BO15651.complete Sequence
1171 bp (1171 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633533
> BO15651.complete
GAAGTTATCAGTCGACATGCCAGCCGTGAAAATAATAATGAGTACCGAAA
CGTCGGCGAGCGAGACAACACCGCTGCGGCGGTCGGAAAACGAAACACCT
GACCATAAAGAACTGGCCCAAAGTAACAGCAACAGTCGACAAACAACAGT
TAATAGCAACAACAATAACTACAGTAACTCGGTGCAAGTGCGTCTGCAGG
AACAGGACAGAGATAGCGACAGCGAGCAACAACAACATACTGCCACCATC
ACCATGGATACCAACAAAAGAATCCTCTGCCGCGTGGGCTTGGATGTTTT
AATCTTGCTCTGCGCTGGATTTCCCATACTGCTGTTTTTCCTGCTGGGCG
AGCCGTACAAGCGGGGCTTCTTCTGCGATGACGAGTCACTGAAGCACCCG
TTCCACGATTCTACGGTCCGGAATTGGATGCTATACTTCATCGGAGCTGT
GATACCAGTCGGCGTGATATTCATCGTGGAGGTCATCATTTCACAGAACA
AGGCCAAGCAGGATAATGGCAATGCAACCAGTCGAAGGTACGTCTTTATG
AACTACGAACTGCCCGACTGGATGATCGAGTGCTACAAGAAGATCGGCAT
CTATGCCTTCGGCGCTGTGCTCAGCCAGCTGACCACGGATATAGCCAAGT
ACTCCATCGGCCGACTGCGTCCCCATTTCATCGCGGTGTGCCAGCCTCAA
ATGGCCGACGGCAGCACCTGCGACGATGCGATCAATGCGGGAAAATACAT
CCAGGAGTTCACATGCAAGGGAGTTGGATCGTCGGCGCGCATGCTCAAAG
AGATGCGCCTCTCCTTCCCCAGTGGCCACTCCAGCTTCACCTTCTTCGCC
ATGGTCTATCTGGCGCTCTACCTGCAGGCTCGCATGACCTGGCGGGGCTC
CAAGCTGCTGCGTCACCTTCTCCAGTTCCTGTTCATCATGGTGGCCTGGT
ACACAGCCCTAAGTCGCGTATCGGACTACAAGCACCACTGGTCCGATGTG
CTGGCAGGATCGCTTATTGGCTCCATAAGCGCACTGGTCGTGGCCAACTA
TGTCTCCGACTTGTTTCAAAAGCCCAACACGAAGCCCTATTTGGCGCGTA
CAGTGCAAGACATGAATGCATCGCCGGCCCAGGCCATAACGATTACTACA
AACGCAAGCTTTCTAGACCAT
BO15651.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wun-RB | 1140 | CG8804-PB | 1..1137 | 17..1153 | 5685 | 100 | Plus |
| wun-RC | 1095 | CG8804-PC | 1..1026 | 17..1042 | 5130 | 100 | Plus |
| wun-RA | 903 | CG8804-PA | 1..900 | 254..1153 | 4500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wun-RB | 2026 | CG8804-RB | 383..1519 | 17..1153 | 5685 | 100 | Plus |
| wun-RA | 1626 | CG8804-RA | 1..1119 | 35..1153 | 5595 | 100 | Plus |
| wun-RC | 1563 | CG8804-RC | 383..1408 | 17..1042 | 5130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:46:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9409213..9409510 | 314..17 | 1490 | 100 | Minus |
| 2R | 25286936 | 2R | 9403705..9403926 | 687..466 | 1110 | 100 | Minus |
| 2R | 25286936 | 2R | 9402656..9402836 | 865..685 | 905 | 100 | Minus |
| 2R | 25286936 | 2R | 9402408..9402586 | 1043..865 | 895 | 100 | Minus |
| 2R | 25286936 | 2R | 9404307..9404459 | 466..314 | 765 | 100 | Minus |
| 2R | 25286936 | 2R | 9401038..9401149 | 1153..1042 | 560 | 100 | Minus |
| 3L | 28110227 | 3L | 22472833..22473048 | 806..1021 | 210 | 73.1 | Plus |
| 2R | 25286936 | 2R | 9417435..9417540 | 906..1011 | 200 | 79.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:46:47 has no hits.
BO15651.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:53 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wun-RB | 1..1140 | 17..1157 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:46 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wun-RB | 374..1519 | 9..1157 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:35:05 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wun-RB | 383..1519 | 17..1155 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:53 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wun-RB | 374..1519 | 9..1157 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:24 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wun-RB | 383..1519 | 17..1155 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:24 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9403707..9403925 | 467..685 | 100 | <- | Minus |
| 2R | 9404307..9404458 | 315..466 | 100 | <- | Minus |
| 2R | 9409213..9409510 | 17..314 | 100 | | Minus |
| 2R | 9402409..9402585 | 866..1042 | 100 | <- | Minus |
| 2R | 9402656..9402835 | 686..865 | 100 | <- | Minus |
| 2R | 9401036..9401148 | 1043..1155 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:35:05 Download gff for
BO15651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5288541..5288653 | 1043..1155 | 98 | <- | Minus |
| arm_2R | 5289914..5290090 | 866..1042 | 100 | <- | Minus |
| arm_2R | 5290161..5290340 | 686..865 | 100 | <- | Minus |
| arm_2R | 5291212..5291430 | 467..685 | 100 | <- | Minus |
| arm_2R | 5291812..5291963 | 315..466 | 100 | <- | Minus |
| arm_2R | 5296718..5297015 | 17..314 | 100 | | Minus |
BO15651.pep Sequence
Translation from 16 to 1171
> BO15651.pep
MPAVKIIMSTETSASETTPLRRSENETPDHKELAQSNSNSRQTTVNSNNN
NYSNSVQVRLQEQDRDSDSEQQQHTATITMDTNKRILCRVGLDVLILLCA
GFPILLFFLLGEPYKRGFFCDDESLKHPFHDSTVRNWMLYFIGAVIPVGV
IFIVEVIISQNKAKQDNGNATSRRYVFMNYELPDWMIECYKKIGIYAFGA
VLSQLTTDIAKYSIGRLRPHFIAVCQPQMADGSTCDDAINAGKYIQEFTC
KGVGSSARMLKEMRLSFPSGHSSFTFFAMVYLALYLQARMTWRGSKLLRH
LLQFLFIMVAWYTALSRVSDYKHHWSDVLAGSLIGSISALVVANYVSDLF
QKPNTKPYLARTVQDMNASPAQAITITTNASFLDH
BO15651.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wun-PB | 379 | CG8804-PB | 1..379 | 1..379 | 1969 | 100 | Plus |
| wun-PC | 364 | CG8804-PC | 1..343 | 1..343 | 1781 | 99.7 | Plus |
| wun-PA | 300 | CG8804-PA | 1..300 | 80..379 | 1573 | 100 | Plus |
| wun2-PA | 350 | CG8805-PA | 8..347 | 13..344 | 799 | 45.6 | Plus |
| wun2-PB | 246 | CG8805-PB | 1..243 | 104..344 | 716 | 54.3 | Plus |
