BO15655.complete Sequence
1885 bp assembled on 2008-11-10
GenBank Submission: KX799617
> BO15655.complete
GAAGTTATCAGTCGACATGCACTGGTACGACGAATACAAGCACATCGGTT
ACGACTGGGATGCCAAGAAGATTATTAAACCACCACAAGGAGATCAAATT
GATGAGTTCCTGCGTAAGATCGAGGACCCAGACTTTTGGCGTACCGTCAA
GGATCCACTTACCGGTCAGGATGTGCGCCTAACAGACGAGGACATTGCTC
TGATCAAGCGCATCGTTTCGGGTCGCATACCCAACAAGGATCACGAAGAG
TATGAGCCCTGGATCGAATGGTTCACATCGGAGGTGGAAAAGATGCCCAT
CAAGAACGTACCCGACCACAAACGCTCTTTCCTGCCCTCAGTTTCCGAGA
AAAAGCGCGTCTCTCGCATGGTGCACGCCCTCAAAATGGGCTGGATGAAG
ACCACTGAGGAAGTGGAACGCGAGAAGCAGGCCAAGCGCGGTCCCAAGTT
CTACATGCTGTGGGAAACGGACACCAGTCGGGAACACATGCGCCGCATCC
ACGATCCAGTCTCTGCGCCCAAACGCGACCTTCCCGGTCATGCCGAGTCC
TACAATCCACCGCCAGAGTATCTTTTCGATGCCAAGGAGACCAAGGAGTG
GCTTAAACTAAAGGACGAGCCACACAAGCGCAAGCTGCACTTCATGCCAC
AGAAGTTCAAGTCGCTGAGGGAGGTGCCCGCATACTCGAGATACCTTCGG
GAGCGTTTCCTTCGTTGCCTGGATCTTTACCTGTGTCCCCGTGCAAAGCG
TGTCAAGCTGAACATCGATGCCGAGTACCTTATCCCCAAGTTGCCCTCGC
CGCGTGACCTGCAACCCTTTCCCACGGTGGAGAGTATGGTTTACCGTGGC
CACACCGATCTGGTGCGGTCTGTTAGTGTGGAGCCCAAGGGAGAGTACCT
CGTCTCCGGTTCGGATGATAAAACCGTCAAGATTTGGGAAATTGCAACAG
GTCGTTGCATTCGCACAATCGAGACCGACGAAGTGGTACGCTGTGTGGCT
TGGTGTCCAAATCCCAAGCTGTCTATTATTGCGGTGGCCACTGGCAATCG
CTTGCTGCTCGTCAATCCTAAAGTGGGCGATAAGGTGCTGGTGAAGAAGA
CCGACGATCTCTTGGCTGAGGCGCCCAGTCAGGATGTCATTGAAAGTGAA
CGCATCAAGACGGCGGTGCAATGGTCAAATGCGGAAGCTGATGAGCAGGA
GAAGGGCGTCCGCGTAGTGATTACCCACTTCAAACCCATCCGACAGGTGA
CCTGGCACGGTCGTGGTGACTACTTGGCCACAGTGATGCCCGAAGGTGCT
AACCGCTCGGCTTTAATTCATCAGTTGTCCAAGCGGCGCTCACAGATTCC
ATTCTCCAAGAGCAAGGGTCTCATCCAATTCGTGCTCTTCCATCCGGTGA
AGCCCTGCTTCTTTGTGGCGACGCAACACAACATTCGCATTTATGATCTG
GTCAAACAAGAGCTTGTCAAGAAGCTGCTGACCAACTCCAAATGGATATC
GGGCATGTCTATTCATCCCAAGGGCGACAATCTGCTGGTGTCCACCTATG
ACAAAAAGATGCTCTGGTTCGATTTGGATCTGTCCACAAAGCCCTACCAG
ACCATGCGACTCCATCGCAATGCAGTTCGCAGTGTTGCTTTCCATCTTCG
ATATCCGCTCTTTGCTTCCGGCAGCGATGACCAGGCTGTGATCGTCTCCC
ATGGCATGGTCTATAATGACCTGCTGCAAAACCCTTTGATTGTGCCTCTC
AAGAAGCTGCAAACACACGAGAAACGCGATGAGTTTGGTGTGCTGGATGT
TAACTGGCATCCGGTGCAGCCATGGGTCTTCTCCACGGGCGCGGACAGTA
CCATCCGACTATACACGGCAAGCTTTCTAGACCAT
BO15655.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:43:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5033-RA | 2355 | CG5033-PA | 501..2352 | 16..1867 | 9260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:43:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5033-RA | 2514 | CG5033-RA | 569..2420 | 16..1867 | 9260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17790317..17791233 | 16..932 | 4585 | 100 | Plus |
| 2R | 25286936 | 2R | 17791297..17791784 | 933..1420 | 2440 | 100 | Plus |
| 2R | 25286936 | 2R | 17791844..17792140 | 1420..1716 | 1485 | 100 | Plus |
| 2R | 25286936 | 2R | 17792204..17792354 | 1717..1867 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:43:40 has no hits.
BO15655.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:18:11 Download gff for
BO15655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RB | 614..2477 | 9..1876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:36:28 Download gff for
BO15655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 570..2420 | 17..1869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-11 13:12:33 Download gff for
BO15655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RB | 621..2471 | 17..1869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:59 Download gff for
BO15655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 570..2420 | 17..1869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:59 Download gff for
BO15655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17792204..17792354 | 1717..1869 | 98 | | Plus |
| 2R | 17790318..17791233 | 17..932 | 100 | -> | Plus |
| 2R | 17791297..17791784 | 933..1420 | 100 | -> | Plus |
| 2R | 17791845..17792140 | 1421..1716 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:36:28 Download gff for
BO15655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13677823..13678738 | 17..932 | 100 | -> | Plus |
| arm_2R | 13678802..13679289 | 933..1420 | 100 | -> | Plus |
| arm_2R | 13679350..13679645 | 1421..1716 | 100 | -> | Plus |
| arm_2R | 13679709..13679859 | 1717..1869 | 98 | | Plus |
BO15655.pep Sequence
Translation from 16 to 1885
> BO15655.pep
MHWYDEYKHIGYDWDAKKIIKPPQGDQIDEFLRKIEDPDFWRTVKDPLTG
QDVRLTDEDIALIKRIVSGRIPNKDHEEYEPWIEWFTSEVEKMPIKNVPD
HKRSFLPSVSEKKRVSRMVHALKMGWMKTTEEVEREKQAKRGPKFYMLWE
TDTSREHMRRIHDPVSAPKRDLPGHAESYNPPPEYLFDAKETKEWLKLKD
EPHKRKLHFMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNI
DAEYLIPKLPSPRDLQPFPTVESMVYRGHTDLVRSVSVEPKGEYLVSGSD
DKTVKIWEIATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVN
PKVGDKVLVKKTDDLLAEAPSQDVIESERIKTAVQWSNAEADEQEKGVRV
VITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRSQIPFSKSK
GLIQFVLFHPVKPCFFVATQHNIRIYDLVKQELVKKLLTNSKWISGMSIH
PKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFA
SGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVNWHPV
QPWVFSTGADSTIRLYTASFLDH
BO15655.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5033-PA | 784 | CG5033-PA | 168..784 | 1..617 | 3294 | 100 | Plus |
| Poc1-PA | 391 | CG10191-PA | 14..296 | 276..560 | 182 | 24.1 | Plus |
| Poc1-PB | 403 | CG10191-PB | 14..296 | 276..560 | 182 | 24.1 | Plus |
