Clone BO15683 Report

Search the DGRC for BO15683

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG8360-RA
Protein status:BO15683.pep: validated full length
Sequenced Size:508

Clone Sequence Records

BO15683.3prime Sequence

506 bp (506 high quality bases) assembled on 2006-06-02

> BO15683.3prime
ATGGTCTAGAAAGCTTGCTTTTCCGTTGGCGAAGCTAAAGCCGTTGGGCA
GCAGTTGGAGAACGCTGGTGCAGAGCACCCTCAATGGAAGATTGGTCGGC
TTGGCGGCGTACAGGGGGATGTCCTTGCCGTTGACGAACTCCGAGAGGAA
CTGCCGGCAGACGCCACAAGGCGTGGTGAAGCCATTATCCTGCTGGGCCA
CCACTGCACAAGCCACAAAGTCGCGTTTGCCTTCACTGATGGCCTTGACG
GCTGCAGTGCGCTCTGCACAAATGCAGGTGGCATACGCCCCGTTTTCGAT
GTTGCAACCGGAGTATATGGTGCCATCGCTGGTCCTCAGGGCGGCTCCTA
CGGCAAAGTTACTGTACGGACAATAAGCCTGTTTTCTGGCTTCCGTGGCT
GCCAGGATGATCTCTTGAATCGAAGGATCCAGGCTCTGGAATTCCCGTAC
ATTGAGATCGTCTCTGGCACCATTGATAAACACCTGTGTCATGTCGACTG
ATAACT

BO15683.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-PA 477 CG8360-RA 1..474 492..19 2370 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-RC 787 CG8360-RC 175..649 493..19 2375 100 Minus
CG8360-RA 714 CG8360-RA 102..576 493..19 2375 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8213778..8213997 238..19 1100 100 Minus
2L 23513712 2L 8213336..8213529 429..236 970 100 Minus
2L 23513712 2L 8213218..8213282 493..429 325 100 Minus
Blast to na_te.dros performed on 2015-02-10 16:13:14 has no hits.

BO15683.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:56 Download gff for BO15683.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-PA 1..477 18..492 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:37 Download gff for BO15683.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-PA 1..477 18..492 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:58:36 Download gff for BO15683.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 102..576 19..493 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:44:46 Download gff for BO15683.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 102..576 19..493 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:44:46 Download gff for BO15683.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8213781..8213997 19..235 100   Minus
2L 8213218..8213282 429..493 100 -> Minus
2L 8213337..8213529 236..428 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:58:36 Download gff for BO15683.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8213218..8213282 429..493 100 -> Minus
arm_2L 8213337..8213529 236..428 100 -> Minus
arm_2L 8213781..8213997 19..235 100   Minus

BO15683.5prime Sequence

506 bp (506 high quality bases) assembled on 2006-05-30

> BO15683.5prime
GAAGTTATCAGTCGACATGACACAGGTGTTTATCAATGGTGCCAGAGACG
ATCTCAATGTACGGGAATTCCAGAGCCTGGATCCTTCGATTCAAGAGATC
ATCCTGGCAGCCACGGAAGCCAGAAAACAGGCTTATTGTCCGTACAGTAA
CTTTGCCGTAGGAGCCGCCCTGAGGACCAGCGATGGCACCATATACTCCG
GTTGCAACATCGAAAACGGGGCGTATGCCACCTGCATTTGTGCAGAGCGC
ACTGCAGCCGTCAAGGCCATCAGTGAAGGCAAACGCGACTTTGTGGCTTG
TGCAGTGGTGGCCCAGCAGGATAATGGCTTCACCACGCCTTGTGGCGTCT
GCCGGCAGTTCCTCTCGGAGTTCGTCAACGGCAAGGACATCCCCCTGTAC
GCCGCCAAGCCGACCAATCTTCCATTGAGGGTGCTCTGCACCAGCGTTCT
CCAACTGCTGCCCAACGGCTTTAGCTTCGCCAACGGAAAAGCAAGCTTTC
TAGACC

BO15683.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-PA 477 CG8360-RA 1..474 17..490 2370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-RC 787 CG8360-RC 175..649 16..490 2375 100 Plus
CG8360-RA 714 CG8360-RA 102..576 16..490 2375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8213778..8213997 271..490 1100 100 Plus
2L 23513712 2L 8213336..8213529 80..273 970 100 Plus
2L 23513712 2L 8213218..8213282 16..80 325 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:25:09 has no hits.

BO15683.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:57 Download gff for BO15683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-PA 1..477 17..491 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:38 Download gff for BO15683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-PA 1..477 17..491 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:32:49 Download gff for BO15683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 102..576 16..490 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:28:54 Download gff for BO15683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 102..576 16..490 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:28:54 Download gff for BO15683.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8213218..8213282 16..80 100 -> Plus
2L 8213337..8213529 81..273 100 -> Plus
2L 8213781..8213997 274..490 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:32:49 Download gff for BO15683.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8213218..8213282 16..80 100 -> Plus
arm_2L 8213337..8213529 81..273 100 -> Plus
arm_2L 8213781..8213997 274..490 100   Plus

BO15683.complete Sequence

508 bp (508 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633550

> BO15683.complete
GAAGTTATCAGTCGACATGACACAGGTGTTTATCAATGGTGCCAGAGACG
ATCTCAATGTACGGGAATTCCAGAGCCTGGATCCTTCGATTCAAGAGATC
ATCCTGGCAGCCACGGAAGCCAGAAAACAGGCTTATTGTCCGTACAGTAA
CTTTGCCGTAGGAGCCGCCCTGAGGACCAGCGATGGCACCATATACTCCG
GTTGCAACATCGAAAACGGGGCGTATGCCACCTGCATTTGTGCAGAGCGC
ACTGCAGCCGTCAAGGCCATCAGTGAAGGCAAACGCGACTTTGTGGCTTG
TGCAGTGGTGGCCCAGCAGGATAATGGCTTCACCACGCCTTGTGGCGTCT
GCCGGCAGTTCCTCTCGGAGTTCGTCAACGGCAAGGACATCCCCCTGTAC
GCCGCCAAGCCGACCAATCTTCCATTGAGGGTGCTCTGCACCAGCGTTCT
CCAACTGCTGCCCAACGGCTTTAGCTTCGCCAACGGAAAAGCAAGCTTTC
TAGACCAT

BO15683.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:37:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-RC 477 CG8360-PC 1..474 17..490 2370 100 Plus
CG8360-RA 477 CG8360-PA 1..474 17..490 2370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:37:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-RC 787 CG8360-RC 175..649 16..490 2375 100 Plus
CG8360-RA 714 CG8360-RA 102..576 16..490 2375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8213778..8213997 271..490 1100 100 Plus
2L 23513712 2L 8213336..8213529 80..273 970 100 Plus
2L 23513712 2L 8213218..8213282 16..80 325 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:37:35 has no hits.

BO15683.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:39 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 1..477 17..491 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:29 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 40..514 16..490 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:52:31 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 103..572 17..486 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:39 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 40..514 16..490 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:22:47 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 103..572 17..486 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:22:47 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8213337..8213529 81..273 100 -> Plus
2L 8213781..8213993 274..486 100   Plus
2L 8213219..8213282 17..80 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:52:31 Download gff for BO15683.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8213781..8213993 274..486 100   Plus
arm_2L 8213219..8213282 17..80 100 -> Plus
arm_2L 8213337..8213529 81..273 100 -> Plus

BO15683.pep Sequence

Translation from 16 to 508

> BO15683.pep
MTQVFINGARDDLNVREFQSLDPSIQEIILAATEARKQAYCPYSNFAVGA
ALRTSDGTIYSGCNIENGAYATCICAERTAAVKAISEGKRDFVACAVVAQ
QDNGFTTPCGVCRQFLSEFVNGKDIPLYAAKPTNLPLRVLCTSVLQLLPN
GFSFANGKASFLDH

BO15683.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-PC 158 CG8360-PC 1..158 1..158 822 100 Plus
CG8360-PA 158 CG8360-PA 1..158 1..158 822 100 Plus
CG8353-PB 170 CG8353-PB 1..165 1..152 379 49.4 Plus
CG8353-PA 170 CG8353-PA 1..165 1..152 379 49.4 Plus
CG8349-PA 264 CG8349-PA 124..261 26..153 317 50.4 Plus