BO15664.complete Sequence
1348 bp (1348 high quality bases) assembled on 2006-08-25
GenBank Submission: FJ633541
> BO15664.complete
GAAGTTATCAGTCGACATGCGAGTTTTAGGAAAGTGCACTGTTTTGGTCA
GGCAAACCCGCAGCTTATCCACGCCATCTGGGCGCCGCAGAGTGGTGGTC
ACGGGAAGTGGCGCAGTCACTCCGCTGGGCAACAATGGACCGGATTCTTG
GCGACGCATCCTGGCCGGCGAGTCGGCAATTTCTCGGCTGAGTGCGGAGT
TTAAGGGCTTGCCCTGCCAGGTTGCGGCTCAAATCCCGAGGGAAAACCTA
CAGCTGGATCAACACCTGACCAAGTCGGACATTAAGCTGATGAGCCCCGC
CACGCAGCTTGCCGTATTGGCGGCTGAGGAGGCCTTGTCAACCGGAAAGC
TGTGCCCCAAGCAATTGAGCGAGGAGGAGCTTGAGCGGTTCGGAGTGTGC
GTGGGCATGGGCATGTTCGACCTTGCAGAGGTCTATGGCGCCTGGAACCA
GCTGCAACGAGGTTACAACAGAGTAAGCCCCTTTTTCGTGCCCAGGCTGC
TGCCCAGTATGGCGTGTGGTCACATAAGCATGCGACATGGCTTAAGAGGA
CCTAACCACTCGGTGTCCACGGCCTGCGCCACAGGTGCCCATGCCCTGGG
CGATGCCATGCGCTTCATTCGCAGCGGAGATGCCGACTTGATGCTGGCGG
GGAGTGGTGAGGCCTGCATAGATCCGCTCTCCATCGCTGGATTTTGCAGA
CTGCGGGCTCTGAGCACCGCATTCAACGATAATCCGGCGGTTGCGTCCAG
ACCGTTTGACAAGTCCCGGGATGGCTTCGTGATGGGCGAGGGCGCAGCTG
TGCTCTTGCTGGAAGAACTGGAGCACGCCCGCGCTCGGGGAGCTCCCATT
CTAGCTGAGATTCTGGGCTACGGCTTGTCCGGCGATGCCTATCACATAAC
GTCGCCCAGCGATGACGGCGCCGGAGCCACTCTTGCCATGAAGCGGGCCA
TACAAGATGCTGGGATTGCACCAGAGGATGTTACGTATGTAAATGCCCAC
GCAACCTCCACGCCCACCGGGGATCGCATTGAGTCACACGCTATAGGTCG
TGTTTTCGGGGCGCACACTCCGCAGGTGAGGGTCTCCTCCACCAAGGGAG
CACATGGCCACCTGCTGGGCTCCTCTGGCAACCTGGAAGCGCTCTTTGTG
GTGCTCGCCTGCGCGAATAACAAGCTGCCGCCCTCCATCAACATTGAGCA
CCTCGATGTGGACGTCAATGTGGTCACGAAAGCTACTGATTGGTCGGCGG
ACCAAAAGCGGCGTGTTGCCCTCAAGAATTCCTTCGGCTTTGGAGGAACC
AATGCCTCCCTCTGCATTGCTAGCTACATTGCAAGCTTTCTAGACCAT
BO15664.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12170-RA | 1317 | CG12170-PA | 1..1314 | 17..1330 | 6570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12170-RA | 1424 | CG12170-RA | 29..1346 | 13..1330 | 6575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:34:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5637262..5638579 | 13..1330 | 6575 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:34:45 has no hits.
BO15664.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:51:28 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 1..1317 | 17..1334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:04 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 26..1346 | 13..1334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:44 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 33..1346 | 17..1332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:51:28 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 26..1346 | 13..1334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:11 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 33..1346 | 17..1332 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:11 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5637266..5638579 | 17..1332 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:44 Download gff for
BO15664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1462988..1464301 | 17..1332 | 99 | | Plus |
BO15664.pep Sequence
Translation from 16 to 1348
> BO15664.pep
MRVLGKCTVLVRQTRSLSTPSGRRRVVVTGSGAVTPLGNNGPDSWRRILA
GESAISRLSAEFKGLPCQVAAQIPRENLQLDQHLTKSDIKLMSPATQLAV
LAAEEALSTGKLCPKQLSEEELERFGVCVGMGMFDLAEVYGAWNQLQRGY
NRVSPFFVPRLLPSMACGHISMRHGLRGPNHSVSTACATGAHALGDAMRF
IRSGDADLMLAGSGEACIDPLSIAGFCRLRALSTAFNDNPAVASRPFDKS
RDGFVMGEGAAVLLLEELEHARARGAPILAEILGYGLSGDAYHITSPSDD
GAGATLAMKRAIQDAGIAPEDVTYVNAHATSTPTGDRIESHAIGRVFGAH
TPQVRVSSTKGAHGHLLGSSGNLEALFVVLACANNKLPPSINIEHLDVDV
NVVTKATDWSADQKRRVALKNSFGFGGTNASLCIASYIASFLDH
BO15664.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12170-PA | 438 | CG12170-PA | 1..438 | 1..438 | 2251 | 100 | Plus |
| CG3523-PA | 2438 | CG3523-PA | 82..444 | 64..436 | 266 | 25.8 | Plus |
| CG3523-PC | 2540 | CG3523-PC | 184..546 | 64..436 | 266 | 25.8 | Plus |
| CG17374-PC | 2394 | CG17374-PC | 92..424 | 92..437 | 254 | 27.7 | Plus |
| v(2)k05816-PA | 2409 | CG3524-PA | 19..426 | 26..437 | 251 | 22.7 | Plus |
