Clone BO15675 Report

Search the DGRC for BO15675

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG5854-RB
Protein status:BO15675.pep: full length peptide match
Sequenced Size:1021

Clone Sequence Records

BO15675.complete Sequence

1021 bp (1021 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633547

> BO15675.complete
GAAGTTATCAGTCGACATGGCATGGCTAAACGAGGAGCAGACGCGGGTCT
TCGAGAGCGATCGGGTGGAGTTCTGCAGCGCGAACCTAATAAACGCCGCC
TCATGCAAGGCGGCTTTTGCGCCACACCCCACCACTGGACGGGCCTGGGA
CATTGTCATCAATTGTGCGGCCGAGACGCGTGCCAACCAGGATGATGCCG
TATACAAGGAGGGTATCCTGAAGCTCAGTTTGAACTGCGCCAATGAGGCG
GCTAACCAGCGGGTCAAACGATACGTGGAACTCAGCTCTGGTTGTGTGAA
CAGCAGCGAAAAGACGCCGTTAAAAGAGGACTGCAAGACGGATCCCTGGA
CGGGCGTGGCCAAGCAGAAGCTCAAGGTGGAGAAGGAACTGGCCAACATC
GACGATCTCAGTTACACGGTCGTCCGTTTGCCCGTGGTCTATGGCATTGG
CGATAAGCGCTATTTGATGCCGCGCATTATAATCGCTGCCATATACAAAT
ACCTGAACGAGACAATGAAGCTGCTGTGGAACGATGCCATGCGTTTGAAT
ACTGTGCACGTATCGGACGTGTGCGCTGCCGTTTGGCAATTGGCTCAGAG
TCCCAAGACCGCCGGTCAGATCTACAACATCTGCGATGATTCAGCATCGA
CGCAGGGCACCATTAGTAATCTTTTAGTGGATATTTTCGACATCAATTTG
GATTTCTTCGGCCTTGTAATGTCGAATTTGGCAAAACTTTATCCCACGGA
CACCGTCAGTGAAATCAACGACAAGCACATGGCACCCTGGGCCGAGATTT
GCCAGCGCAATGGCATCGACAACACCCCGCTGACACCGTACCTAGATGAG
GAGCAGCTCCAGCACAAGCACCTCTACTTGGATAACACGAAACTGAAAGA
CTTTGGCTACGTGCTGCAGCATCCGAAAGTCACTCGCGAGCTGCTCATGG
AGATGATTAACGACTATGTGAAGCAGCAATTGTTTCCGAAATCGTTGGTT
CTTGCAAGCTTTCTAGACCAT

BO15675.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG5854-RA 1116 CG5854-PA 127..1113 17..1003 4935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG5854-RA 1562 CG5854-RA 242..1228 17..1003 4935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23934563..23934932 98..467 1850 100 Plus
3R 32079331 3R 23935029..23935297 468..736 1345 100 Plus
3R 32079331 3R 23935364..23935630 737..1003 1335 100 Plus
3R 32079331 3R 23934263..23934344 17..98 410 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:28:39 has no hits.

BO15675.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:35 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
CG5854-RB 1..990 17..1006 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:24 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
CG5854-RB 261..1254 8..1003 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:54 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
CG5854-RA 242..1228 17..1005 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:35 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
CG5854-RB 261..1254 8..1003 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:04 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
CG5854-RA 242..1228 17..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:04 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23934263..23934344 17..98 100 -> Plus
3R 23934564..23934932 99..467 100 -> Plus
3R 23935029..23935297 468..736 100 -> Plus
3R 23935364..23935630 737..1005 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:54 Download gff for BO15675.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19759985..19760066 17..98 100 -> Plus
arm_3R 19760286..19760654 99..467 100 -> Plus
arm_3R 19760751..19761019 468..736 100 -> Plus
arm_3R 19761086..19761352 737..1005 99   Plus

BO15675.pep Sequence

Translation from 16 to 1021

> BO15675.pep
MAWLNEEQTRVFESDRVEFCSANLINAASCKAAFAPHPTTGRAWDIVINC
AAETRANQDDAVYKEGILKLSLNCANEAANQRVKRYVELSSGCVNSSEKT
PLKEDCKTDPWTGVAKQKLKVEKELANIDDLSYTVVRLPVVYGIGDKRYL
MPRIIIAAIYKYLNETMKLLWNDAMRLNTVHVSDVCAAVWQLAQSPKTAG
QIYNICDDSASTQGTISNLLVDIFDINLDFFGLVMSNLAKLYPTDTVSEI
NDKHMAPWAEICQRNGIDNTPLTPYLDEEQLQHKHLYLDNTKLKDFGYVL
QHPKVTRELLMEMINDYVKQQLFPKSLVLASFLDH

BO15675.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:34:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5854-PA 371 CG5854-PA 43..371 1..329 1728 100 Plus