BO15659.complete Sequence
1456 bp (1456 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ638741
> BO15659.complete
GAAGTTATCAGTCGACATGGGTGTCACTGTTAAAATTCTGGTCTTGATAC
TGGCCATTGCCGGTGGGCTGGTCTATAGGAATGTGACCCAACTATGGGCG
GACTTGCCCGCACCAAAGTTGGATCCCCAGGAGTGGTGGGGCGATGAGGC
GCAGCCCAAGGATTACGAGGCCTATTTGAAGAACAATTCGGAGGTGATAG
GCAATAGGCTTAGTTATCCGGATAAGACCATTGCTGATTTGAAAGAGCGT
CTCAATCGCACCCTGCGCCTTACGCCTCCGCTCGAGGGCGTGGCTTTTGA
GTACGGATTCAATACGAATTACCTTAAGGAGGTCGTGGAGTACTGGCGCG
ATGACTACCTGCCGCGTTGGCGCGAACGCGAGGTGTTCCTTTGGCAGTTC
AATCACTTCACCACCGATATTCAGGGGCTACGCACACACTTCCTCCACCT
GATGGTTTATGATGACAACAAAGTGGGTAAGAAACACTATCCGGTGTTGC
TGCTCCACGGATGGCCGGGATCGGTGCGGGAGTTTTACGATTTCATACAT
TTGCTGCATCAGACCAATCTGGACAATAATAACAAGTACATCTTTAACGT
CGTGGTTCCGAGTTTACCAGGTTATGGCTGGTCACAGGGCACCTCCAGAA
AAGGACTGGGTCCCGCTCAAGTGGCGGTGATGATGAGGAATCTTATGCTG
CGTTTGGGATACAACAAATTCTTTATCCAGGGTGGAGACTGGGGCAGCAT
TATTGGCAGCAACATTGCCACCTTGTATCCGGAAAACGTGCTGGGCTACC
ACTCGAACATGTGCAACAATTTGAGTCCGAAGTCGCTGGCTAAGGGTTTA
GTGGCCGAATTTTGGCCCAGTTTGTTTGTGCCCTCTGGCTTTGAAGATTT
CTTCTTTCCCAAGTCTAACGAGATGAGATACCTAATGGAGGAGAGTGGCT
ACTTCCACATCCAGGCCACCAAACCGGACACCATCGGAGCCGCCCTCACC
GATAACCCAGTGGGTCTGGCCGCCTACATTCTGGAGAAGTTCTCCACGTG
GACAAATCCCAGCTACCGATCTCTGCCAGATGGAGGACTCACTAAGCGCT
ACAAAATGGATGCCCTGCTGGACAACCTGATGATCTACTACCTGACCAAT
TCGATTACCACCTCCCAGCGTCTCTATGCCGAGCAGTATGCCCAGGCACA
GCGGGACCTGCACCTGGATCGGGTTCCCACCCGAGTGCCAACTGGATGTG
CCCGTTTCAAGAGCGACATTATGCAGTTCCTGGATGTCCAGTTGAAGGAT
AAGTACACGAACCTAGTGCACAGCACTTACCACAAAAAGGGCGGGCACTT
TGCCGCTCTAGAGGTTCCAAAGGTTCTATACAAGGATTTTATAGACTTTG
TCGAAACGGTGGAACGTAAGTTTAAAATTAAGACTCTGGCAAGCTTTCTA
GACCAT
BO15659.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:16:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jheh1-RA | 1425 | CG15101-PA | 1..1422 | 17..1438 | 7110 | 100 | Plus |
| Jheh3-RA | 1407 | CG15106-PA | 650..783 | 681..814 | 340 | 83.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jheh1-RA | 1486 | CG15101-RA | 35..1456 | 17..1438 | 7110 | 100 | Plus |
| Jheh3-RA | 1576 | CG15106-RA | 802..935 | 681..814 | 340 | 83.6 | Plus |
| Jheh2-RD | 1926 | CG15102-RD | 1297..1546 | 933..1182 | 230 | 72.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18853464..18854267 | 1438..635 | 4020 | 100 | Minus |
| 2R | 25286936 | 2R | 18854322..18854534 | 638..426 | 1065 | 100 | Minus |
| 2R | 25286936 | 2R | 18854844..18855053 | 226..17 | 1050 | 100 | Minus |
| 2R | 25286936 | 2R | 18854587..18854789 | 427..225 | 1015 | 100 | Minus |
| 2R | 25286936 | 2R | 18861016..18861149 | 814..681 | 340 | 83.6 | Minus |
| 2R | 25286936 | 2R | 18856147..18856396 | 1182..933 | 230 | 72.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:16:23 has no hits.
BO15659.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:57 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jheh1-RA | 1..1425 | 17..1439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:52 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jheh1-RA | 57..1486 | 17..1446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:35 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jheh1-RA | 35..1456 | 17..1440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:57 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jheh1-RA | 57..1486 | 17..1446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:01 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jheh1-RA | 35..1456 | 17..1440 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:01 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18853462..18854264 | 638..1440 | 99 | <- | Minus |
| 2R | 18854323..18854533 | 427..637 | 100 | <- | Minus |
| 2R | 18854588..18854787 | 227..426 | 100 | <- | Minus |
| 2R | 18854844..18855053 | 17..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:35 Download gff for
BO15659.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14740967..14741769 | 638..1440 | 99 | <- | Minus |
| arm_2R | 14741828..14742038 | 427..637 | 100 | <- | Minus |
| arm_2R | 14742093..14742292 | 227..426 | 100 | <- | Minus |
| arm_2R | 14742349..14742558 | 17..226 | 100 | | Minus |
BO15659.pep Sequence
Translation from 16 to 1456
> BO15659.pep
MGVTVKILVLILAIAGGLVYRNVTQLWADLPAPKLDPQEWWGDEAQPKDY
EAYLKNNSEVIGNRLSYPDKTIADLKERLNRTLRLTPPLEGVAFEYGFNT
NYLKEVVEYWRDDYLPRWREREVFLWQFNHFTTDIQGLRTHFLHLMVYDD
NKVGKKHYPVLLLHGWPGSVREFYDFIHLLHQTNLDNNNKYIFNVVVPSL
PGYGWSQGTSRKGLGPAQVAVMMRNLMLRLGYNKFFIQGGDWGSIIGSNI
ATLYPENVLGYHSNMCNNLSPKSLAKGLVAEFWPSLFVPSGFEDFFFPKS
NEMRYLMEESGYFHIQATKPDTIGAALTDNPVGLAAYILEKFSTWTNPSY
RSLPDGGLTKRYKMDALLDNLMIYYLTNSITTSQRLYAEQYAQAQRDLHL
DRVPTRVPTGCARFKSDIMQFLDVQLKDKYTNLVHSTYHKKGGHFAALEV
PKVLYKDFIDFVETVERKFKIKTLASFLDH
BO15659.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jheh1-PA | 474 | CG15101-PA | 1..474 | 1..474 | 2546 | 100 | Plus |
| Jheh2-PD | 463 | CG15102-PD | 7..458 | 6..463 | 1286 | 54.7 | Plus |
| Jheh2-PA | 463 | CG15102-PA | 7..458 | 6..463 | 1286 | 54.7 | Plus |
| Jheh3-PA | 468 | CG15106-PA | 9..457 | 10..462 | 1221 | 53 | Plus |
