Clone BO15669 Report

Search the DGRC for BO15669

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG31548-RA
Protein status:BO15669.pep: validated full length
Sequenced Size:802

Clone Sequence Records

BO15669.3prime Sequence

800 bp (800 high quality bases) assembled on 2006-06-02

> BO15669.3prime
ATGGTCTAGAAAGCTTGCGCGTGGGCACATGGCATGGCGACCGCCGTCCA
CCGGCAGGCTGACTCCAGTGCTGAAGCTGGCCTCATCGCTGGCCAGGAAG
GCAATGGCCGCAGCCACCTCCTTGACATCTCCAGGACGACCCAAGGCATG
GGTGGTCTTGGAGTGTTCCAGGAACTTTTTGTACGTCTCCGCATCCATGC
CGCCGCGGGCATGCAGATTGGTGACCGTCACGCCGGGATTCACGCAGTTC
ACGCGCACACCCTTGGCAGCCAGCTCCAACGCCACACAGCGGGTGAACTG
ATCCACTCCCATTTTGGATATGTTGTAGGCCAGAACGCCAGGGAAGGAGC
GAATCCCATTGACACTGGACACGTTCACGATGTTGCCCTTGGTCTTGACC
AGCTCGGGGGTGGCCAGCATAGTAAGGTGGTAGATTGCCCTCAGGTTGGT
GTTCATGACGCGGTCGTACTGCTCCAGGCTAGTCGTCTCGATGGTGCCCG
TCTCGATGATTCCGGCATTGTTGACCAGCACATCCAATTTGCCGTACTGC
TGCAGGGTTTCCGACCAAATCCTCTGGGTGTCCGCCTCCTTGGCAATGTC
GCCCACCACCAGGGCCGGCTGTGATTGGCTCACCTTGCTGCACTCAGCGG
CTACCTTCTTCAGGTTCTCCACATTGCGTCCATTGAGAGCCAGACAGGCG
CCGTACTTGGCAAACTTAATGGCGGTTGCAGCTCCGATTCCGGAGCTTGC
TCCCGTAATAAGGACCACTTTGCCCGCGAAATTCATGTCGACTGATAACT

BO15669.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-PA 771 CG31548-RA 1..768 786..19 3840 100 Minus
CG12171-PA 774 CG12171-RA 664..767 126..23 370 94.2 Minus
CG31549-PA 774 CG31549-RA 613..718 177..72 305 91.5 Minus
CG31549-PA 774 CG31549-RA 370..429 420..361 150 90 Minus
CG12171-PA 774 CG12171-RA 512..560 278..230 145 91.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:02:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-RA 952 CG31548-RA 47..815 787..19 3845 100 Minus
CG12171-RA 1014 CG12171-RA 324..832 531..23 985 79.8 Minus
CG31549-RB 991 CG31549-RB 321..832 534..23 880 78.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5636038..5636806 19..787 3845 100 Plus
3R 32079331 3R 5633950..5634458 531..23 985 79.6 Minus
Blast to na_te.dros performed on 2015-02-10 15:02:42 has no hits.

BO15669.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:41 Download gff for BO15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-PA 1..771 15..786 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:17 Download gff for BO15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-PA 1..771 15..786 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:32:54 Download gff for BO15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 40..818 15..796 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:49:16 Download gff for BO15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 40..818 15..796 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:16 Download gff for BO15669.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5636035..5636813 15..796 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:32:54 Download gff for BO15669.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1461757..1462535 15..796 99   Plus

BO15669.5prime Sequence

800 bp (800 high quality bases) assembled on 2006-05-30

> BO15669.5prime
GAAGTTATCAGTCGACATGAATTTCGCGGGCAAAGTGGTCCTTATTACGG
GAGCAAGCTCCGGAATCGGAGCTGCAACCGCCATTAAGTTTGCCAAGTAC
GGCGCCTGTCTGGCTCTCAATGGACGCAATGTGGAGAACCTGAAGAAGGT
AGCCGCTGAGTGCAGCAAGGTGAGCCAATCACAGCCGGCCCTGGTGGTGG
GCGACATTGCCAAGGAGGCGGACACCCAGAGGATTTGGTCGGAAACCCTG
CAGCAGTACGGCAAATTGGATGTGCTGGTCAACAATGCCGGAATCATCGA
GACGGGCACCATCGAGACGACTAGCCTGGAGCAGTACGACCGCGTCATGA
ACACCAACCTGAGGGCAATCTACCACCTTACTATGCTGGCCACCCCCGAG
CTGGTCAAGACCAAGGGCAACATCGTGAACGTGTCCAGTGTCAATGGGAT
TCGCTCCTTCCCTGGCGTTCTGGCCTACAACATATCCAAAATGGGAGTGG
ATCAGTTCACCCGCTGTGTGGCGTTGGAGCTGGCTGCCAAGGGTGTGCGC
GTGAACTGCGTGAATCCCGGCGTGACGGTCACCAATCTGCATGCCCGCGG
CGGCATGGATGCGGAGACGTACAAAAAGTTCCTGGAACACTCCAAGACCA
CCCATGCCTTGGGTCGTCCTGGAGATGTCAAGGAGGTGGCTGCGGCCATT
GCCTTCCTGGCCAGCGATGAGGCCAGCTTCAGCACTGGAGTCAGCCTGCC
GGTGGACGGCGGTCGCCATGCCATGTGCCCACGCGCAAGCTTTCTAGACC

BO15669.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-PA 771 CG31548-RA 1..768 17..784 3840 100 Plus
CG12171-PA 774 CG12171-RA 664..767 677..780 370 94.2 Plus
CG31549-PA 774 CG31549-RA 613..718 626..731 305 91.5 Plus
CG31549-PA 774 CG31549-RA 370..429 383..442 150 90 Plus
CG12171-PA 774 CG12171-RA 512..560 525..573 145 91.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-RA 952 CG31548-RA 47..815 16..784 3845 100 Plus
CG12171-RA 1014 CG12171-RA 324..832 272..780 985 79.8 Plus
CG31549-RB 991 CG31549-RB 321..832 269..780 880 78.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5636038..5636806 784..16 3845 100 Minus
3R 32079331 3R 5633950..5634458 272..780 985 79.6 Plus
Blast to na_te.dros performed on 2015-02-11 13:10:14 has no hits.

BO15669.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:42 Download gff for BO15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-PA 1..771 17..788 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:19 Download gff for BO15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-PA 1..771 17..788 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:07:32 Download gff for BO15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 40..818 7..788 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:43:28 Download gff for BO15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 40..818 7..788 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:43:28 Download gff for BO15669.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5636035..5636813 7..788 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:07:32 Download gff for BO15669.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1461757..1462535 7..788 99   Minus

BO15669.complete Sequence

802 bp (802 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633545

> BO15669.complete
GAAGTTATCAGTCGACATGAATTTCGCGGGCAAAGTGGTCCTTATTACGG
GAGCAAGCTCCGGAATCGGAGCTGCAACCGCCATTAAGTTTGCCAAGTAC
GGCGCCTGTCTGGCTCTCAATGGACGCAATGTGGAGAACCTGAAGAAGGT
AGCCGCTGAGTGCAGCAAGGTGAGCCAATCACAGCCGGCCCTGGTGGTGG
GCGACATTGCCAAGGAGGCGGACACCCAGAGGATTTGGTCGGAAACCCTG
CAGCAGTACGGCAAATTGGATGTGCTGGTCAACAATGCCGGAATCATCGA
GACGGGCACCATCGAGACGACTAGCCTGGAGCAGTACGACCGCGTCATGA
ACACCAACCTGAGGGCAATCTACCACCTTACTATGCTGGCCACCCCCGAG
CTGGTCAAGACCAAGGGCAACATCGTGAACGTGTCCAGTGTCAATGGGAT
TCGCTCCTTCCCTGGCGTTCTGGCCTACAACATATCCAAAATGGGAGTGG
ATCAGTTCACCCGCTGTGTGGCGTTGGAGCTGGCTGCCAAGGGTGTGCGC
GTGAACTGCGTGAATCCCGGCGTGACGGTCACCAATCTGCATGCCCGCGG
CGGCATGGATGCGGAGACGTACAAAAAGTTCCTGGAACACTCCAAGACCA
CCCATGCCTTGGGTCGTCCTGGAGATGTCAAGGAGGTGGCTGCGGCCATT
GCCTTCCTGGCCAGCGATGAGGCCAGCTTCAGCACTGGAGTCAGCCTGCC
GGTGGACGGCGGTCGCCATGCCATGTGCCCACGCGCAAGCTTTCTAGACC
AT

BO15669.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-RA 771 CG31548-PA 1..768 17..784 3840 100 Plus
CG12171-RA 774 CG12171-PA 259..767 272..780 985 79.6 Plus
CG31549-RB 774 CG31549-PB 256..767 269..780 880 78.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-RA 952 CG31548-RA 47..815 16..784 3845 100 Plus
CG12171-RA 1014 CG12171-RA 324..832 272..780 985 79.6 Plus
CG31549-RB 991 CG31549-RB 321..832 269..780 880 78.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5636038..5636806 784..16 3845 100 Minus
3R 32079331 3R 5633950..5634458 272..780 985 79.6 Plus
Blast to na_te.dros performed on 2014-11-27 10:06:42 has no hits.

BO15669.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:45:39 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 1..771 17..788 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:59:39 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 33..811 7..788 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:02 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 48..815 17..786 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:45:39 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 33..811 7..788 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:18 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG31548-RA 48..815 17..786 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:13:18 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5636036..5636805 17..786 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:02 Download gff for BO15669.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1461758..1462527 17..786 99   Minus

BO15669.pep Sequence

Translation from 16 to 802

> BO15669.pep
MNFAGKVVLITGASSGIGAATAIKFAKYGACLALNGRNVENLKKVAAECS
KVSQSQPALVVGDIAKEADTQRIWSETLQQYGKLDVLVNNAGIIETGTIE
TTSLEQYDRVMNTNLRAIYHLTMLATPELVKTKGNIVNVSSVNGIRSFPG
VLAYNISKMGVDQFTRCVALELAAKGVRVNCVNPGVTVTNLHARGGMDAE
TYKKFLEHSKTTHALGRPGDVKEVAAAIAFLASDEASFSTGVSLPVDGGR
HAMCPRASFLDH

BO15669.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:04:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31548-PA 256 CG31548-PA 1..256 1..256 1295 100 Plus
CG31549-PB 257 CG31549-PB 3..257 2..256 914 69 Plus
CG31549-PA 257 CG31549-PA 3..257 2..256 914 69 Plus
CG12171-PA 257 CG12171-PA 3..257 2..256 901 68.6 Plus
CG31546-PA 264 CG31546-PA 9..264 1..256 716 57.6 Plus