BO15675.complete Sequence
1021 bp (1021 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633547
> BO15675.complete
GAAGTTATCAGTCGACATGGCATGGCTAAACGAGGAGCAGACGCGGGTCT
TCGAGAGCGATCGGGTGGAGTTCTGCAGCGCGAACCTAATAAACGCCGCC
TCATGCAAGGCGGCTTTTGCGCCACACCCCACCACTGGACGGGCCTGGGA
CATTGTCATCAATTGTGCGGCCGAGACGCGTGCCAACCAGGATGATGCCG
TATACAAGGAGGGTATCCTGAAGCTCAGTTTGAACTGCGCCAATGAGGCG
GCTAACCAGCGGGTCAAACGATACGTGGAACTCAGCTCTGGTTGTGTGAA
CAGCAGCGAAAAGACGCCGTTAAAAGAGGACTGCAAGACGGATCCCTGGA
CGGGCGTGGCCAAGCAGAAGCTCAAGGTGGAGAAGGAACTGGCCAACATC
GACGATCTCAGTTACACGGTCGTCCGTTTGCCCGTGGTCTATGGCATTGG
CGATAAGCGCTATTTGATGCCGCGCATTATAATCGCTGCCATATACAAAT
ACCTGAACGAGACAATGAAGCTGCTGTGGAACGATGCCATGCGTTTGAAT
ACTGTGCACGTATCGGACGTGTGCGCTGCCGTTTGGCAATTGGCTCAGAG
TCCCAAGACCGCCGGTCAGATCTACAACATCTGCGATGATTCAGCATCGA
CGCAGGGCACCATTAGTAATCTTTTAGTGGATATTTTCGACATCAATTTG
GATTTCTTCGGCCTTGTAATGTCGAATTTGGCAAAACTTTATCCCACGGA
CACCGTCAGTGAAATCAACGACAAGCACATGGCACCCTGGGCCGAGATTT
GCCAGCGCAATGGCATCGACAACACCCCGCTGACACCGTACCTAGATGAG
GAGCAGCTCCAGCACAAGCACCTCTACTTGGATAACACGAAACTGAAAGA
CTTTGGCTACGTGCTGCAGCATCCGAAAGTCACTCGCGAGCTGCTCATGG
AGATGATTAACGACTATGTGAAGCAGCAATTGTTTCCGAAATCGTTGGTT
CTTGCAAGCTTTCTAGACCAT
BO15675.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5854-RA | 1116 | CG5854-PA | 127..1113 | 17..1003 | 4935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5854-RA | 1562 | CG5854-RA | 242..1228 | 17..1003 | 4935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23934563..23934932 | 98..467 | 1850 | 100 | Plus |
3R | 32079331 | 3R | 23935029..23935297 | 468..736 | 1345 | 100 | Plus |
3R | 32079331 | 3R | 23935364..23935630 | 737..1003 | 1335 | 100 | Plus |
3R | 32079331 | 3R | 23934263..23934344 | 17..98 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:28:39 has no hits.
BO15675.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:35 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5854-RB | 1..990 | 17..1006 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:24 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5854-RB | 261..1254 | 8..1003 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:54 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5854-RA | 242..1228 | 17..1005 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:35 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5854-RB | 261..1254 | 8..1003 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:04 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5854-RA | 242..1228 | 17..1005 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:04 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23934263..23934344 | 17..98 | 100 | -> | Plus |
3R | 23934564..23934932 | 99..467 | 100 | -> | Plus |
3R | 23935029..23935297 | 468..736 | 100 | -> | Plus |
3R | 23935364..23935630 | 737..1005 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:54 Download gff for
BO15675.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19759985..19760066 | 17..98 | 100 | -> | Plus |
arm_3R | 19760286..19760654 | 99..467 | 100 | -> | Plus |
arm_3R | 19760751..19761019 | 468..736 | 100 | -> | Plus |
arm_3R | 19761086..19761352 | 737..1005 | 99 | | Plus |
BO15675.pep Sequence
Translation from 16 to 1021
> BO15675.pep
MAWLNEEQTRVFESDRVEFCSANLINAASCKAAFAPHPTTGRAWDIVINC
AAETRANQDDAVYKEGILKLSLNCANEAANQRVKRYVELSSGCVNSSEKT
PLKEDCKTDPWTGVAKQKLKVEKELANIDDLSYTVVRLPVVYGIGDKRYL
MPRIIIAAIYKYLNETMKLLWNDAMRLNTVHVSDVCAAVWQLAQSPKTAG
QIYNICDDSASTQGTISNLLVDIFDINLDFFGLVMSNLAKLYPTDTVSEI
NDKHMAPWAEICQRNGIDNTPLTPYLDEEQLQHKHLYLDNTKLKDFGYVL
QHPKVTRELLMEMINDYVKQQLFPKSLVLASFLDH
BO15675.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:34:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5854-PA | 371 | CG5854-PA | 43..371 | 1..329 | 1728 | 100 | Plus |