BO15666.complete Sequence
1099 bp (1099 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633543
> BO15666.complete
GAAGTTATCAGTCGACATGACCACGAACAGCAGCTTCTTCGATGAACACA
TCGCCATGATATACTCCAACCTGATGGACCAGTACATGCCCGAGTACTTC
AAAAGCTTTGAGTACACGCCATGGGTTTTCTCCCTGCTGGGATCGGTGGT
AATTGGACTGAGTGGCATATTCCCGCTGATCATCATTCCCACGGAGGAGA
AAATGGCTAAGGAGGGATACAAAGATCCTGCAGATTCAAAACTCCTGCGA
GTGCTTCTGAGTTTCGCGGTCGGCGGTCTGCTGGGCGATGTGTTCCTTCA
CCTGTTGCCAGAAGCCTGGGAGGGCGATAATCAAGATCCTTCTAGTCACC
CATCCCTGCGCTCGGGCCTTTGGGTACTTTCCGGCATACTGATCTTCACG
ATCGTGGAGAAAATCTTTTCCGGATATGCCAGCGCGGACGAGGAGAACCC
TCAGCCCAAGTGCGTGGAGATAGCCAACTGCCTGTTGCGTCGACATGGCG
GCCAACTACCAGAGGGCGAAACCTCTGAGAGTTGTGGCGGCGCCTGCGAC
ATCGAAGATGTAGGTAAAGTCTGTTTCCTACGCGAGCAGGAACAGAAGTC
AAAGGAAAGGAAGGAACAGCCGAAGAAGGTGGCTGGTTATCTGAACCTCT
TGGCCAACTCAATTGACAATTTCACACACGGTCTAGCCGTGGCTGGATCC
TTTTTGGTGTCCTTCAGACACGGCATTCTAGCCACTTTTGCCATATTGCT
TCATGAAATTCCGCACGAGGTGGGGGATTTCGCAATCCTGCTTCGATCCG
GATTCAGTCGCTGGGACGCCGCGCGTGCGCAACTACTCACGGCGGGAGCT
GGCCTGCTCGGTGCTCTGGTGGCCATCGGAGGCTCCGGCGTAACGTCGGC
CATGGAGGCACGTACTTCGTGGATTATGCCGTTCACCGCCGGCGGCTTTC
TGCACATTGCTCTGGTCACAGTATTACCTGATCTCTTGAAGGAGGAGGAG
CGCAAGGAGTCCATTAAGCAGCTGCTAGCACTGGTATTTGGCATTGCGTT
AATGGCCGTGATGACCATGCTATTCGAACACGCAAGCTTTCTAGACCAT
BO15666.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:03:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip99C-RJ | 1068 | CG7816-PJ | 1..1065 | 17..1081 | 5325 | 100 | Plus |
| Zip99C-RI | 1068 | CG7816-PI | 1..1065 | 17..1081 | 5325 | 100 | Plus |
| Zip99C-RH | 1068 | CG7816-PH | 1..1065 | 17..1081 | 5325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip99C-RJ | 1638 | CG7816-RJ | 314..1378 | 17..1081 | 5325 | 100 | Plus |
| Zip99C-RI | 1709 | CG7816-RI | 385..1449 | 17..1081 | 5325 | 100 | Plus |
| Zip99C-RH | 1476 | CG7816-RH | 152..1216 | 17..1081 | 5325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:03:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29864413..29864829 | 749..333 | 2085 | 100 | Minus |
| 3R | 32079331 | 3R | 29865057..29865267 | 227..17 | 1055 | 100 | Minus |
| 3R | 32079331 | 3R | 29863961..29864137 | 1081..905 | 885 | 100 | Minus |
| 3R | 32079331 | 3R | 29864195..29864350 | 905..750 | 780 | 100 | Minus |
| 3R | 32079331 | 3R | 29864889..29864996 | 335..228 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:03:22 has no hits.
BO15666.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:51 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7816-RD | 1..1068 | 17..1082 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:43 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7816-RD | 159..1242 | 9..1090 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:39 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7816-RH | 152..1216 | 17..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:51 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7816-RD | 159..1242 | 9..1090 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:51 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip99C-RH | 152..1216 | 17..1083 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:51 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29864195..29864350 | 750..905 | 100 | <- | Minus |
| 3R | 29863959..29864136 | 906..1083 | 98 | <- | Minus |
| 3R | 29864413..29864826 | 336..749 | 100 | <- | Minus |
| 3R | 29864889..29864996 | 228..335 | 100 | <- | Minus |
| 3R | 29865057..29865267 | 17..227 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:39 Download gff for
BO15666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25690611..25690718 | 228..335 | 100 | <- | Minus |
| arm_3R | 25690779..25690989 | 17..227 | 100 | | Minus |
| arm_3R | 25689917..25690072 | 750..905 | 100 | <- | Minus |
| arm_3R | 25690135..25690548 | 336..749 | 100 | <- | Minus |
| arm_3R | 25689681..25689858 | 906..1083 | 98 | <- | Minus |
BO15666.pep Sequence
Translation from 16 to 1099
> BO15666.pep
MTTNSSFFDEHIAMIYSNLMDQYMPEYFKSFEYTPWVFSLLGSVVIGLSG
IFPLIIIPTEEKMAKEGYKDPADSKLLRVLLSFAVGGLLGDVFLHLLPEA
WEGDNQDPSSHPSLRSGLWVLSGILIFTIVEKIFSGYASADEENPQPKCV
EIANCLLRRHGGQLPEGETSESCGGACDIEDVGKVCFLREQEQKSKERKE
QPKKVAGYLNLLANSIDNFTHGLAVAGSFLVSFRHGILATFAILLHEIPH
EVGDFAILLRSGFSRWDAARAQLLTAGAGLLGALVAIGGSGVTSAMEART
SWIMPFTAGGFLHIALVTVLPDLLKEEERKESIKQLLALVFGIALMAVMT
MLFEHASFLDH
BO15666.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip99C-PJ | 355 | CG7816-PJ | 1..355 | 1..355 | 1825 | 100 | Plus |
| Zip99C-PI | 355 | CG7816-PI | 1..355 | 1..355 | 1825 | 100 | Plus |
| Zip99C-PH | 355 | CG7816-PH | 1..355 | 1..355 | 1825 | 100 | Plus |
| Zip99C-PC | 355 | CG7816-PC | 1..355 | 1..355 | 1825 | 100 | Plus |
| Zip99C-PE | 355 | CG7816-PE | 1..355 | 1..355 | 1825 | 100 | Plus |
