Clone Sequence Records
BO15676.3prime Sequence
491 bp (491 high quality bases) assembled on 2006-06-02
> BO15676.3prime
ATGGTCTAGAAAGCTTGCCTTGGCGTTGCCGTCGTCGTCGATCGCCTTGA
AGATGATTCCGTAGACATGGTCCACCAGCTTGGCCCACGTGGCCGCTTGA
CTCTCGTCCAGACTGCAGGCAGCTGTCAGCACATCCAGGATAACTCCTTT
CAGTTGGTTGTAAGACTCCTTGGAAACGGTCCGCGGAATGTGACTAACGG
CAATTTTGGTCCAGATCTCGTCCAGCTTCTCCAGATCGCCATCCTGGCCC
AGGACCTGGATGGACTCGTCAAAGACCCTTATGATTCTGCCGGCATGTGC
TCGGAAGCGAGCATTTCCACTTAGCTCCTCCAAAGGAACATCGCGGAAGG
GGAACTTCTCCAAGTTGGACGGAAAGCGGTTGAAAAACTGCGTCAGTATC
GCCGCTCCAGAATCTGTTGGTGTTGCCACGGGGATTTCCCAGGTCTTCTT
GATCAGTTGCACCTCATCGCTGTTCATGTCGACTGATAACT
BO15676.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9734-PC | 462 | glob1-RC | 1..459 | 477..19 | 2295 | 100 | Minus |
CG9734-PB | 462 | glob1-RB | 1..459 | 477..19 | 2295 | 100 | Minus |
CG9734-PA | 462 | glob1-RA | 1..459 | 477..19 | 2295 | 100 | Minus |
CG9734-PD | 462 | glob1-RD | 1..459 | 477..19 | 2295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:34:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 921 | CG9734-RF | 101..561 | 479..19 | 2305 | 100 | Minus |
glob1-RD | 1143 | CG9734-RD | 323..783 | 479..19 | 2305 | 100 | Minus |
glob1-RA | 1274 | CG9734-RA | 454..914 | 479..19 | 2305 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:34:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15897548..15897709 | 157..318 | 810 | 100 | Plus |
3R | 32079331 | 3R | 15897774..15897935 | 318..479 | 810 | 100 | Plus |
3R | 32079331 | 3R | 15897286..15897423 | 19..156 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:34:23 has no hits.
BO15676.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:47 Download gff for
BO15676.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-PD | 1..462 | 18..477 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:26 Download gff for
BO15676.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9734-PD | 1..462 | 18..477 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:12:19 Download gff for
BO15676.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RB | 230..695 | 19..485 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:57:07 Download gff for
BO15676.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 449..914 | 19..485 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:57:07 Download gff for
BO15676.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15897286..15897423 | 19..156 | 100 | <- | Plus |
3R | 15897548..15897709 | 157..318 | 100 | <- | Plus |
3R | 15897775..15897940 | 319..485 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:12:19 Download gff for
BO15676.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11723008..11723145 | 19..156 | 100 | <- | Plus |
arm_3R | 11723270..11723431 | 157..318 | 100 | <- | Plus |
arm_3R | 11723497..11723662 | 319..485 | 98 | | Plus |
BO15676.5prime Sequence
491 bp (491 high quality bases) assembled on 2006-05-30
> BO15676.5prime
GAAGTTATCAGTCGACATGAACAGCGATGAGGTGCAACTGATCAAGAAGA
CCTGGGAAATCCCCGTGGCAACACCAACAGATTCTGGAGCGGCGATACTG
ACGCAGTTTTTCAACCGCTTTCCGTCCAACTTGGAGAAGTTCCCCTTCCG
CGATGTTCCTTTGGAGGAGCTAAGTGGAAATGCTCGCTTCCGAGCACATG
CCGGCAGAATCATAAGGGTCTTTGACGAGTCCATCCAGGTCCTGGGCCAG
GATGGCGATCTGGAGAAGCTGGACGAGATCTGGACCAAAATTGCCGTTAG
TCACATTCCGCGGACCGTTTCCAAGGAGTCTTACAACCAACTGAAAGGAG
TTATCCTGGATGTGCTGACAGCTGCCTGCAGTCTGGACGAGAGTCAAGCG
GCCACGTGGGCCAAGCTGGTGGACCATGTCTACGGAATCATCTTCAAGGC
GATCGACGACGACGGCAACGCCAAGGCAAGCTTTCTAGACC
BO15676.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9734-PC | 462 | glob1-RC | 1..459 | 17..475 | 2295 | 100 | Plus |
CG9734-PB | 462 | glob1-RB | 1..459 | 17..475 | 2295 | 100 | Plus |
CG9734-PA | 462 | glob1-RA | 1..459 | 17..475 | 2295 | 100 | Plus |
CG9734-PD | 462 | glob1-RD | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:44:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 921 | CG9734-RF | 101..561 | 15..475 | 2305 | 100 | Plus |
glob1-RD | 1143 | CG9734-RD | 323..783 | 15..475 | 2305 | 100 | Plus |
glob1-RA | 1274 | CG9734-RA | 454..914 | 15..475 | 2305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:44:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15897548..15897709 | 337..176 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897774..15897935 | 176..15 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897286..15897423 | 475..338 | 690 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:44:43 has no hits.
BO15676.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:48 Download gff for
BO15676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-PD | 1..462 | 17..476 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:27 Download gff for
BO15676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9734-PD | 1..462 | 17..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:49:58 Download gff for
BO15676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RB | 230..695 | 9..475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:03 Download gff for
BO15676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 449..914 | 9..475 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:03 Download gff for
BO15676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15897286..15897423 | 338..475 | 100 | <- | Minus |
3R | 15897548..15897709 | 176..337 | 100 | <- | Minus |
3R | 15897775..15897940 | 9..175 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:49:58 Download gff for
BO15676.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11723008..11723145 | 338..475 | 100 | <- | Minus |
arm_3R | 11723270..11723431 | 176..337 | 100 | <- | Minus |
arm_3R | 11723497..11723662 | 9..175 | 98 | | Minus |
BO15676.complete Sequence
493 bp (493 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633548
> BO15676.complete
GAAGTTATCAGTCGACATGAACAGCGATGAGGTGCAACTGATCAAGAAGA
CCTGGGAAATCCCCGTGGCAACACCAACAGATTCTGGAGCGGCGATACTG
ACGCAGTTTTTCAACCGCTTTCCGTCCAACTTGGAGAAGTTCCCCTTCCG
CGATGTTCCTTTGGAGGAGCTAAGTGGAAATGCTCGCTTCCGAGCACATG
CCGGCAGAATCATAAGGGTCTTTGACGAGTCCATCCAGGTCCTGGGCCAG
GATGGCGATCTGGAGAAGCTGGACGAGATCTGGACCAAAATTGCCGTTAG
TCACATTCCGCGGACCGTTTCCAAGGAGTCTTACAACCAACTGAAAGGAG
TTATCCTGGATGTGCTGACAGCTGCCTGCAGTCTGGACGAGAGTCAAGCG
GCCACGTGGGCCAAGCTGGTGGACCATGTCTACGGAATCATCTTCAAGGC
GATCGACGACGACGGCAACGCCAAGGCAAGCTTTCTAGACCAT
BO15676.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:51:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 462 | CG9734-PF | 1..459 | 17..475 | 2295 | 100 | Plus |
glob1-RD | 462 | CG9734-PD | 1..459 | 17..475 | 2295 | 100 | Plus |
glob1-RA | 462 | CG9734-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:51:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 921 | CG9734-RF | 101..561 | 15..475 | 2305 | 100 | Plus |
glob1-RD | 1143 | CG9734-RD | 323..783 | 15..475 | 2305 | 100 | Plus |
glob1-RA | 1274 | CG9734-RA | 454..914 | 15..475 | 2305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:51:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15897548..15897709 | 337..176 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897774..15897935 | 176..15 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897286..15897423 | 475..338 | 690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:51:54 has no hits.
BO15676.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:36 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 1..462 | 17..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:26 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RD | 320..785 | 9..475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:35 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RB | 237..695 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:36 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RD | 320..785 | 9..475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:53 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 456..914 | 17..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:28:53 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15897284..15897423 | 338..477 | 98 | <- | Minus |
3R | 15897548..15897709 | 176..337 | 100 | <- | Minus |
3R | 15897775..15897933 | 17..175 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:35 Download gff for
BO15676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11723006..11723145 | 338..477 | 98 | <- | Minus |
arm_3R | 11723270..11723431 | 176..337 | 100 | <- | Minus |
arm_3R | 11723497..11723655 | 17..175 | 100 | | Minus |
BO15676.pep Sequence
Translation from 16 to 493
> BO15676.pep
MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLE
ELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT
VSKESYNQLKGVILDVLTAACSLDESQAATWAKLVDHVYGIIFKAIDDDG
NAKASFLDH
BO15676.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-PF | 153 | CG9734-PF | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PD | 153 | CG9734-PD | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PA | 153 | CG9734-PA | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PB | 153 | CG9734-PB | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PC | 153 | CG9734-PC | 1..153 | 1..153 | 786 | 100 | Plus |