Clone BO15658 Report

Search the DGRC for BO15658

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:58
Vector:pDNR-Dual
Associated Gene/Transcriptstai-RC
Protein status:BO15658.pep: validated full length
Sequenced Size:805

Clone Sequence Records

BO15658.3prime Sequence

798 bp (797 high quality bases) assembled on 2006-06-02

> BO15658.3prime
ATGGTCTAGAAAGCTTGCGCCTGAGGAGGCAATGGCGCTCTGCTGACCAT
CCAAATCCTGGGCCTGGGCCTTGTTCTGGCGCACGAGCTCAGCGCGACGT
TCGAGTTTTTGAACTTTTTCAATTTTTTTTTGCAATTCCTTTTCGCGTTT
CTGCTCGGCGGCGAACAATTTGTTCTCATAAATGCGCGCTTTCTCCTCGA
TCTTTTGACATTCCAATTGATCGTTCTGCGATTTGATTTCGGCAATTTTG
ATTGTGTTATGCTCCTTTAGGCGATCCAACATTTTCTTGATATTCTCATC
GCGAAGAGACTGAGCAATCTTCAACTTTTCCTCGATTGCCTTCTGCTCGT
TGGCCTTCTGCTGCTCAAGAGTCTCACGCGTCTTTTCGATATCCTGGGCA
TGGATCTTTAGCTTCTCCTTCATGTCACTGATGATGGCCTCTCGCTTCTC
CACATGCAGCTCCATTTTCGACTCCAGCTGCTCCTTGGTCTGAGTAATAA
ACTCATTGGTGATCTCATCCTTTTTGCGAGTCGCCTCCTCGACTTTAGCC
AGCTTAGTGGAGATGTCAGCCATCTTCTTGGCTTCTAGAGAAATGCGACG
TTCCTCGGCCGCCTTAAGTTTCTGCTCAATCTCCTCGACGCTAACGTTCT
TGCCAGGGGTGACCGGTCGTTTTGGAACGGCCACATTGGGTGCCGGTTCG
GCCAGGATGACCTCATAGCTCAATCCCCCGCGGGACTTCTCCTGGCAGCG
AATCTCTGTGGCTTCAGTATCAACAGTGTTGTTCACCATGTCGACTGA

BO15658.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG31641-PC 774 stai-RC 1..771 789..19 3855 100 Minus
CG31641-PB 909 stai-RB 164..906 761..19 3715 100 Minus
CG31641-PA 753 stai-RA 164..666 761..259 2515 100 Minus
CG31641-PA 753 stai-RA 667..750 102..19 420 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1021 789..19 3855 100 Minus
stai-RD 2872 CG31641-RD 537..1280 762..19 3720 100 Minus
stai-RE 2395 CG31641-RE 815..1557 761..19 3715 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 591..406 930 100 Minus
2L 23513712 2L 6121772..6121943 763..592 860 100 Minus
2L 23513712 2L 6122698..6122859 258..97 795 99.4 Minus
2L 23513712 2L 6122260..6122410 409..259 755 100 Minus
2L 23513712 2L 6122978..6123061 102..19 420 100 Minus
Blast to na_te.dros performed 2015-02-10 22:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 438..354 110 58.8 Minus

BO15658.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:30 Download gff for BO15658.3prime
Subject Subject Range Query Range Percent Splice Strand
stai-PC 1..774 15..789 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:05 Download gff for BO15658.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31641-PC 1..774 15..789 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:43:39 Download gff for BO15658.3prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1025 14..789 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:47 Download gff for BO15658.3prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1025 14..789 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:47 Download gff for BO15658.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6122264..6122410 259..405 100 -> Minus
2L 6122698..6122853 103..258 100 -> Minus
2L 6122978..6123065 14..102 97   Minus
2L 6101771..6101798 762..789 100 -> Minus
2L 6121774..6121943 592..761 100 -> Minus
2L 6122005..6122190 406..591 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:39 Download gff for BO15658.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6101771..6101798 762..789 100 -> Minus
arm_2L 6121774..6121943 592..761 100 -> Minus
arm_2L 6122005..6122190 406..591 100 -> Minus
arm_2L 6122264..6122410 259..405 100 -> Minus
arm_2L 6122698..6122853 103..258 100 -> Minus
arm_2L 6122978..6123065 14..102 97   Minus

BO15658.5prime Sequence

803 bp (780 high quality bases) assembled on 2006-05-30

> BO15658.5prime
GAAGTTATCAGTCGACATGGTGAACAACACTGTTGATACTGAAGCCACAG
AGATTCGCTGCCAGGAGAAGTCCCGCGGGGGATTGAGCTATGAGGTCATC
CTGGCCGAACCGGCACCCAATGTGGCCGTTCCAAAACGACCGGTCACCCC
TGGCAAGAACGTTAGCGTCGAGGAGATTGAGCAGAAACTTAAGGCGGCCG
AGGAACGTCGCATTTCTCTAGAAGCCAAGAAGATGGCTGACATCTCCACT
AAGCTGGCTAAAGTCGAGGAGGCGACTCGCAAAAAGGATGAGATCACCAA
TGAGTTTATTACTCAGACCAAGGAGCAGCTGGAGTCGAAAATGGAGCTGC
ATGTGGAGAAGCGAGAGGCCATCATCAGTGACATGAAGGAGAAGCTAAAG
ATCCATGCCCAGGATATCGAAAAGACGCGTGAGACTCTTGAGCAGCAGAA
GGCCAACGAGCAGAAGGCAATCGAGGAAAAGTTGAAGATTGCTCAGTCTC
TTCGCGATGAGAATATCAAGAAAATGTTGGATCGCCTAAAGGAGCATAAC
ACAATCAAAATTGCCGAAATCAAATCGCAGAACGATCAATTGGAATGTCA
AAAGATCGAGGAGAAAGCGCGCATTTATGAGAACAAATTGTTCGCCGCCG
AGCAGAAACGCGAAAAGGAATTGCAAAAAAAAATTGAAAAAGTTCAAAAA
CTCGAACGTCGCGCTGAGCTCGTGCGCCAGAACAAGGCCCAGGCCCAGGA
TTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCGCAAGCTTTCTAG
ACC

BO15658.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG31641-PC 774 stai-RC 1..771 17..787 3855 100 Plus
CG31641-PB 909 stai-RB 164..906 45..787 3715 100 Plus
CG31641-PA 753 stai-RA 164..666 45..547 2515 100 Plus
CG31641-PA 753 stai-RA 667..750 704..787 420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1021 17..787 3855 100 Plus
stai-RD 2872 CG31641-RD 537..1280 44..787 3720 100 Plus
stai-RE 2395 CG31641-RE 815..1557 45..787 3715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:06:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 215..400 930 100 Plus
2L 23513712 2L 6121772..6121943 43..214 860 100 Plus
2L 23513712 2L 6122698..6122859 548..709 795 99.4 Plus
2L 23513712 2L 6122260..6122410 397..547 755 100 Plus
2L 23513712 2L 6122978..6123061 704..787 420 100 Plus
Blast to na_te.dros performed 2015-02-12 00:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 368..452 110 58.8 Plus

BO15658.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:31 Download gff for BO15658.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-PC 1..774 17..791 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:06 Download gff for BO15658.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31641-PC 1..774 17..791 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:57:09 Download gff for BO15658.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1025 17..792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:56:00 Download gff for BO15658.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1025 17..792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:56:00 Download gff for BO15658.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6101771..6101798 17..44 100 -> Plus
2L 6121774..6121943 45..214 100 -> Plus
2L 6122005..6122190 215..400 100 -> Plus
2L 6122264..6122410 401..547 100 -> Plus
2L 6122698..6122853 548..703 100 -> Plus
2L 6122978..6123065 704..792 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:57:09 Download gff for BO15658.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6101771..6101798 17..44 100 -> Plus
arm_2L 6121774..6121943 45..214 100 -> Plus
arm_2L 6122005..6122190 215..400 100 -> Plus
arm_2L 6122264..6122410 401..547 100 -> Plus
arm_2L 6122698..6122853 548..703 100 -> Plus
arm_2L 6122978..6123065 704..792 97   Plus

BO15658.complete Sequence

805 bp (805 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633536

> BO15658.complete
GAAGTTATCAGTCGACATGGTGAACAACACTGTTGATACTGAAGCCACAG
AGATTCGCTGCCAGGAGAAGTCCCGCGGGGGATTGAGCTATGAGGTCATC
CTGGCCGAACCGGCACCCAATGTGGCCGTTCCAAAACGACCGGTCACCCC
TGGCAAGAACGTTAGCGTCGAGGAGATTGAGCAGAAACTTAAGGCGGCCG
AGGAACGTCGCATTTCTCTAGAAGCCAAGAAGATGGCTGACATCTCCACT
AAGCTGGCTAAAGTCGAGGAGGCGACTCGCAAAAAGGATGAGATCACCAA
TGAGTTTATTACTCAGACCAAGGAGCAGCTGGAGTCGAAAATGGAGCTGC
ATGTGGAGAAGCGAGAGGCCATCATCAGTGACATGAAGGAGAAGCTAAAG
ATCCATGCCCAGGATATCGAAAAGACGCGTGAGACTCTTGAGCAGCAGAA
GGCCAACGAGCAGAAGGCAATCGAGGAAAAGTTGAAGATTGCTCAGTCTC
TTCGCGATGAGAATATCAAGAAAATGTTGGATCGCCTAAAGGAGCATAAC
ACAATCAAAATTGCCGAAATCAAATCGCAGAACGATCAATTGGAATGTCA
AAAGATCGAGGAGAAAGCGCGCATTTATGAGAACAAATTGTTCGCCGCCG
AGCAGAAACGCGAAAAGGAATTGCAAAAAAAAATTGAAAAAGTTCAAAAA
CTCGAACGTCGCGCTGAGCTCGTGCGCCAGAACAAGGCCCAGGCCCAGGA
TTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCGCAAGCTTTCTAG
ACCAT

BO15658.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 774 CG31641-PC 1..771 17..787 3855 100 Plus
stai-RD 1146 CG31641-PD 400..1143 44..787 3720 100 Plus
stai-RE 909 CG31641-PE 164..906 45..787 3715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1021 17..787 3855 100 Plus
stai-RD 2872 CG31641-RD 537..1280 44..787 3720 100 Plus
stai-RE 2395 CG31641-RE 815..1557 45..787 3715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 215..400 930 100 Plus
2L 23513712 2L 6121772..6121943 43..214 860 100 Plus
2L 23513712 2L 6122698..6122859 548..709 795 99.4 Plus
2L 23513712 2L 6122260..6122410 397..547 755 100 Plus
2L 23513712 2L 6122978..6123061 704..787 420 100 Plus
Blast to na_te.dros performed 2014-11-27 13:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 368..452 110 58.8 Plus

BO15658.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:55 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 1..774 17..791 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:52:57 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 250..1020 17..789 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:30:37 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1021 17..789 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:56 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 250..1024 17..792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:12 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1021 17..789 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:12 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6121774..6121943 45..214 100 -> Plus
2L 6122005..6122190 215..400 100 -> Plus
2L 6122264..6122410 401..547 100 -> Plus
2L 6122698..6122853 548..703 100 -> Plus
2L 6122978..6123061 704..789 97   Plus
2L 6101771..6101798 17..44 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:30:37 Download gff for BO15658.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6122264..6122410 401..547 100 -> Plus
arm_2L 6122698..6122853 548..703 100 -> Plus
arm_2L 6122978..6123061 704..789 97   Plus
arm_2L 6101771..6101798 17..44 100 -> Plus
arm_2L 6121774..6121943 45..214 100 -> Plus
arm_2L 6122005..6122190 215..400 100 -> Plus

BO15658.pep Sequence

Translation from 16 to 805

> BO15658.pep
MVNNTVDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVS
VEEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQ
TKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKANEQK
AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEK
ARIYENKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKAQAQDLDGQQ
SAIASSGASFLDH

BO15658.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
stai-PC 257 CG31641-PC 1..257 1..257 1256 100 Plus
stai-PD 381 CG31641-PD 134..381 10..257 1210 100 Plus
stai-PE 302 CG31641-PE 56..302 11..257 1206 100 Plus
stai-PB 302 CG31641-PB 56..302 11..257 1206 100 Plus
stai-PA 250 CG31641-PA 56..250 11..257 850 76.5 Plus