATCCGCCCGAATACTGCGTGCCGCTGCCGCTCTCCAGCTGCCTCA
GACTCTACGACATCCGTGCGTTCGGCGAGGGCAACATGCAGATATGTCTG
TCGGTGGTCTTTAAAGTTCTGGCCAGCCAGTTCTTCGAGTACCGCTTCAG
CTGCCTGCGCTTTGGCGCCAGAGGAGTATTCTTCGTTCGCGACGCACTGC
AGGATCAGGGGCAGGATCAGGAAGCACTGGAGGTGGGGTCTAGGTCCGAT
GCGTGGCAGTATACGCCAAAGAAGCTGGCTGACAGGAGCATCTTCAGTTT
CTACGGCAGAGCAAGCTTTCTAGACCAT
BO15645.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:59:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-RA | 747 | CG31516-PA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-RA | 1668 | CG31516-RA | 434..1178 | 16..760 | 3725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4218953..4219697 | 760..16 | 3725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:59:41 has no hits.
BO15645.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:09 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 1..747 | 17..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:09:09 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 425..1185 | 6..768 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:46 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 435..1178 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:09 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 425..1185 | 6..768 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:13 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 435..1178 | 17..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:13 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4218951..4219696 | 17..762 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:46 Download gff for
BO15645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 44673..45418 | 17..762 | 99 | | Minus |
BO15645.pep Sequence
Translation from 16 to 778
> BO15645.pep
MCRRLRNIPGLICLLTTVVVPCRTEFYALDALGRDPSPADFPGAVPRLVI
YNPFSGQQLEPLRYSAVSRGRRQPVNGNIVELPQLWQPCSCVEFSCRCCL
GLALGLGESANQRLCAALDYTRADLGLRLSVEINQRKVATFGFSTRNPPE
YCVPLPLSSCLRLYDIRAFGEGNMQICLSVVFKVLASQFFEYRFSCLRFG
ARGVFFVRDALQDQGQDQEALEVGSRSDAWQYTPKKLADRSIFSFYGRAS
FLDH
BO15645.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:50:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-PA | 248 | CG31516-PA | 1..248 | 1..248 | 1315 | 100 | Plus |
| CG8568-PA | 759 | CG8568-PA | 46..227 | 66..232 | 198 | 27 | Plus |
| CG34038-PC | 237 | CG34038-PC | 80..198 | 88..207 | 148 | 29 | Plus |
| CG34038-PB | 271 | CG34038-PB | 114..232 | 88..207 | 148 | 29 | Plus |
