BO15693.complete Sequence
1177 bp (1177 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633554
> BO15693.complete
GAAGTTATCAGTCGACATGGAGGCAAATGGCGATACCAGCGCCTGCAATG
GGTATTCGGACAAGCAGCGGAAGGATGTGCGCGTCTGGTGCGATGGATGC
TATGATATGGTACACTTCGGACATGCCAATTCTCTGCGACAAGCCAAGGC
TCTTGGCGATAAGGTAATTGTGGGCATTCACACCGACGAGGAGATCACCA
AGCACAAGGGACCACCGGTCTTCACCGAGGAGGAGCGCGTCAAGATGGTC
AAGGGCATCAAATGGGTGGATGAGGTGGTGCTCGGTGCTCCGTATGTGAC
CACACTGGATGTGCTCGACCAGAACAACTGTGATTTCTGTGTGCATGGAG
ATGACATTACAATGACAGCCGAAGGAGTGGACACATATCATTTGGTCAAA
TCAGCCAATCGCTACAAGGAAGTGAAACGCACAGCTGGAGTCTCGACCAC
TGACCTTGTGGGCCGCATGTTGCTCCTGACACGCAACCACTTCCGTCAAG
GATCCGCGGAATATGATATCGAGAAAGAAGGTTCTTCGAACATGGGTCAA
GATTCGGCAGCCAAAAGTCCGTGGACCGGTTGTAGTCAGTTCTTGCCGAC
TACCCAAAAGATCATACAGTTCAGTGATGGAAAGTCACCGAATCCCGGCG
ATAAGATTGTTTATGTGGCTGGCGCCTTCGATCTCTTCCATGTGGGTCAC
CTGGACTTTCTGGAAAAGGCTAAGAAACTGGGTGACTATCTGATTGTTGG
CCTGCACACAGATCCCGTGGTGAACTCCTACAAGGGCAGCAACTATCCCA
TTATGAATCTGCACGAGCGCGTGCTCAGTGTTTTGGCCTGCAAGTTTGTC
AATGAGGTAGTAATCGGAGCTCCCTACTGTGTCACTGAAGAGCTGCTTGA
GCACTTCAAAATCGATGTTGTCTGTCATGGACGCACACCCATTGCGCTTG
AGAATGGCAAGATCGATCCATATGCCGTTCCCAAGACGCGAGCCATCTTT
GAGCTGATCGATTCCGGCAACGAGATGACCACGGAGCGCATCGTGGAGCG
CATCATCTCGCACCGACTGGAATATGAGCGTCGCAATCAGGCCAAAGAAA
AGAAGGAAATCGAAGCCTTTGAGGCACTTCAACGCCAAAAACAGACCCAA
AAGGCCGGCGCAAGCTTTCTAGACCAT
BO15693.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pect-RD | 1146 | CG5547-PD | 1..1143 | 17..1159 | 5715 | 100 | Plus |
Pect-RC | 1125 | CG5547-PC | 1..1122 | 17..1159 | 5365 | 98.2 | Plus |
Pect-RB | 1182 | CG5547-PB | 549..1179 | 529..1159 | 3155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pect-RD | 2174 | CG5547-RD | 429..1571 | 17..1159 | 5715 | 100 | Plus |
Pect-RC | 2153 | CG5547-RC | 429..1550 | 17..1159 | 5365 | 98.2 | Plus |
Pect-RB | 2210 | CG5547-RB | 977..1607 | 529..1159 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13209909..13210225 | 843..1159 | 1585 | 100 | Plus |
2L | 23513712 | 2L | 13208109..13208360 | 99..350 | 1260 | 100 | Plus |
2L | 23513712 | 2L | 13209660..13209845 | 659..844 | 930 | 100 | Plus |
2L | 23513712 | 2L | 13209470..13209601 | 529..660 | 660 | 100 | Plus |
2L | 23513712 | 2L | 13208665..13208779 | 418..532 | 575 | 100 | Plus |
2L | 23513712 | 2L | 13204190..13204272 | 17..99 | 415 | 100 | Plus |
2L | 23513712 | 2L | 13208419..13208488 | 349..418 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:50:16 has no hits.
BO15693.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:45 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pect-RD | 1..1146 | 17..1160 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:37 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pect-RD | 412..1569 | 7..1165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:47 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pect-RD | 429..1571 | 17..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:45 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pect-RD | 412..1569 | 7..1165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:51 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pect-RD | 429..1571 | 17..1161 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:51 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13209660..13209845 | 659..844 | 100 | -> | Plus |
2L | 13208110..13208360 | 100..350 | 100 | -> | Plus |
2L | 13204190..13204272 | 17..99 | 100 | -> | Plus |
2L | 13208421..13208487 | 351..417 | 100 | -> | Plus |
2L | 13208665..13208777 | 418..530 | 100 | -> | Plus |
2L | 13209472..13209599 | 531..658 | 100 | -> | Plus |
2L | 13209911..13210225 | 845..1161 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:47 Download gff for
BO15693.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13208665..13208777 | 418..530 | 100 | -> | Plus |
arm_2L | 13209472..13209599 | 531..658 | 100 | -> | Plus |
arm_2L | 13208110..13208360 | 100..350 | 100 | -> | Plus |
arm_2L | 13208421..13208487 | 351..417 | 100 | -> | Plus |
arm_2L | 13209660..13209845 | 659..844 | 100 | -> | Plus |
arm_2L | 13204190..13204272 | 17..99 | 100 | -> | Plus |
arm_2L | 13209911..13210225 | 845..1161 | 99 | | Plus |
BO15693.pep Sequence
Translation from 16 to 1177
> BO15693.pep
MEANGDTSACNGYSDKQRKDVRVWCDGCYDMVHFGHANSLRQAKALGDKV
IVGIHTDEEITKHKGPPVFTEEERVKMVKGIKWVDEVVLGAPYVTTLDVL
DQNNCDFCVHGDDITMTAEGVDTYHLVKSANRYKEVKRTAGVSTTDLVGR
MLLLTRNHFRQGSAEYDIEKEGSSNMGQDSAAKSPWTGCSQFLPTTQKII
QFSDGKSPNPGDKIVYVAGAFDLFHVGHLDFLEKAKKLGDYLIVGLHTDP
VVNSYKGSNYPIMNLHERVLSVLACKFVNEVVIGAPYCVTEELLEHFKID
VVCHGRTPIALENGKIDPYAVPKTRAIFELIDSGNEMTTERIVERIISHR
LEYERRNQAKEKKEIEAFEALQRQKQTQKAGASFLDH
BO15693.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pect-PD | 381 | CG5547-PD | 1..381 | 1..381 | 2013 | 100 | Plus |
Pect-PB | 393 | CG5547-PB | 1..393 | 1..381 | 1990 | 96.9 | Plus |
Pect-PC | 374 | CG5547-PC | 1..374 | 1..381 | 1959 | 98.2 | Plus |
Pect-PE | 371 | CG5547-PE | 1..371 | 1..381 | 1942 | 97.4 | Plus |
Cct2-PA | 381 | CG18330-PA | 74..212 | 16..152 | 227 | 39.3 | Plus |