Clone BO15693 Report

Search the DGRC for BO15693

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptPect-RD
Protein status:BO15693.pep: validated full length
Sequenced Size:1177

Clone Sequence Records

BO15693.complete Sequence

1177 bp (1177 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633554

> BO15693.complete
GAAGTTATCAGTCGACATGGAGGCAAATGGCGATACCAGCGCCTGCAATG
GGTATTCGGACAAGCAGCGGAAGGATGTGCGCGTCTGGTGCGATGGATGC
TATGATATGGTACACTTCGGACATGCCAATTCTCTGCGACAAGCCAAGGC
TCTTGGCGATAAGGTAATTGTGGGCATTCACACCGACGAGGAGATCACCA
AGCACAAGGGACCACCGGTCTTCACCGAGGAGGAGCGCGTCAAGATGGTC
AAGGGCATCAAATGGGTGGATGAGGTGGTGCTCGGTGCTCCGTATGTGAC
CACACTGGATGTGCTCGACCAGAACAACTGTGATTTCTGTGTGCATGGAG
ATGACATTACAATGACAGCCGAAGGAGTGGACACATATCATTTGGTCAAA
TCAGCCAATCGCTACAAGGAAGTGAAACGCACAGCTGGAGTCTCGACCAC
TGACCTTGTGGGCCGCATGTTGCTCCTGACACGCAACCACTTCCGTCAAG
GATCCGCGGAATATGATATCGAGAAAGAAGGTTCTTCGAACATGGGTCAA
GATTCGGCAGCCAAAAGTCCGTGGACCGGTTGTAGTCAGTTCTTGCCGAC
TACCCAAAAGATCATACAGTTCAGTGATGGAAAGTCACCGAATCCCGGCG
ATAAGATTGTTTATGTGGCTGGCGCCTTCGATCTCTTCCATGTGGGTCAC
CTGGACTTTCTGGAAAAGGCTAAGAAACTGGGTGACTATCTGATTGTTGG
CCTGCACACAGATCCCGTGGTGAACTCCTACAAGGGCAGCAACTATCCCA
TTATGAATCTGCACGAGCGCGTGCTCAGTGTTTTGGCCTGCAAGTTTGTC
AATGAGGTAGTAATCGGAGCTCCCTACTGTGTCACTGAAGAGCTGCTTGA
GCACTTCAAAATCGATGTTGTCTGTCATGGACGCACACCCATTGCGCTTG
AGAATGGCAAGATCGATCCATATGCCGTTCCCAAGACGCGAGCCATCTTT
GAGCTGATCGATTCCGGCAACGAGATGACCACGGAGCGCATCGTGGAGCG
CATCATCTCGCACCGACTGGAATATGAGCGTCGCAATCAGGCCAAAGAAA
AGAAGGAAATCGAAGCCTTTGAGGCACTTCAACGCCAAAAACAGACCCAA
AAGGCCGGCGCAAGCTTTCTAGACCAT

BO15693.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
Pect-RD 1146 CG5547-PD 1..1143 17..1159 5715 100 Plus
Pect-RC 1125 CG5547-PC 1..1122 17..1159 5365 98.2 Plus
Pect-RB 1182 CG5547-PB 549..1179 529..1159 3155 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
Pect-RD 2174 CG5547-RD 429..1571 17..1159 5715 100 Plus
Pect-RC 2153 CG5547-RC 429..1550 17..1159 5365 98.2 Plus
Pect-RB 2210 CG5547-RB 977..1607 529..1159 3155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13209909..13210225 843..1159 1585 100 Plus
2L 23513712 2L 13208109..13208360 99..350 1260 100 Plus
2L 23513712 2L 13209660..13209845 659..844 930 100 Plus
2L 23513712 2L 13209470..13209601 529..660 660 100 Plus
2L 23513712 2L 13208665..13208779 418..532 575 100 Plus
2L 23513712 2L 13204190..13204272 17..99 415 100 Plus
2L 23513712 2L 13208419..13208488 349..418 350 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:50:16 has no hits.

BO15693.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:45 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
Pect-RD 1..1146 17..1160 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:37 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
Pect-RD 412..1569 7..1165 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:47 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
Pect-RD 429..1571 17..1161 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:45 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
Pect-RD 412..1569 7..1165 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:51 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
Pect-RD 429..1571 17..1161 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:51 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13209660..13209845 659..844 100 -> Plus
2L 13208110..13208360 100..350 100 -> Plus
2L 13204190..13204272 17..99 100 -> Plus
2L 13208421..13208487 351..417 100 -> Plus
2L 13208665..13208777 418..530 100 -> Plus
2L 13209472..13209599 531..658 100 -> Plus
2L 13209911..13210225 845..1161 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:47 Download gff for BO15693.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13208665..13208777 418..530 100 -> Plus
arm_2L 13209472..13209599 531..658 100 -> Plus
arm_2L 13208110..13208360 100..350 100 -> Plus
arm_2L 13208421..13208487 351..417 100 -> Plus
arm_2L 13209660..13209845 659..844 100 -> Plus
arm_2L 13204190..13204272 17..99 100 -> Plus
arm_2L 13209911..13210225 845..1161 99   Plus

BO15693.pep Sequence

Translation from 16 to 1177

> BO15693.pep
MEANGDTSACNGYSDKQRKDVRVWCDGCYDMVHFGHANSLRQAKALGDKV
IVGIHTDEEITKHKGPPVFTEEERVKMVKGIKWVDEVVLGAPYVTTLDVL
DQNNCDFCVHGDDITMTAEGVDTYHLVKSANRYKEVKRTAGVSTTDLVGR
MLLLTRNHFRQGSAEYDIEKEGSSNMGQDSAAKSPWTGCSQFLPTTQKII
QFSDGKSPNPGDKIVYVAGAFDLFHVGHLDFLEKAKKLGDYLIVGLHTDP
VVNSYKGSNYPIMNLHERVLSVLACKFVNEVVIGAPYCVTEELLEHFKID
VVCHGRTPIALENGKIDPYAVPKTRAIFELIDSGNEMTTERIVERIISHR
LEYERRNQAKEKKEIEAFEALQRQKQTQKAGASFLDH

BO15693.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
Pect-PD 381 CG5547-PD 1..381 1..381 2013 100 Plus
Pect-PB 393 CG5547-PB 1..393 1..381 1990 96.9 Plus
Pect-PC 374 CG5547-PC 1..374 1..381 1959 98.2 Plus
Pect-PE 371 CG5547-PE 1..371 1..381 1942 97.4 Plus
Cct2-PA 381 CG18330-PA 74..212 16..152 227 39.3 Plus