BO15665.complete Sequence
1729 bp (1729 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633542
> BO15665.complete
GAAGTTATCAGTCGACATGAAGCCCACCAATAACTCAACCCTGGAGGTAA
TCTCGCCGAAAGTGCAGGTGGACGATGAGTTCATCACCACCGACTACGAT
TACCAGACATCCCATGTGAAGCGCACCGCCGATGGACAGCTCCAGGTGCA
CCCCCAGACGACGTCGCTGAAGATACGGACGGGTCGCCATGTGCCCAAGC
TGGGCGTGATGCTGGTGGGATGGGGTGGCAACAACGGATCCACGCTGACC
GCCGCCCTGGAGGCCAATCGTCGCCAGCTGAAGTGGCGCAAGCGGACGGG
CGTCCAGGAGGCCAACTGGTATGGTTCCATTACACAGGCGTCCACCGTCT
TCATTGGATCCGATGAGGACGGCGGTGACGTGTACGTGCCCATGAAGGAG
CTGCTGCCCATGGTGGAGCCCGACAACATTATCGTGGATGGCTGGGATAT
CAGTGGCCTGCATTTGGGCGACGCCATGCGCAGGGCCGAGGTCCTAGACG
TGGCTCTGCAGGATCAGATCTACGATCAGTTGGCTCAGTTGCGCCCACGT
CCATCCATCTACGACCCCGACTTCATCGCGGCCAATCAGTCGGATCGGGC
TGACAACGTGATCCGTGGCACTCGTCTGGAGCAGTACGAGCAAATCCGGA
AGGACATCCGCGACTTCCGCGAGCGCAGTGGCGTCGATTCGGTCATCGTC
CTCTGGACTGCCAACACGGAGCGCTTCGCGGATGTCCAGCCTGGTCTGAA
CACCACCAGCCAGGAGCTCATCGCCTCCCTGGAGGCCAACCACTCGGAGG
TGTCACCCTCCACGATCTTCGCAATGGCCAGCATCGCCGAGGGGTGCACC
TACATCAACGGCTCTCCGCAGAACACCTTTGTGCCCGGACTGATCCAGCT
GGCCGAGGAGAAGAATGTTTTCATTGCCGGCGATGACTTCAAGTCCGGTC
AGACCAAGATCAAGAGCGTGTTGGTAGATTTCCTGGTGGGAGCTGGTATC
AAGCCGGTGTCCATTGCCAGTTACAACCATCTGGGCAACAACGATGGCAA
GAACTTGTCCGCTCCTCAACAGTTCCGCTCCAAGGAGATTTCCAAGAGCA
ACGTGGTGGACGACATGGTTGCCTCCAACAGGCTGTTGTACGGACCCGAT
GAGCACCCCGACCACGTCGTGGTAATCAAGTACGTGCCCTATGTGGGCGA
CAGCAAGCGGGCCATGGATGAGTACACATCGGAGATCATGATGGGCGGCC
ACAACACCCTGGTGATCCACAACACCTGCGAGGACTCGCTGCTGGCCACA
CCGCTCATTCTGGACCTGGTTATCCTCGGCGAGCTGAGCACTCGCATCCA
GCTGCGCAATGCGGAGAAGGAATCCGCCCCGTGGGTTCCCTTCAAGCCAG
TGCTTTCCCTGCTGAGCTATCTGTGCAAGGCTCCACTGGTGCCCCAGGGC
TCCCAGGTGGTCAACTCGCTCTTCCGCCAGCGCGCCGCCATAGAGAATAT
CCTGCGTGGCTGCATTGGTCTGCCGCCCATCTCACACATGACCCTGGAGC
AGCGGTTCGACTTTTCTACCATTACAAATGAGCCGCCTCTAAAGAGGGTC
AAGATCCTGGGCCAGCCCTGCTCCGTGGAATCGGTCACCAATGGAAAGAA
GCTCCATGCCAATGGACACTCCAATGGGTCCGCCAAGCTGGCCACTAACG
GCAATGGTCACGCAAGCTTTCTAGACCAT
BO15665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inos-RA | 1698 | CG11143-PA | 1..1695 | 17..1711 | 8475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:25:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inos-RA | 1986 | CG11143-RA | 138..1832 | 17..1711 | 8475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:25:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7456149..7456850 | 844..143 | 3510 | 100 | Minus |
| 2R | 25286936 | 2R | 7455302..7455771 | 1555..1086 | 2350 | 100 | Minus |
| 2R | 25286936 | 2R | 7455834..7456077 | 1087..844 | 1220 | 100 | Minus |
| 2R | 25286936 | 2R | 7455076..7455232 | 1711..1555 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 7458607..7458737 | 147..17 | 655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:25:28 has no hits.
BO15665.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:49 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 1..1698 | 17..1714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:40 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 123..1821 | 9..1711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:52 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 138..1832 | 17..1713 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:49 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 123..1821 | 9..1711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:13 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 138..1832 | 17..1713 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:13 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7455073..7455231 | 1556..1713 | 98 | <- | Minus |
| 2R | 7455302..7455769 | 1088..1555 | 100 | <- | Minus |
| 2R | 7455834..7456076 | 845..1087 | 100 | <- | Minus |
| 2R | 7456149..7456847 | 146..844 | 100 | <- | Minus |
| 2R | 7458609..7458737 | 17..145 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:52 Download gff for
BO15665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3342578..3342736 | 1556..1713 | 98 | <- | Minus |
| arm_2R | 3342807..3343274 | 1088..1555 | 100 | <- | Minus |
| arm_2R | 3343339..3343581 | 845..1087 | 100 | <- | Minus |
| arm_2R | 3343654..3344352 | 146..844 | 100 | <- | Minus |
| arm_2R | 3346114..3346242 | 17..145 | 100 | | Minus |
BO15665.pep Sequence
Translation from 16 to 1729
> BO15665.pep
MKPTNNSTLEVISPKVQVDDEFITTDYDYQTSHVKRTADGQLQVHPQTTS
LKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEAN
WYGSITQASTVFIGSDEDGGDVYVPMKELLPMVEPDNIIVDGWDISGLHL
GDAMRRAEVLDVALQDQIYDQLAQLRPRPSIYDPDFIAANQSDRADNVIR
GTRLEQYEQIRKDIRDFRERSGVDSVIVLWTANTERFADVQPGLNTTSQE
LIASLEANHSEVSPSTIFAMASIAEGCTYINGSPQNTFVPGLIQLAEEKN
VFIAGDDFKSGQTKIKSVLVDFLVGAGIKPVSIASYNHLGNNDGKNLSAP
QQFRSKEISKSNVVDDMVASNRLLYGPDEHPDHVVVIKYVPYVGDSKRAM
DEYTSEIMMGGHNTLVIHNTCEDSLLATPLILDLVILGELSTRIQLRNAE
KESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCI
GLPPISHMTLEQRFDFSTITNEPPLKRVKILGQPCSVESVTNGKKLHANG
HSNGSAKLATNGNGHASFLDH
BO15665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inos-PA | 565 | CG11143-PA | 1..565 | 1..565 | 2921 | 100 | Plus |
