BO15660.complete Sequence
1063 bp (1063 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633537
> BO15660.complete
GAAGTTATCAGTCGACATGGATGACTCGGAATTCATGTTCAACGAGAAGC
AATCGATCCGGGACTCCGGGCGCACCCTCAAGCGCTACGGGAGCACCTGC
TGCAACAGCCTCCGGAACAATGAGACCCTCATCCGGCACATCGTCGAGAA
GACGGACACGCTGCAGGGCATCGCCCTCAAGTACGGCTGCACGACGGAGC
AAATAAGACGGGCCAACCGCCTCTTCGCCTCGGACAGCCTGTTCCTGCGT
CAGTTTCTCCTCGTTCCAGTGGAGAAGAACTCACCGTACTATCCCCAGGT
GCCTGGCGATTCGATAGCCGCTTTCGACGCCGTGCTGGCCACGCCACCGG
GCACTCCGGATGCCAATGGACAGCGGGAGGCGCACAACAATGCCAATAAT
CTGAGCCAGAGCAACAAGAGCTTCATGAAGAGCAACGACATCAGCAGCAG
CAGTAGCAGCAGCAGCAGTGGGAGCAGCAGCAGCTGCAACACAAGTGGCA
CCGGCCCCATTTCCGGAGGATCGCGTTCCGGCGGCAACCAACAGCAGCAG
CAGCAACAGCCCCCACAACGTCCCTACTCCATTGCCGGGGAGCTGCTGGT
GGTGCAGGCCGGCGACGAGGATCCATCGATGATGCACGGCCACGGTGGTT
GCAGCGGCAAGCAGAGCAAGAGCCTGGACTCGGTGGCCGCAATGACGCCC
GAGGAGGAGAACAGGAAATGCATGAACGACTTCCTTAACAAGATAGACAA
CACCATTTCTGAGTCGCGCAAATATGTGGAGCGCTCTAAGGACCTGGTCA
GCAGTCAGAGTGATGCGGACATCTGCATCAGTGCCACCGCCGACGTTTTC
CCGCAGCGCCGCCATCCGCTGAACAACTCCTACAAGACCAACAACAACGA
CCGTCCGTCACAGTATCAGCGCCACAGCTCGACGGGCAGCGGGAACTCCT
CGGATACGGCGCACCTGCTGAACACGACGCAGACGCGACGAGTCCAGAAT
TCGCTGAAGCGGCTGGAGAAGCAGCAGGACGACTTCTTTGAGTTGGCAAG
CTTTCTAGACCAT
BO15660.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:32:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-RG | 1101 | CG12207-PG | 66..1098 | 13..1045 | 5150 | 99.9 | Plus |
CG12207-RF | 1101 | CG12207-PF | 66..1098 | 13..1045 | 5150 | 99.9 | Plus |
CG12207-RC | 1101 | CG12207-PC | 66..1098 | 13..1045 | 5150 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:32:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-RG | 2535 | CG12207-RG | 707..1739 | 13..1045 | 5150 | 99.9 | Plus |
CG12207-RF | 2113 | CG12207-RF | 285..1317 | 13..1045 | 5150 | 99.9 | Plus |
CG12207-RE | 1927 | CG12207-RE | 99..1131 | 13..1045 | 5150 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:32:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14300419..14301018 | 193..792 | 3000 | 100 | Plus |
3R | 32079331 | 3R | 14301228..14301480 | 793..1045 | 1250 | 99.6 | Plus |
3R | 32079331 | 3R | 14298807..14298987 | 13..193 | 905 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 01:32:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 404..569 | 319 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 406..569 | 275 | 66.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 384..551 | 220 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 426..581 | 216 | 63.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 473..572 | 165 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 454..569 | 161 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 419..569 | 149 | 58.2 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 403..569 | 146 | 58.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 370..572 | 138 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 474..569 | 130 | 64.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 529..569 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 529..569 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 532..572 | 111 | 76.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 537..569 | 111 | 81.8 | Plus |
BO15660.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:58 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RC | 62..1101 | 8..1046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:54 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RA | 321..1361 | 8..1051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:27 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RD | 234..1262 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:58 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RA | 321..1361 | 8..1051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:27:32 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RE | 103..1131 | 17..1047 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:27:32 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14301228..14301480 | 793..1047 | 98 | | Plus |
3R | 14298811..14298987 | 17..193 | 100 | -> | Plus |
3R | 14300420..14301018 | 194..792 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:27 Download gff for
BO15660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10126950..10127202 | 793..1047 | 98 | | Plus |
arm_3R | 10124533..10124709 | 17..193 | 100 | -> | Plus |
arm_3R | 10126142..10126740 | 194..792 | 100 | -> | Plus |
BO15660.pep Sequence
Translation from 16 to 1063
> BO15660.pep
MDDSEFMFNEKQSIRDSGRTLKRYGSTCCNSLRNNETLIRHIVEKTDTLQ
GIALKYGCTTEQIRRANRLFASDSLFLRQFLLVPVEKNSPYYPQVPGDSI
AAFDAVLATPPGTPDANGQREAHNNANNLSQSNKSFMKSNDISSSSSSSS
SGSSSSCNTSGTGPISGGSRSGGNQQQQQQQPPQRPYSIAGELLVVQAGD
EDPSMMHGHGGCSGKQSKSLDSVAAMTPEEENRKCMNDFLNKIDNTISES
RKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDRPSQY
QRHSSTGSGNSSDTAHLLNTTQTRRVQNSLKRLEKQQDDFFELASFLDH
BO15660.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:34:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-PE | 343 | CG12207-PE | 1..343 | 1..343 | 1777 | 100 | Plus |
CG12207-PD | 343 | CG12207-PD | 1..343 | 1..343 | 1777 | 100 | Plus |
CG12207-PA | 343 | CG12207-PA | 1..343 | 1..343 | 1777 | 100 | Plus |
CG12207-PG | 366 | CG12207-PG | 24..366 | 1..343 | 1777 | 100 | Plus |
CG12207-PF | 366 | CG12207-PF | 24..366 | 1..343 | 1777 | 100 | Plus |