Clone BO15685 Report

Search the DGRC for BO15685

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:85
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO15685.pep: validated not full length
Sequenced Size:748

Clone Sequence Records

BO15685.3prime Sequence

746 bp (746 high quality bases) assembled on 2006-06-02

> BO15685.3prime
ATGGTCTAGAAAGCTTGCCAGCAGCTTTTCAATGTCCTTGGCGATGTCCA
TGGGATCGGTGGTCGGGGCATATCGGTTGATGGGCACGCCCTCCTTGTTC
ACCAGAAACTTGGTGAAGTTCCACTTGATTCCGCTGCCCAGGGTGCCGGT
CTGCTTGGCCTTTAGGTATTTGTACAGCGGCGCCGCATTGTCTCCATTCA
CATCGACCTTGGCGAACACCTCGCCGATGTCAGCCTTGGAGTCGCGCAGG
TGGCACACCATGGCCTCTCCATCGGCCTCCGGCATCTGGGACCCAAACTG
ATTGCACGGGAAGTTGAGGATCACCAGGCCGCGCTCGCCGTACTTCTCCT
TTAGATCCGTCAGCTTCTCGTAGTTGTTCTTGGTCAGGCCGCACTTGGAG
GCGATGTTCACCACCAGGACCACCTTGCCCTTGTACTTTTCCAGGGAAAC
ATCGTTGCCATGGGTATCCTTCACGGTGAACTCGTAGATCGAGGCGGCGT
TCTTGTAATCTCCGTTAGCAGACATGTCGATGGCAGCTGCTGTGGAGTGC
TGGGCGGCTGAGGAGATGGCGTTCATGGGCGTGGCCGCACAGCTCACGGG
AAGCATGATGGTGCAGAGGCGAAGGCACTGCCTCTGACCGCGACTCAGCT
CGAGGAAGGGGCCAGGGGTCCGCCTCATCGAGTAGCACCTGAGGGCCTGG
CGGGAAATGTTCTGAAACTGCCTGAGACTCATGTCGACTGATAACT

BO15685.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG12013-PD 717 PHGPx-RD 1..714 732..19 3545 99.8 Minus
CG12013-PC 597 PHGPx-RC 82..594 531..19 2565 100 Minus
CG12013-PB 510 PHGPx-RB 1..507 525..19 2535 100 Minus
CG12013-PA 510 PHGPx-RA 1..507 525..19 2535 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:05:06
Subject Length Description Subject Range Query Range Score Percent Strand
PHGPx-RD 1014 CG12013-RD 114..827 732..19 3555 99.9 Minus
PHGPx-RA 803 CG12013-RA 104..616 531..19 2565 100 Minus
PHGPx-RC 1148 CG12013-RC 449..961 531..19 2565 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3327860..3328185 531..206 1630 100 Minus
3L 28110227 3L 3327353..3327553 732..532 990 99.5 Minus
3L 28110227 3L 3328249..3328439 209..19 955 100 Minus
Blast to na_te.dros performed on 2015-02-11 12:05:03 has no hits.

BO15685.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:58 Download gff for BO15685.3prime
Subject Subject Range Query Range Percent Splice Strand
PHGPx-PD 1..717 18..732 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:39 Download gff for BO15685.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12013-PD 1..717 18..732 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:49:33 Download gff for BO15685.3prime
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 112..827 19..735 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:24:32 Download gff for BO15685.3prime
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 112..827 19..735 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:24:32 Download gff for BO15685.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 3328251..3328439 19..207 100   Minus
3L 3327351..3327553 532..735 99 -> Minus
3L 3327860..3328183 208..531 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:49:33 Download gff for BO15685.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3327351..3327553 532..735 99 -> Minus
arm_3L 3327860..3328183 208..531 100 -> Minus
arm_3L 3328251..3328439 19..207 100   Minus

BO15685.5prime Sequence

746 bp (746 high quality bases) assembled on 2006-05-30

> BO15685.5prime
GAAGTTATCAGTCGACATGAGTCTCAGGCAGTTTCAGAACATTTCCCGCC
AGGCCCTCAGGTGCTACTCGATGAGGCGGACCCCTGGCCCCTTCCTCGAG
CTGAGTCGCGGTCAGAGGCAGTGCCTTCGCCTCTGCACCATCATGCTTCC
CGTGAGCTGTGCGGCCACGCCCATGAACGCCATCTCCTCAGCCGCCCAGC
ACTCCACAGCAGCTGCCATCGACATGTCTGCTAACGGAGATTACAAGAAC
GCCGCCTCGATCTACGAGTTCACCGTGAAGGATACCCATGGCAACGATGT
TTCCCTGGAAAAGTACAAGGGCAAGGTGGTCCTGGTGGTGAACATCGCCT
CCAAGTGCGGCCTGACCAAGAACAACTACGAGAAGCTGACGGATCTAAAG
GAGAAGTACGGCGAGCGCGGCCTGGTGATCCTCAACTTCCCGTGCAATCA
GTTTGGGTCCCAGATGCCGGAGGCCGATGGAGAGGCCATGGTGTGCCACC
TGCGCGACTCCAAGGCTGACATCGGCGAGGTGTTCGCCAAGGTCGATGTG
AATGGAGACAATGCGGCGCCGCTGTACAAATACCTAAAGGCCAAGCAGAC
CGGCACCCTGGGCAGCGGAATCAAGTGGAACTTCACCAAGTTTCTGGTGA
ACAAGGAGGGCGTGCCCATCAACCGATATGCCCCGACCACCGATCCCATG
GACATCGCCAAGGACATTGAANAGCTGCTGGCAAGCTTTCTAGACC

BO15685.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG12013-PD 717 PHGPx-RD 1..714 17..730 3526 99.7 Plus
CG12013-PC 597 PHGPx-RC 82..594 218..730 2546 99.8 Plus
CG12013-PB 510 PHGPx-RB 1..507 224..730 2516 99.8 Plus
CG12013-PA 510 PHGPx-RA 1..507 224..730 2516 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
PHGPx-RD 1014 CG12013-RD 114..827 17..730 3544 99.7 Plus
PHGPx-RA 803 CG12013-RA 104..616 218..730 2554 99.8 Plus
PHGPx-RC 1148 CG12013-RC 449..961 218..730 2554 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3327860..3328185 218..543 1630 100 Plus
3L 28110227 3L 3327353..3327553 17..217 990 99.5 Plus
3L 28110227 3L 3328249..3328439 540..730 944 99.5 Plus
Blast to na_te.dros performed on 2015-02-11 09:33:47 has no hits.

BO15685.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:52:59 Download gff for BO15685.5prime
Subject Subject Range Query Range Percent Splice Strand
PHGPx-PD 1..717 17..731 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:41 Download gff for BO15685.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12013-PD 1..717 17..731 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:00:31 Download gff for BO15685.5prime
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 112..827 14..730 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:04:52 Download gff for BO15685.5prime
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 112..827 14..730 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:04:52 Download gff for BO15685.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3327860..3328183 218..541 100 -> Plus
3L 3328251..3328439 542..730 99   Plus
3L 3327351..3327553 14..217 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:00:31 Download gff for BO15685.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3327351..3327553 14..217 99 -> Plus
arm_3L 3327860..3328183 218..541 100 -> Plus
arm_3L 3328251..3328439 542..730 99   Plus

BO15685.complete Sequence

748 bp (748 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633551

> BO15685.complete
GAAGTTATCAGTCGACATGAGTCTCAGGCAGTTTCAGAACATTTCCCGCC
AGGCCCTCAGGTGCTACTCGATGAGGCGGACCCCTGGCCCCTTCCTCGAG
CTGAGTCGCGGTCAGAGGCAGTGCCTTCGCCTCTGCACCATCATGCTTCC
CGTGAGCTGTGCGGCCACGCCCATGAACGCCATCTCCTCAGCCGCCCAGC
ACTCCACAGCAGCTGCCATCGACATGTCTGCTAACGGAGATTACAAGAAC
GCCGCCTCGATCTACGAGTTCACCGTGAAGGATACCCATGGCAACGATGT
TTCCCTGGAAAAGTACAAGGGCAAGGTGGTCCTGGTGGTGAACATCGCCT
CCAAGTGCGGCCTGACCAAGAACAACTACGAGAAGCTGACGGATCTAAAG
GAGAAGTACGGCGAGCGCGGCCTGGTGATCCTCAACTTCCCGTGCAATCA
GTTTGGGTCCCAGATGCCGGAGGCCGATGGAGAGGCCATGGTGTGCCACC
TGCGCGACTCCAAGGCTGACATCGGCGAGGTGTTCGCCAAGGTCGATGTG
AATGGAGACAATGCGGCGCCGCTGTACAAATACCTAAAGGCCAAGCAGAC
CGGCACCCTGGGCAGCGGAATCAAGTGGAACTTCACCAAGTTTCTGGTGA
ACAAGGAGGGCGTGCCCATCAACCGATATGCCCCGACCACCGATCCCATG
GACATCGCCAAGGACATTGAAAAGCTGCTGGCAAGCTTTCTAGACCAT

BO15685.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
PHGPx-RD 717 CG12013-PD 1..714 17..730 3555 99.9 Plus
PHGPx-RC 597 CG12013-PC 82..594 218..730 2565 100 Plus
PHGPx-RA 510 CG12013-PA 1..507 224..730 2535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
PHGPx-RD 1014 CG12013-RD 114..827 17..730 3555 99.9 Plus
PHGPx-RA 803 CG12013-RA 104..616 218..730 2565 100 Plus
PHGPx-RC 1148 CG12013-RC 449..961 218..730 2565 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3327860..3328185 218..543 1630 100 Plus
3L 28110227 3L 3327353..3327553 17..217 990 99.5 Plus
3L 28110227 3L 3328249..3328439 540..730 955 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:57:22 has no hits.

BO15685.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:40 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 1..717 17..731 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:31 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 80..795 14..730 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:36 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 114..827 17..732 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:40 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 80..795 14..730 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:41 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
PHGPx-RD 114..827 17..732 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:41 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3327860..3328183 218..541 100 -> Plus
3L 3328251..3328439 542..732 98   Plus
3L 3327353..3327553 17..217 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:36 Download gff for BO15685.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3327353..3327553 17..217 99 -> Plus
arm_3L 3327860..3328183 218..541 100 -> Plus
arm_3L 3328251..3328439 542..732 98   Plus

BO15685.pep Sequence

Translation from 16 to 748

> BO15685.pep
MSLRQFQNISRQALRCYSMRRTPGPFLELSRGQRQCLRLCTIMLPVSCAA
TPMNAISSAAQHSTAAAIDMSANGDYKNAASIYEFTVKDTHGNDVSLEKY
KGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFPCNQFGSQM
PEADGEAMVCHLRDSKADIGEVFAKVDVNGDNAAPLYKYLKAKQTGTLGS
GIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDIEKLLASFLDH

BO15685.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
PHGPx-PD 238 CG12013-PD 1..238 1..238 1232 99.6 Plus
PHGPx-PC 198 CG12013-PC 28..198 68..238 897 100 Plus
PHGPx-PA 169 CG12013-PA 1..169 70..238 887 100 Plus
CG15116-PA 193 CG15116-PA 33..191 75..238 403 50.6 Plus